Patents Assigned to University of Chicago
  • Publication number: 20210346495
    Abstract: The current disclosure describes the use of NFkB inhibitors as immune potentiators in vaccine compositions comprising adjuvants. Accordingly, aspects of the disclosure relate to a method for vaccinating a subject comprising administering a NFkB inhibitor and an adjuvant (or a composition of the disclosure comprising NFkB and an adjuvant) to the subject. Further aspects relate to a method for inhibiting an inflammatory reaction associated with an adjuvant in a subject, the method comprising co-administering a NFkB inhibitor and an adjuvant (or a composition of the disclosure comprising NFkB and an adjuvant) to the subject. Yet further aspects relate to a pharmaceutical composition comprising a NFkB inhibitor and an adjuvant.
    Type: Application
    Filed: June 3, 2021
    Publication date: November 11, 2021
    Applicant: THE UNIVERSITY OF CHICAGO
    Inventors: Aaron ESSER-KAHN, Brittany MOSER
  • Patent number: 11156553
    Abstract: An optical resonance imaging system includes a light emitting device to emit laser pulses onto a subject. The laser pulses include a first pulse and a second pulse to place the subject in an excited state. The laser pulses also include a third pulse to stimulate emission of one or more third order signals from the subject. The system also includes a spectrometer to receive the one or more third order signals and to generate spectrum signals commensurate with intensities of the one or more third order signals. The system may further include circuitry configured to analyze the spectrum signals, generate one or more images of the subject based on the analysis, and construct one or more maps of positions of the subject based on the one or more images.
    Type: Grant
    Filed: November 6, 2018
    Date of Patent: October 26, 2021
    Assignee: The University of Chicago
    Inventors: Gregory S. Engel, Marco Alberto Allodi
  • Publication number: 20210317506
    Abstract: Certain embodiments are directed to compositions and methods for capture of elements in physical proximity. In certain aspects the methods comprise (a) contacting a target with a functionalized scaffold or capture agent that comprises activatable cross-linking moieties to form a target/scaffold mixture; (b) exposing the target/scaffold mixture to an activator to activate the cross-linking moieties of the dendrimer and form a cross-linked target/scaffold complex; (c) isolating the target/scaffold complexes; and (d) identify portions of the target or targets that are cross linked with the scaffold.
    Type: Application
    Filed: May 8, 2019
    Publication date: October 14, 2021
    Applicant: The University of Chicago
    Inventors: Chuan HE, Qiancheng YOU
  • Publication number: 20210310062
    Abstract: The methods, compositions, and kits of the disclosure provide a novel approach for a whole genome, unbiased DNA analysis method that can be performed on limited amounts of DNA. can be used to analyze DNA to determine its modification status. Aspects of the disclosure relate to a method for amplifying bisulfite-treated deoxyribonucleic acid (DNA) molecules comprising: (a) ligating an adaptor to the DNA molecules, wherein the adaptor comprises a RNA polymerase promoter comprising bisulfite-protected cytosines; (b) treating the ligated DNA molecules with bisulfite; (c) hybridizing the bisulfite-treated DNA molecules with a primer; (d) extending the hybridized primer to make double stranded DNA; and (e) in vitro transcribing the double-stranded DNA to make RNA.
    Type: Application
    Filed: July 26, 2019
    Publication date: October 7, 2021
    Applicant: The University of Chicago
    Inventors: Chuan HE, Ji NIE, Xiao-Long CUI
  • Publication number: 20210312612
    Abstract: A method and apparatus uses multi-material decomposition of three or more material components to generate material-component images from spectral images reconstructed from spectral computed tomography data. In three-component material decomposition e.g., the Mendonça method is used for multi-material decomposition when the attenuation values satisfy an assumed volume fraction condition (i.e., for a given voxel, the attenuation values are within a triangle having vertices given by unit volume fractions of three respective material components). However, when the volume fraction condition fails (e.g., the attenuation values are outside the triangle), either a shortest-Hausdorff-distance method or a closest-edge method is used for multi-material decomposition. For example, the attenuation values of the voxel are projected onto a lower-dimensional space (e.g., the space of a closest edge) and decomposed into a pair/single material component(s) of the lower-dimensional space.
