Patents Examined by Reza Ghafoorian
  • Patent number: 9164090
    Abstract: The present invention relates to methods for dynamically detecting the interactions between various materials including bioactive molecules and for detecting target molecules. More specifically, the present invention relates to a method for dynamically detecting bait-prey interactions and a method for easily detecting target molecules which blocks or activates the interactions, the method comprising: allowing a material capable of forming a nano-assembly matrix, a bait and a prey to interact with each other, and analyzing whether a nano-assembly matrix is formed by the interaction between the bait and the prey in vitro or in vivo; or allowing a material capable of forming a nano-assembly matrix, a bait and a prey to interact with each other, inducing the formation of a nano-assembly matrix by a mediator (regulator) material in vitro or in vivo, and then analyzing whether the prey and the bait co-localizes on the nano-assembly matrix.
    Type: Grant
    Filed: August 14, 2008
    Date of Patent: October 20, 2015
    Assignees: Korea Advanced Institute of Science and Technology, Korea Research Institute of Bioscience and Biotechnology
    Inventors: Tae Kook Kim, Seung Goo Lee, Sang Kyu Lee, Kyoung Hu Lee, Jae-Seok Ha
  • Patent number: 9127078
    Abstract: Methods and compositions for diagnosis and prognosis of mammalian carcinoma or cancer derived from primary epithelial cells and tissue fibrosis are designed using newly identified epithelial cell-type specific splicing factors ESRP1 and ESRP2, which have roles in tumor suppression. Diagnostic reagents for the detection of these splicing factors in nucleotide or protein form are useful in such methods. Therapeutic compositions can provide epithelial cells with these factors to maintain FGFR2 and assist in suppressing metastasis. A high throughput splicing assay to identify compounds that change splicing events is described. RNCP1 is also identified as a splicing factor and a diagnostic for conditions characterized by inappropriate FGFR2-splicing.
    Type: Grant
    Filed: July 21, 2009
    Date of Patent: September 8, 2015
    Assignee: The Trustees of the University of Pennsylvania
    Inventors: Russ P. Carstens, Claude Warzecha, John Hogenesch, Trey Sato
  • Patent number: 9114173
    Abstract: A method of using vaults as carrier molecules to deliver one or more than one substance to an organism, or to a specific tissue or to specific cells, or to an environmental medium. A vault-like particle. A method of preventing damage by one or more than one substance to an organism, to a specific tissue, to specific cells, or to an environmental medium, by sequestering the one or more than one substance within a vault-like particle. A method of delivering one or more than one substance or a sensor to an organism, to a specific tissue, to specific cells, or to an environmental medium. According to another embodiment of the present invention, there is provided a method of making vault-like particles, and making vault-like particles comprising one or more than one substance, or one or more than one sensor.
    Type: Grant
    Filed: December 10, 2014
    Date of Patent: August 25, 2015
    Assignee: The Regents of the University of California
    Inventors: Leonard H. Rome, Valerie A. Kickhoefer, Sujna Raval-Fernandes, Phoebe Stewart
  • Patent number: 9084745
    Abstract: The present invention relates to methods for modulating the activity of one or more Vps10p-domain receptors selected from the group consisting of Sortilin, SorLA, SorCS1, SorCS2 and SorCS3, in an animal and methods for preparation of a medicament for the treatment of abnormal plasma lipid concentrations and associated diseases and/or disorders. The modulation is carried out by inhibiting or promoting the binding of ligands to the Vps10p-domain receptor. In vitro and in vivo methods for screening for agents capable of modulation of said Vps10p-domain receptor activity are also provided. The invention furthermore relates to methods of altering expression of said receptors in vivo.
    Type: Grant
    Filed: May 20, 2009
    Date of Patent: July 21, 2015
    Assignee: H. Lundback A/S
    Inventors: Anders Nykjaer, Mads Fuglsang Kjolby
  • Patent number: 9078627
    Abstract: An introducer comprise a sheath for introducing a catheter into a blood vessel, a plurality of electrodes on the sheath, and an impedance assessment unit provided on the sheath and connected to the electrodes. The impedance assessment unit fixes one of a current or voltage across a first pair of the electrodes and measures the other of the current or voltage across a second pair of electrodes.
    Type: Grant
    Filed: May 10, 2012
    Date of Patent: July 14, 2015
    Assignee: TEXAS HEART INSTITUTE
    Inventors: Mehdi Razavi, Christopher Alexander Arevalos, Maurice Alan Brewer
  • Patent number: 9052321
    Abstract: Provided herein is a mammalian cell transformed to contain a plasmid encoding a T7 or SP6 promoter operably linked to one or more HCV genes, a subgenomic replicon from a flavivirus and a cytoplasmic T7 and SP6 RNA amplification system. Also provided herein are isolated replication-competent HCV particles produced by the method comprising the steps of providing a transformed mammalian cell according to the first embodiment, culturing the cell, and recovering the replication-competent HCV particles from the cell culture. Provided herein are isolated HCV structural proteins produced by the method comprising the steps of providing a transformed mammalian cell according to the first embodiment, culturing the cell, and recovering the HCV structural proteins from the cell culture.
