Abstract: This invention provides transcription regulatory control sequences, the activity of which function as biomarkers for a variety of biological responses. This invention also provides expression constructs in which a biomarker transcription regulatory sequence is operably linked with a sequence for a reporter. Cells that comprise these expression constructs can be used in assays to identify conditions that modulate activity of the biological response.
Type:
Grant
Filed:
July 13, 2014
Date of Patent:
May 30, 2017
Assignee:
SWITCHGEAR GENOMICS, INC.
Inventors:
Shelley Force Aldred, Nathan D. Trinklein, Michael Rose, Patrick Collins
Abstract: This invention provides transcription regulatory control sequences, the activity of which function as biomarkers for a variety of biological responses. This invention also provides expression constructs in which a biomarker transcription regulatory sequence is operably linked with a sequence for a reporter. Cells that comprise these expression constructs can be used in assays to identify conditions that modulate activity of the biological response.
Type:
Application
Filed:
July 13, 2014
Publication date:
December 11, 2014
Applicant:
SWITCHGEAR GENOMICS, INC.
Inventors:
Shelley Force Aldred, Nathan D. Trinklein, Michael Rose, Patrick Collins
Abstract: This invention provides transcription regulatory control sequences, the activity of which function as biomarkers for a variety of biological responses. This invention also provides expression constructs in which a biomarker transcription regulatory sequence is operably linked with a sequence for a reporter. Cells that comprise these expression constructs can be used in assays to identify conditions that modulate activity of the biological response.
Type:
Grant
Filed:
September 16, 2009
Date of Patent:
August 26, 2014
Assignee:
SwitchGear Genomics, Inc.
Inventors:
Shelley Force Aldred, Nathan D. Trinklein, Michael Rose, Patrick Collins
Abstract: This invention provides transcription regulatory control sequences, the activity of which function as biomarkers for a variety of biological responses. This invention also provides expression constructs in which a biomarker transcription regulatory sequence is operably linked with a sequence for a reporter. Cells that comprise these expression constructs can be used in assays to identify conditions that modulate activity of the biological response.
Type:
Application
Filed:
September 16, 2009
Publication date:
March 17, 2011
Applicant:
SwitchGear Genomics, Inc., a Delaware Corporation
Inventors:
Shelley Force Aldred, Michael Rose, Patrick Collins, Nathan D. Trinklein
Abstract: The present invention provides compositions, kits, assemblies, libraries, arrays, and high throughput methods for large scale structural and functional characterization of gene expression regulatory elements in a genome of an organism, especially in a human genome, that are part of a common pathway. In one aspect of the invention, an array of expression constructs is provided, each of the expression constructs comprising: a nucleic acid segment operably linked with a reporter sequence in an expression vector such that expression of the reporter sequence is under the transcriptional control of the nucleic acid segment. The present invention can have a wide variety of applications such as in personalized medicine, pharmacogenomics, and correlation of polymorphisms with phenotypic traits.
Abstract: This invention provides libraries of expression constructs having different untranslated regions (UTR) from a genome. The expression constructs include transcription regulatory sequences operably linked with a reporter gene and a 5? UTR, a 3? UTR or both, wherein the translation of the reporter gene is under the regulatory control of control regions in the UTR sequence. The libraries of this invention are useful for determining the impact of regulatory sequences in the UTRs on translation of open reading frames under a variety of conditions, such as different cellular environments.
Type:
Application
Filed:
March 5, 2008
Publication date:
September 11, 2008
Applicant:
SwitchGear Genomics a California Corporation