    Type: Application
    Filed: April 3, 2020
    Publication date: October 7, 2021
    Applicants: The University of Chicago, CANON MEDICAL SYSTEMS CORPORATION
    Inventors: Dimple MODGIL, Patrick La Riviere, Yan Liu, Zhou Yu
  • Patent number: 11139959
    Abstract: An embodiment involves receiving a request to write data to a memory unit. The memory unit is divided into one or more logical blocks, each subdivided into groups of sub-blocks encrypted in accordance with a stream cipher. The memory unit maintains a transaction journal that marks each sub-block as dirty or clean. The memory unit stores keycount values for each of the logical blocks. The embodiment also involves: determining that the request seeks to write a portion of the data to a particular sub-block marked as dirty in the transaction journal, decrypting the particular logical block in accordance with the stream cipher, writing the portion of the data to the particular sub-block, incrementing the keycount value of the particular logical block, encrypting the particular logical block using the stream cipher, a key, and the keycount value, and writing the particular logical block to the memory unit.
    Type: Grant
    Filed: February 1, 2019
    Date of Patent: October 5, 2021
    Assignee: The University of Chicago
    Inventors: Bernard Dickens, III, Haryadi Gunawi, Ariel Feldman, Henry Hoffmann
  • Patent number: 11136618
    Abstract: Described herein are nucleic acid molecules and complexes useful as i-switch pH reporters that have increased sensitivities as a pH reporter and have alternate pH reporting capacity ranges. Aspects of the disclosure relate to a method for determining pH comprising providing a nucleic acid complex comprising: a first single-stranded nucleic acid molecule comprising the sequence CnXCnYCnZCn (SEQ ID NO.
    Type: Grant
    Filed: May 18, 2016
    Date of Patent: October 5, 2021
    Assignees: The University of Chicago, The National Centre for Biological Sciences, Tata Institute of Fundamental Research
    Inventors: Yamuna Krishnan, Saheli Halder
  • Patent number: 11130991
    Abstract: Methods, compositions and kits are provided to amplify the amount of genomic methylated DNA can by subsequently analyzed and/or sequenced. It has particular use with small amounts of DNA, including, but not limited to cell free DNA samples. In some embodiments, the ratio of polymerase and methyltransferase is controlled in order to provide maximum yields. In some embodiments, a dual primase/polymerase is used.
    Type: Grant
    Filed: March 8, 2018
    Date of Patent: September 28, 2021
    Assignee: THE UNIVERSITY OF CHICAGO
    Inventors: Chuan He, Boxuan Simen Zhao, Pradnya Narkhede, Chang Liu, Xiaolong Cui
  • Patent number: 11118233
    Abstract: Provided herein are mutations in Bruton's Tyrosine Kinase (BTK) that confer resistance to treatment with a BTK inhibitors, such as Ibrutinib, and compositions and methods for the treatment, diagnosis, and characterization of BTK-inhibitor-resistant cancers.
    Type: Grant
    Filed: May 18, 2017
    Date of Patent: September 14, 2021
    Assignee: The University of Chicago
    Inventor: Y. Lynn Wang
  • Patent number: 11116977
    Abstract: One aspect of the present disclosure relates to a method for controlling levels of perceived intensity of a sensory stimulus. The method includes configuring a stimulation signal with an activation charge rate (ACR) based on a predefined level of intensity by a subject during an action. The ACR is based on a strength of pulses in the stimulation signal parameter and a frequency of pulses in the stimulation signal parameter. The stimulation signal can be applied to neural tissue of a subject during the action. Based on the stimulation signal, the subject can be induced to perceive the predefined level of intensity during the action.
