Patents Assigned to The Burnham Institute
  • Patent number: 8105798
    Abstract: This invention relates to methods for identifying agents useful for treatment of diseases and pathological conditions affected by Retinoid X Receptor apoptosis. The invention also relates to methods for treating diseases and pathological conditions affected by RXR apoptosis. The invention includes compositions that are useful in the study and treatment of diseases and pathological conditions affected by RXR apoptosis.
    Type: Grant
    Filed: August 13, 2004
    Date of Patent: January 31, 2012
    Assignee: The Burnham Institute
    Inventors: Xiao-kun Zhang, Xihua Cao, Wen Liu
  • Publication number: 20120015992
    Abstract: Methods of using apogossypol and its derivatives for treating inflammation is disclosed. Also, there is described a group of compounds having structure A, or a pharmaceutically acceptable salt, hydrate, N-oxide, or solvate thereof are provided: wherein each R is independently H, C(O)X, C(O)NHX, NH(CO)X, SO2NHX, or NHSO2X, wherein X is hydrogen, alkyl, substituted alkyl, aryl, substituted aryl, alkylaryl, substituted alkylaryl, heterocycle, or substituted heterocycle. Compounds of group A may be used for treating various diseases or disorders, such as cancer.
    Type: Application
    Filed: September 21, 2011
    Publication date: January 19, 2012
    Applicant: Burnham Institute for Medical Research
    Inventor: Maurizio Pellecchia
  • Patent number: 8039668
    Abstract: Methods of using apogossypol and its derivatives for treating inflammation is disclosed. Also, there is described a group of compounds having structure A, or a pharmaceutically acceptable salt, hydrate, N-oxide, or solvate thereof are provided: wherein each R is independently H, C(O)X, C(O)NHX, NH(CO)X, SO2NHX, or NHSO2X, wherein X is hydrogen, alkyl, substituted alkyl, aryl, substituted aryl, alkylaryl, substituted alkylaryl, heterocycle, or substituted heterocycle. Compounds of group A may be used for treating various diseases or disorders, such as cancer.
    Type: Grant
    Filed: April 14, 2010
    Date of Patent: October 18, 2011
    Assignee: Burnham Institute for Medical Research
    Inventor: Maurizio Pellecchia
  • Patent number: 8039255
    Abstract: The finding that Dickkopf1 (Dkk1) is a dual function protein demonstrates a mechanism for the coordination of cell migration and antagonism of Wnt/?-catenin signaling during developmental and pathological processes. The profile of Dkk proteins expressed by human breast cancers correlates with indicators of outcome: Dkk1 associates with markers of poor prognosis whereas expression of single function Dkk2 or Dkk3 (which inhibit Wnt/?-catenin signaling and promote migration, respectively) correlates with phenotypes reflective of good prognosis. Therefore, the pro-migratory activities of Dkk1 and 3 identified here offer new insights into breast cancer progression and a potential avenue for therapeutic intervention.
    Type: Grant
    Filed: November 1, 2010
    Date of Patent: October 18, 2011
    Assignee: The Burnham Institute
    Inventors: Mark Mercola, Ruchika Gupta
  • Patent number: 8037094
    Abstract: A hybrid annotation and publication system can access content in a scalable manner from databases, allowing for its editing and publication via wiki-style programs, while at the same time allowing for peer-review of such content via peer-review programs. This system balances the wiki-style programs, the peer-review programs, and any database store accesses in a manner appropriate to the need at hand according to various heuristics. For instance, the system can be accessed via a web browser, and data provided from various databases can be edited. Such data can be stored in the system in a hierarchical manner. Once the content is annotated, it can be reviewed (at various levels, ranging from expert to novice). Upon review, such content can be published using the wiki programs, so that the content is ready for public and/or private consumption.
    Type: Grant
    Filed: August 14, 2007
    Date of Patent: October 11, 2011
    Assignee: The Burnham Institute
    Inventors: Adam Godzik, Sri Krishna Subramanian, Dana Grace Weekes
  • Patent number: 8022246
    Abstract: Neurite outgrowth-promoting prostaglandins (NEPPs) and other electrophilic compounds bind to Keap1, a negative regulator of the transcription factor Nrf2, and prevent Keap1-mediated inactivation of Nrf2 and, thus, enhance Nrf2 translocation into the nucleus of neuronal cells. Therefore, neuroprotective compositions and related methods are provided that employ such neuroprotective compounds, and prodrugs of such compounds, to cause dissociation of Nrf2 from a Keap1/Nrf2 complex.
    Type: Grant
    Filed: October 10, 2007
    Date of Patent: September 20, 2011
    Assignee: The Burnham Institute for Medical Research
    Inventors: Stuart Lipton, Takumi Satoh
  • Patent number: 8008354
    Abstract: Methods of identifying death receptor sensitizing compounds and methods of using death receptor sensitizing compounds are provided.
