Patents Examined by Padmashri Ponnaluri
  • Patent number: 6696245
    Abstract: The invention provides a method for selecting, from a repertoire of polypeptides, a population of functional polypeptides which bind a target ligand in a first binding site and a generic ligand in a second binding site, which generic ligand is capable of binding functional members of the repertoire regardless of target ligand specificity, comprising the steps of: a) contacting the repertoire with the generic ligand and selecting functional polypeptides bound thereto; and b) contacting the selected functional polypeptides with the target ligand and selecting a population of polypeptides which bind to the target ligand. The invention accordingly provides a method by which a polypeptide repertoire is preselected, according to functionality as determined by the ability to bind the generic ligand, and the subset of polypeptides obtained as a result of such preselection is then employed for further selection according to the ability to bind the target ligand.
    Type: Grant
    Filed: November 17, 1998
    Date of Patent: February 24, 2004
    Assignee: Domantis Limited
    Inventors: Greg Winter, Ian Tomlinson
  • Patent number: 6692699
    Abstract: A rubbed substrate structure for use in a liquid crystal assay device, includes: a biochemical blocking compound chemically immobilized on a surface of one side of a support forming a biochemical blocking layer; and a biomolecule recognition agent deposited on the side of the support containing the biochemical blocking layer. The biomolecule recognition agent includes a recognition site capable of selectively recognizing a target species to be detected by the liquid crystal assay device. Additionally, the surface of the side of the support containing the biochemical blocking layer is rubbed such that it possesses features that drive a uniform anchoring of liquid crystals when the liquid crystals contact the side of the support containing the biochemical blocking layer.
    Type: Grant
    Filed: February 15, 2001
    Date of Patent: February 17, 2004
    Assignee: Wisconsin Alumni Research Foundation
    Inventors: Nicholas L. Abbott, Seung-Ryeol Kim
  • Patent number: 6682888
    Abstract: The present invention relates to a composition comprising a plurality of cDNAs which are differentially expressed in disorders of the brain, particularly Alzheimer's disease and which may be used in their entirety or in part as to diagnose, to stage to treat or to monitor the treatment of a subject with a brain disorder.
    Type: Grant
    Filed: May 5, 2000
    Date of Patent: January 27, 2004
    Assignee: Incyte Corporation
    Inventors: Jeanne F. Loring, Debora W. Tingley, Carla M. Edwards
  • Patent number: 6673347
    Abstract: Protein and polypeptide derivatives and their salts are claimed characterized in that a protein or polypeptide is conjugated via an intermediate grouping containing at least one radical of the formula —C(R)═N— (or —N═C(R)—) or —CH(R)—NH— (or —NH—CH(R)—), wherein R is hydrogen or a hydrocarbon residue which may be substituted, with the same or a different protein or polypeptide, with a reporter group or a cytotoxic agent as well as a process for their preparation and the novel intermediates therefor.
    Type: Grant
    Filed: May 12, 1994
    Date of Patent: January 6, 2004
    Assignee: Gryphon Therapeutics
    Inventors: Robin Ewart Offord, Keith Rose
  • Patent number: 6673596
    Abstract: Disclosed are bioluminescent bioreporter integrated circuit devices that detect selected analytes in fluids when implanted in the body of an animal. The device comprises a bioreporter that has been genetically engineered to contain a nucleic acid segment that comprises a cis-activating response element that is responsive to the selected substance operably linked to a gene encoding a bioluminescent reporter polypeptide. In preferred embodiments, the target analyte is glucose, glucagons, or insulin. Exposure of the bioreporter to the target substance causes the response element to up-regulate the nucleic acid sequence encoding the reporter polypeptide to produce a luminescent response that is detected and quantitated. In illustrative embodiments, the bioreporter device is encapsulated on an integrated circuit that is capable of detecting the emitted light, processing the resultant signal, and then remotely reporting the results.
    Type: Grant
    Filed: December 2, 1999
    Date of Patent: January 6, 2004
    Assignees: UT-Battelle, LLC, University of Tennessee Research Corporation
    Inventors: Gary S. Sayler, Michael L. Simpson, Bruce M. Applegate, Steven A. Ripp
  • Patent number: 6653153
    Abstract: A combinatorial library comprises a plurality of ligand-bearing support units, where the ligand-bearing support units comprise (a) a solid carrier, (b) one or more ligands covalently bound to the solid carrier, and (c) one or more encoding metal salts impregnated on the support unit, where the distribution of the cations of the encoding metal salts provides a code for identifying the ligand or ligands that are attached to the support units, and the cations have been stabilized against dissolution by treatment with one or more anions that form insoluble or poorly soluble salts of the cations.
    Type: Grant
    Filed: July 3, 2001
    Date of Patent: November 25, 2003
    Assignee: Merck & Co., Inc.