    Type: Grant
    Filed: October 11, 2017
    Date of Patent: September 14, 2021
    Assignees: CASE WESTERN RESERVE UNIVERSITY, THE UNIVERSITY OF CHICAGO
    Inventors: Dustin James Tyler, Emily Lauren Graczyk, Sliman Julien Bensmaia, Benoit Pierre Delhaye, Hannes Philipp Saal
  • Patent number: 11097014
    Abstract: A nanoparticle delivery system designed for sustained delivery of microRNA-150 (miR-150) to FLT3-overexpressing acute myeloid leukemia (AML) cells, the delivery system comprising poly(amidoamine) (PAMAM) dendrimers complexed with miR-150, wherein at least one dendrimer is surface-functionalized with a ligand specific for FLT3 receptor, and methods for treating AML characterized by FLT3-overexpression are provided.
    Type: Grant
    Filed: June 14, 2017
    Date of Patent: August 24, 2021
    Assignees: University of Cincinnati, Board of Trustees of the University of Illinois, University of Chicago
    Inventors: Jianjun Chen, Seungpyo Hong, Xi Jiang, Zejuan Li
  • Publication number: 20210252040
    Abstract: Disclosed herein is the de novo synthesis of phosphorylated polyethylene glycol compounds with three defined ABA (hydrophilic/-phobic/-philic) structures: ABA-PEG10k-Pi10, ABA-PEG16k-Pi14, and ABA-PEG20k-Pi20 and linear polymer PEG20k-Pi20 absent of hydrophobic block. The disclosure also provides materials and methods for treating or reducing the risk or likelihood of developing, anastomotic leak or other microbe-mediated disorders by administering a therapeutically effective amount of a plasminogen inhibitor such as tranexamic acid and/or a phosphate-loaded polymer.
    Type: Application
    Filed: April 23, 2019
    Publication date: August 19, 2021
    Applicants: THE UNIVERSITY OF CHICAGO, RUSH UNIVERSITY MEDICAL CENTER
    Inventors: John C. ALVERDY, Olga Y. ZABORINA, Richard A. JACOBSON
  • Publication number: 20210244751
    Abstract: Described are methods for preventing or inhibiting genomic instability and in cells affected by diagnostic radiology procedures employing ionizing radiation. Embodiments include methods of preventing or inhibiting genomic instability and in cells affected by computed tomography (CT) radiation. Subjects receiving ionizing radiation may be those persons suspected of having cancer, or cancer patients having received or currently receiving cancer therapy, and or those patients having received previous ionizing radiation, including those who are approaching or have exceeded the recommended total radiation dose for a person.
    Type: Application
    Filed: April 26, 2021
    Publication date: August 12, 2021
    Applicant: The University of Chicago
    Inventor: David J. GRDINA
  • Publication number: 20210246137
    Abstract: Disclosed are compounds of formula (I) and formula (II): wherein R1, R2, A, and B are as defined herein. Also disclosed is a method of blocking transmission of a Plasmodium parasite and a method of treating or preventing malaria comprising administering to an animal an effective amount of a first compound of formula (I) or (II) either alone or in combination with a second compound selected from elesclomol, NSC174938, NVP-AUY922, Maduramicin, Narasin, Alvespimycin, Omacetaxine, Thiram, Zinc pyrithione, Phanquinone, Bortezomib, Salinomycin sodium, Monensin sodium, Dipyrithione, Dicyclopentamethylene-thiuram disulfide, YM155, Withaferin A, Adriamycin, Romidepsin, AZD-1152-HQPA, CAY10581, Plicamycin, CUDC-101, Auranofin, Trametinib, GSK-458, Afatinib, and Panobinostat.
    Type: Application
    Filed: April 22, 2021
    Publication date: August 12, 2021
    Applicants: The United States of America,as represented by the Secretary,Department of Health and Human Services, Loyola University of Chicago
    Inventors: Wenwei Huang, Hao Li, Wei Sun, Xiuli Huang, Paresma R. Patel, Hangmao Sun, Wei Zheng, Xiao Lu, Philip E. Sanderson, Myunghoon Kim, Meghan J. Orr, Gregory J. Tawa, Kim C. Williamson
  • Publication number: 20210244812
    Abstract: The present disclosure provides compositions comprising mannose-fused antigens to target mannose receptors. The compositions may be used to prevent immunity or reduce an immune response protein-based drugs that would otherwise elicit an immune response.