    Type: Grant
    Filed: January 11, 2007
    Date of Patent: August 30, 2011
    Assignee: Burnham Institute for Medical Research
    Inventors: Aaron D Schimmer, John C. Reed
  • Publication number: 20110183358
    Abstract: The invention provides isolated agents having novel chemical structures and possessing superior activity as derepressors of IAP inhibited caspase. The invention further provides a method of derepressing an IAP-inhibited caspase. The invention further provides assay methods employing labeled compounds of the invention, especially fluorescent labeled compounds.
    Type: Application
    Filed: March 17, 2006
    Publication date: July 28, 2011
    Applicants: THE BURNHAM INSTITUTE, TORREY PINES INSTITUTE FOR MOLECULAR STUDIES
    Inventors: John C. Reed, Richard A. Houghten, Adel Nefzi, John M. Ostresh, Kate Welsh, Clemencia Pinilla
  • Patent number: 7982002
    Abstract: In accordance with the present invention, there are provided novel Siah-Mediated-Degradation-Proteins (SMDPS) and/or SCF-Complex Proteins (SCPs). Nucleic acid sequences encoding such proteins and assays employing same are also disclosed. The invention SMDPs and/or SCPs can be employed in a variety of ways, for example, for the production of anti-SMDP and/or SCP antibodies thereto, in therapeutic compositions, and methods employing such proteins and/or antibodies for drug screening, functional genomics and other applications. Also provided are transgenic non-human mammals that express the invention protein. Also provided are compositions and methods for targeting the destruction of selected polypeptides in eukaryotic cells based on the ubiquitin-independent mechanism by which ornithine decarboxylase is degraded by the 26S proteasome.
    Type: Grant
    Filed: March 4, 2009
    Date of Patent: July 19, 2011
    Assignee: Burnham Institute for Medical Research
    Inventors: John C. Reed, Shu-ichi Matsuzawa
  • Publication number: 20110165083
    Abstract: The present invention provides a conjugate containing a moiety linked to a homing molecule that selectively homes to tumor lymphatic vasculature. The invention also provides a method of directing a moiety to tumor lymphatic vasculature in a subject by administering to the subject a conjugate containing a moiety linked to a homing molecule that selectively homes to tumor lymphatic vasculature.
    Type: Application
    Filed: January 22, 2010
    Publication date: July 7, 2011
    Applicant: Burnham Institute for Medical Research
    Inventors: Pirjo Laakkonen, Kimmo Porkka, Jason A. Hoffman, Erkkil Ruoslahti
  • Publication number: 20110130342
    Abstract: The present invention relates to a peptide, which specifically homes to the intracranial, early stage astrocytoma model that grows as islets and harbors co-opted tumor vessels in the brain. The peptide finds its use in targeted delivery of therapeutic substances to invasive brain cancer or metastatic brain lesions as such and in combination with conventional therapies, such as surgery and radiation, and anti-angiogenic therapies, and as a tool in diagnosis of, e.g., invasive brain cancer or metastatic brain lesions.
    Type: Application
    Filed: May 8, 2009
    Publication date: June 2, 2011
    Applicant: BURNHAM INSTITUTE FOR MEDICAL RESEARCH
    Inventors: Pirjo Laakkonen, Erkki Ruoslahti, Gabriele Bergers
  • Patent number: 7951832
    Abstract: The present invention provides compounds having the general structure I, or a pharmaceutically acceptable salt thereof: wherein X is a six-member ring selected from phenyl, pyridine, or pyrimidine; Y is H, an alkenyl, a substituted alkenyl, or alkynyl, and R is H or alkyl. Pharmaceutical compositions for treating various disorders such as cancers, the compositions including compound I are also provided.
    Type: Grant
    Filed: October 30, 2008
    Date of Patent: May 31, 2011
    Assignee: Burnham Institute for Medical Research
    Inventors: Maurizio Pellecchia, Surya De, Elisa Barile
  • Patent number: 7947717
    Abstract: The invention provides compounds that can efficiently and specifically inhibit bacterial toxins, such as inhibit the lethal factor (LF) protease activity of anthrax toxin and/or botulinum neurotoxin type A. The invention also provides methods for inhibiting proteases, such as lethal factor protease, as well as methods for treating bacterial infections, such as anthrax and botulinum.