    Inventors: Yusheng Xiong, Kevin Chapman, Tiebang Wang
  • Patent number: 6649403
    Abstract: A system for the rapid characterization of multi-analyte fluids, in one embodiment, includes a light source, a sensor array, and a detector. The sensor array is formed from a supporting member into which a plurality of cavities may be formed. A series of chemically sensitive particles are, in one embodiment positioned within the cavities. The particles may be configured to produce a signal when a receptor coupled to the particle interacts with the analyte. Using pattern recognition techniques, the analytes within a multi-analyte fluid may be characterized.
    Type: Grant
    Filed: January 31, 2001
    Date of Patent: November 18, 2003
    Assignee: Board of Regents, The University of Texas Systems
    Inventors: John T. McDevitt, Eric V. Anslyn, Jason B. Shear, Dean P. Neikirk
  • Patent number: 6649358
    Abstract: Methods of monitoring transporter activity, gradient induced activity, and binding activity in microscale systems, as well as corresponding microscale devices, systems and kits are provided.
    Type: Grant
    Filed: May 25, 2000
    Date of Patent: November 18, 2003
    Assignee: Caliper Technologies Corp.
    Inventors: J. Wallace Parce, C. Nicholas Hodge, H. Garrett Wada
  • Patent number: 6642275
    Abstract: A dosage form for intranasal and/or inhalation administration of an analgesic having low opioid receptor binding activity to a warm blooded animal, that includes a pharmaceutically effective amount of the analgesic. A preferred analgesic is tramadol, a tramadol and/or a pharmaceutically acceptable salt, metabolite or derivative thereof. Methods of making and using the formulation according to the invention are also provided.
    Type: Grant
    Filed: August 16, 2001
    Date of Patent: November 4, 2003
    Assignee: Euro- Celtique, S.A.
    Inventors: Mark Alfonso, Paul Goldenheim, Richard Sackler
  • Patent number: 6642062
    Abstract: Particulate labels that can be individually identified comprise particulate supports to which are bound at least two distinguishable signal generating moieties, such as fluorophores emitting at different wavelengths, which signals are detectable and measurable in situ. By varying the ratio and/or amounts of the signal generating moieties, a multiplicity of different and distinguishable labels is obtained. Each different label can then be coupled to a different reagent and the individual interactions of each reagent with a target observed in parallel.
    Type: Grant
    Filed: September 3, 1998
    Date of Patent: November 4, 2003
    Assignee: Trellis Bioinformatics, Inc.
    Inventors: Lawrence M. Kauvar, John Sedat
  • Patent number: 6638509
    Abstract: The present invention relates to a toxin conjugate in which a residue derived from a compound having an affinity for a target cell is bound to a toxin through a spacer comprising polyalkylene glycol and dipeptide.
    Type: Grant
    Filed: February 8, 2000
    Date of Patent: October 28, 2003
    Assignee: Kyowa Hakko Kogyo, Co., Ltd.
    Inventors: Toshiyuki Suzawa, Motoo Yamasaki, Satoru Nagamura, Hiromitsu Saito, So Ohta, Nobuo Hanai
  • Patent number: 6632435
    Abstract: We have screened the HCMV-specific T cell clone, 33F4, with a nonamer PS-SCL based on SEQ ID NO: 1, and described a series of analog peptides that are recognized with greater affinity than the native peptide sequence.
    Type: Grant
    Filed: October 20, 2000
    Date of Patent: October 14, 2003
    Assignee: City of Hope
    Inventor: Don J. Diamond
  • Patent number: 6632655
    Abstract: Arrays of flowable or fixed particle sets are used in microfluidic systems for performing assays and modifying hydrodynamic flow. Also provided are assays utilizing flowable or fixed particle sets within a microfluidic system, as well as kits, apparatus and integrated systems comprising arrays and array members.
    Type: Grant
    Filed: February 22, 2000
    Date of Patent: October 14, 2003
    Assignee: Caliper Technologies Corp.
    Inventors: Tammy Burd Mehta, Anne R. Kopf-Sill, J. Wallace Parce, Andrea W. Chow, Luc J. Bousse, Michael R. Knapp, Theo T. Nikiforov, Steve Gallagher
  • Patent number: 6630353
    Abstract: The present invention provides novel microfluidic devices and methods that are useful for performing high-throughput screening assays. In particular, the devices and methods of the invention are useful in screening large numbers of different compounds for their effects on a variety of chemical, and preferably, biochemical systems.
    Type: Grant
    Filed: November 21, 2000
    Date of Patent: October 7, 2003
    Assignee: Caliper Technologies Corp.
    Inventors: J. Wallace Parce, Anne R. Kopf-Sill, Luc J. Bousse
  • Patent number: 6627406
    Abstract: Devices and methods are provided using microfluidic devices for manipulating small volumes and determining a variety of chemical and physical events. The devices rely upon an opening to the atmosphere of a small volume in a zone, where a sample is placed in the zone where evaporation can occur. The zone is maintained in contact with a liquid medium that serves to replenish the liquid in the zone and maintain the composition of the mixture in the zone substantially constant. The diffusion of components in the zone is restricted during the course of the determination by the liquid flux into the zone.