    Type: Application
    Filed: May 9, 2019
    Publication date: August 12, 2021
    Applicants: The University of Chicago, Anokion SA
    Inventors: Jeffrey A. HUBBELL, David Scott WILSON, Kym BRÜNGGEL, Kristen Marie LORENTZ
  • Patent number: 11085939
    Abstract: Disclosed herein is a method for quantifying phosphatidylethanol (“PEth”), a direct ethanol biomarker, from a blood sample using gas chromatography mass spectrometry. The method disclosed herein is useful for diagnosing acute and chronic alcohol abuse.
    Type: Grant
    Filed: March 22, 2019
    Date of Patent: August 10, 2021
    Assignee: LOYOLA UNIVERSITY OF CHICAGO
    Inventors: James Vincent DeFrancesco, Majid Afshar
  • Publication number: 20210228715
    Abstract: In some embodiments, the methods involve the use of a combination of at least two of the following: an inhibitor of indoleamine-2,3-dioxygenase (IDO), an inhibitor of the PD-L1/PD-1 pathway, an inhibitor of CTLA-4, an inhibitor of CD25, or IL-7. The inventors particularly observed a major synergistic effect of combining anti-CTLA-4 with either an IDO inhibitor, with anti-PD-L1 mAb, or with CD-25 depletion. Such combinations have been found to demonstrate a synergistic effect in treating cancer and tumors, for example by reducing tumor size, increasing the percentage of antigen-specific T cells, and increasing T cell function.
    Type: Application
    Filed: February 5, 2021
    Publication date: July 29, 2021
    Applicant: The University of Chicago
    Inventors: Thomas F. Gajewski, Stefani Spranger, Michael Leung
  • Publication number: 20210221895
    Abstract: Provided are specific binding molecules, or fragments thereof, that bind to an epitope of IL13R?2, a receptor polypeptide preferentially found on the surface of cancer cells rather than healthy cells. Exemplary specific binding molecules are bispecific binding molecules that comprise a fragment of an IL13R?2 binding molecule and a peptide providing a second function providing a signaling function of the signaling domain of a T cell signaling protein, a peptide modulator of T cell activation, or an enzymatic component of a labeling system. Also provided are polynucleotides encoding such a specific binding molecule (e.g., bispecific binding molecule), vectors, host cells, pharmaceutical compositions and methods of preventing, treating or ameliorating a symptom associated with a cancer disease such as a solid tumor disease (e.g., glioblastoma multiforme).
    Type: Application
    Filed: November 19, 2020
    Publication date: July 22, 2021
    Applicant: The University of Chicago
    Inventors: Irina V. BALYASNIKOVA, Maciej S. LESNIAK
  • Patent number: 11065096
    Abstract: Medical procedures and devices suitable for reducing the risk of embolic cerebrovascular events, including but not limited to cardioembolic stroke, that result from emboli entering the right or left common carotid artery. The invention uses a combination of intracranial flow diverting stent technologies and carotid stent technologies to achieve clinical objectives of embolic stroke prevention without thromboembolic and/or vascular stenosis complication. Such a stent has struts that generate high radial forces for endothelial apposition, and a mesh with interstices sufficiently small to prevent clinically significant-sized embolic material from passing therethrough from the common carotid artery into the internal carotid artery, but sufficiently large to enable blood and small clinically insignificant-sized embolic material to pass therethrough from the common carotid artery into the internal carotid artery.
    Type: Grant
    Filed: May 31, 2018
    Date of Patent: July 20, 2021
    Assignee: Loyola University Chicago
    Inventor: Daniel Heiferman
  • Publication number: 20210214773
    Abstract: Embodiments are directed to N3-kethoxal reagents and derivatives thereof, and related methods that allow fast and reversible labeling of single-stranded nucleic acids in live cells. By way of example, one aspect is directed to a process for reversible labeling of single-stranded guanine bases in live cells, which results in an effective in vivo method for transcriptome-wide RNA secondary structure mapping and RNA G-quadruplex prediction.
    Type: Application
    Filed: May 8, 2019
    Publication date: July 15, 2021
    Applicant: The University of Chicago
    Inventors: Chuan HE, Xiaocheng WENG, Tong WU