    Type: Grant
    Filed: July 18, 2008
    Date of Patent: May 24, 2011
    Assignee: Burnham Institute for Medical Research
    Inventor: Maurizio Pellecchia
  • Publication number: 20110091560
    Abstract: Disclosed herein are compositions of nanoparticles. In some embodiments, the nanoparticles are Janus particles, where each particle includes a first component and second component that are exposed to the surface of the particle. Also, disclosed are methods and systems for making a composition of nanoparticles. Finally, a method of treating a mammal by administering a composition of nanoparticles is disclosed.
    Type: Application
    Filed: October 20, 2010
    Publication date: April 21, 2011
    Applicant: The Burnham Institute for Medical Research
    Inventors: Jeff Smith, Hui Xie
  • Patent number: 7919581
    Abstract: The present invention provides compound having the general structure A or pharmaceutically acceptable salts thereof: Het-L-P??(A) wherein Het is an aromatic moiety comprising a heterocyclic structure mimicking ATP, P is a docking site derived peptide or a docking site peptide mimetic, and L is a linking moiety, wherein L links the ATP mimetic to the docking site peptide moiety. The compounds having the general structure A can serve as inhibitors of kinases, such as the kinases JNK, Erk and p38.
    Type: Grant
    Filed: July 31, 2008
    Date of Patent: April 5, 2011
    Assignee: Burnham Institute for Medical Research
    Inventor: Maurizio Pellechia
  • Patent number: 7910305
    Abstract: Compositions and methods are provided for screening for compounds that modulate insulin promoter activity. Vectors that express green fluorescent protein under the control of the human insulin promoter are introduced into mouse and human cells in which the insulin promoter is expressed in a glucose-responsive manner. Such cells are then used to screen for compounds that modulate insulin promoter activity.
    Type: Grant
    Filed: September 14, 2006
    Date of Patent: March 22, 2011
    Assignee: The Burnham Institute for Medical Research
    Inventors: Mark Mercola, Fred Levin, Pamela Itkin-Ansari
  • Patent number: 7888355
    Abstract: There are provided methods of inhibiting growth and metastasis of melanoma, methods of sensitizing melanoma cells to apoptosis, and methods of treating a subject having melanoma using acetyl isogambogic acid, celastrol, or a derivative thereof. There are further provided derivatives of celastrol and compositions comprising acetyl isogambogic acid, celastrol, or a derivative thereof.
    Type: Grant
    Filed: August 11, 2010
    Date of Patent: February 15, 2011
    Assignee: Burnham Institute for Medical Research
    Inventors: Ze′ev A. Ronai, Anindita Bhoumik, Nicholas D. P. Cosford, Russell Dahl
  • Publication number: 20110027260
    Abstract: The invention provides Bcl-G polypeptides and encoding nucleic acids. Bcl-G polypeptides include Bcl-GL and Bcl-GS. The invention also provides mouse Bcl-G. The invention also provides vectors containing Bcl-G nucleic acids, host cells containing such vectors, Bcl-G anti-sense nucleic acids and related compositions. The invention additionally provides Bcl-G oligonucleotides that can be used to hybridize to or amplify a Bcl-G nucleic acid. Anti-Bcl-G specific antibodies are also provided. Further provided are kits containing Bcl-G nucleic acids or Bcl-G specific antibodies. Such kits and reagents can be used to diagnose cancer, monitor response to therapy, or predict the prognosis of a cancer patient. The invention additionally provides methods of modulating apoptosis using Bcl-G polypeptides, encoding nucleic acids, or compounds that modulate the activity or expression of Bcl-G polypeptides. The methods for modulating apoptosis can be used to treat diseases such as cancer.
    Type: Application
    Filed: December 23, 2009
    Publication date: February 3, 2011
    Applicant: Burnham Institute for Medical Research
    Inventors: John C. Reed, Adam Godzik
  • Publication number: 20110028690
    Abstract: The present invention provides a family of BAG-1 related proteins from humans (BAG-1L, BAG-1, BAG-2, BAG-3, BAG-4 and BAG-5), the invertebrate C. elegans (BAG-1, BAG-2) and the fission yeast S. pombe (BAG-1A, BAG-1B) and the nucleic acid molecules that encode them.
    Type: Application
    Filed: April 20, 2010
    Publication date: February 3, 2011
    Applicant: Burnham Institute for Medical Research
    Inventors: John C. Reed, Shinichi Takayama
  • Patent number: 7871793
    Abstract: Compositions useful for inhibiting the growth of bacteria, including bacteria that can cause gastric ulcers, are provided. In addition, transgenic organism that can produce such compositions are provided. Methods of using the compositions to treat or prevent gastric ulcers in a subject, including a human subject, also are provided.
    Type: Grant
    Filed: February 18, 2005
    Date of Patent: January 18, 2011
    Assignee: Burnham Institute for Medical Research
    Inventors: Jun Nakayama, Masatomo Kawakubo, Minoru Fukuda, Tsutomu Katsuyama