    Type: Grant
    Filed: May 10, 2000
    Date of Patent: September 30, 2003
    Assignee: Aclara BioSciences, Inc.
    Inventors: Sharat Singh, Vivian Xiao, Ian Gibbons, Travis Boone, Torleif Ove Bjornson, Herbert H. Hooper, Edwin F. Ullman
  • Patent number: 6623922
    Abstract: The invention provides methods for efficient and rapid identification of cis-acting nucleic acid sequences that act in a cell-type specific manner to stimulate or repress the expression of linked genes or other neighboring sequences. The invention also provides methods for evolving novel regulatory sequences by in vitro manipulation of naturally occurring or synthetic cis acting nucleic acid sequences followed by screening and counterscreening steps. Furthermore, the invention provides methods for determining the mechanism by which cell-type specific cis regulatory sequences confer cell-type specific expression. Also provided are diagnostic methods based on the use of cell-type specific cis regulatory sequences.
    Type: Grant
    Filed: February 14, 1997
    Date of Patent: September 23, 2003
    Assignee: Deltagen Proteomics
    Inventors: Carl Alexander Kamb, Giordano M. Caponigro
  • Patent number: 6607881
    Abstract: A method for selecting nucleic acid sequences encoding ligand and receptor molecules capable of specific binding to each other is disclosed in which nucleic acid encoding ligand or receptor molecules is expressed in a host microorganism in combination with a surface molecule, such as E. coli pili, so that the ligand or receptor are displayed on the surface of the host microorganism. A replicable genetic unit, such as a filamentous bacteriophage, is used to display candidate binding partners to the ligand or receptor, with the binding of the ligand or receptor to the candidate binding partner mediating the transfer of nucleic acid from the replicable genetic unit to the microorganism. The method can be highly selective as the host microorganism is modified so that it does not display the surface molecule other than as a fusion with the ligand or receptor molecule. The method is rapid and simple and opens up new applications based on the detection of ligand and receptors where both are unknown.
    Type: Grant
    Filed: June 30, 1998
    Date of Patent: August 19, 2003
    Assignee: Bioinvent International, AB
    Inventors: Carl Borrebaeck, Anki Malmborg, Eskil Söderlind
  • Patent number: 6605619
    Abstract: The instant invention is directed to the use of a biologically compatible composition, containing an effective amount of a metal-independent nitroxide compound which is preferably represented by the formula wherein R1 is —CH3; R2 is —C2H5, —C3H7, —C4H9, —C5H11, —C6H13, —CH2—CH(CH3)2, —CHCH3C2H5, or —(CH2)7—CH3, or wherein R1 and R2 together form spirocyclopentane, spirocyclohexane, spirocycloheptane, spirocyclooctane, 5-cholestane, or norbornane, R3 is —O. or —OH, or a physiologically acceptable salt thereof, and a pharmaceutically acceptable carrier, as antioxidants capable of protecting cells, tissues, organs, and whole organisms against the deleterious effects of harmful free radical species generated during oxidative stress.
    Type: Grant
    Filed: June 7, 1995
    Date of Patent: August 12, 2003
    Assignee: The United States of America as represented by the Secretary of the Department of Health and Human Services
    Inventors: James B. Mitchell, Amran Samuni, William G. Degraff, Stephen Hahn
  • Patent number: 6605702
    Abstract: A chemoattractant protein called “eotaxin” is capable of attracting eosinophils and of inducing eosinophil accumulation and/or activation in vitro and in vivo. Various types of agents that inhibit or otherwise hinder the production, release or activity of eotaxin may be used therapeutically in the treatment of asthma and other inflammatory diseases.
    Type: Grant
    Filed: November 18, 1998
    Date of Patent: August 12, 2003
    Assignee: Imperial College of Science Technology & Medicine
    Inventors: Timothy J. Williams, Peter J. Jose, David A. Griffiths-Johnson, John J. Hsuan
  • Patent number: 6605430
    Abstract: This invention provides improved monoxygenases, dehydrogenases, and transferases that are useful for the biocatalytic synthesis of compounds such as &agr;-hydroxycarboxylic acids, and aryl- and alkyl-hydroxy compounds. The polypeptides provided herein are improved in properties such as regioselectivity, enzymatic activity, stereospecificity, and the like. Methods for obtaining recombinant polynucleotides that encode these improved polypeptides are also provided, as are organisms that express the polypeptides and are thus useful for carrying out said biocatalytic syntheses. Also provided by the invention are methods for increasing said solvent resistance of organisms that are used in the synthetic methods.
    Type: Grant
    Filed: August 12, 1999
    Date of Patent: August 12, 2003
    Assignee: Maxygen, Inc.
    Inventors: Joseph A. Affholter, S. Christopher Davis, Sergey A. Selifonov