    Type: Grant
    Filed: September 28, 2009
    Date of Patent: June 9, 2015
    Assignees: The United States of America, as represented by the Secretary, Department of Health and Human Services, INSERM (Institut National de la Sante et de la Recherche Medicale)
    Inventors: Bertrand Saunier, Miriam Triyatni, Edward A. Berger
  • Patent number: 9023621
    Abstract: The invention relates to novel polypeptides and cells comprising the polypeptides. The polypeptides and cells are used in methods to identify and/or isolate cells producing a protein with specific biological functions. In particular, the methods may be used for identifying, selecting, and isolating cells producing antigen-specific monoclonal antibodies.
    Type: Grant
    Filed: September 6, 2013
    Date of Patent: May 5, 2015
    Assignee: OncoMed Pharmaceuticals, Inc.
    Inventors: Austin L. Gurney, Alexandra L. L. Lazetic, Christopher J. Bond
  • Patent number: 9023618
    Abstract: The present invention relates to a recombinant E. coli exhibiting a complex phenotype, comprising one or more RNA polymerase subunit genes, one or more functional genes, and, optionally, one or more transcription factors from a heterologous prokaryote. Also provided are methods for screening such a recombinant E. coli.
    Type: Grant
    Filed: June 2, 2011
    Date of Patent: May 5, 2015
    Assignee: Eleftherios Papoutsakis and Stefan Gaida
    Inventors: Eleftherios T. Papoutsakis, Stefan Marcus Gaida
  • Patent number: 9018364
    Abstract: Nucleic acids, compositions, and methods that allow for the excision of one or more loci from the genome of a host cell are provided herein. In particular, provided herein is an excisable nucleic acid construct comprising, in a 5? to 3? orientation: a first tandem repeat nucleic acid, a first homing endonuclease recognition site, a target nucleic acid, a second homing endonuclease recognition site, and a second tandem repeat nucleic acid. In some embodiments, the excisable nucleic acid construct is integrated into the host cell genome, and the target nucleic acid can be excised from the host cell genome by contacting the homing endonuclease recognition sites with one or more appropriate homing endonucleases.
    Type: Grant
    Filed: August 29, 2011
    Date of Patent: April 28, 2015
    Assignee: Amyris, Inc.
    Inventor: Kirsten Benjamin
  • Patent number: 9006412
    Abstract: An expression vector capable of expressing a foreign gene in Pseudonocardia autotrophica; a transformant of Pseudonocardia autotrophica produced by using the expression vector; a method for producing a protein by using the transformant; a method for producing an active form of vitamin D3 from vitamin D3, which comprises highly expressing a gene encoding an enzyme involved in the synthesis of the active form of vitamin D3 in a transformant by using the expression vector or the transformant; a method for producing 25-hydroxyvitamin D2 from vitamin D2; and a method for producing pravastatin from compactin, which comprises highly expressing a compactin hydroxylase gene in a transformant by using the expression vector or the transformant.
    Type: Grant
    Filed: October 5, 2009
    Date of Patent: April 14, 2015
    Assignees: Microbiopharm Japan Co., Ltd., National Institute of Advanced Industrial Science and Technology
    Inventors: Yoshikazu Fujii, Tadashi Fujii, Akira Arisawa, Tomohiro Tamura
  • Patent number: 9006405
    Abstract: This invention provides modified nucleotide sequences encoding luciferase that have greater expression than wild type luciferase.
    Type: Grant
    Filed: May 27, 2011
    Date of Patent: April 14, 2015
    Assignee: SwitchGear Genomics, Inc.
    Inventors: Nathan D. Trinklein, Shelley Force Aldred
  • Patent number: 8962244
    Abstract: The invention relates to compositions and methods for inhibiting RNA binding proteins (e.g., MEX-3, MEX-5 and POS-1), as well as methods for treating and preventing disorders associated with parasitic infections and inflammatory disorders.
    Type: Grant
    Filed: January 8, 2013
    Date of Patent: February 24, 2015
    Assignee: University of Massachusetts
    Inventor: Sean Ryder
  • Patent number: 8945878
    Abstract: The invention relates to novel polypeptides and cells comprising the polypeptides. The polypeptides and cells are used in methods to identify and/or isolate cells producing a protein with specific biological functions. In particular, the methods may be used for identifying, selecting, and isolating cells producing antigen-specific monoclonal antibodies.
    Type: Grant
    Filed: September 6, 2013
    Date of Patent: February 3, 2015
    Assignee: OncoMed Pharmaceuticals, Inc.
    Inventors: Austin L. Gurney, Alexandra L. L. Lazetic, Christopher J. Bond
  • Patent number: 8933203
    Abstract: A method of using vaults as carrier molecules to deliver one or more than one substance to an organism, or to a specific tissue or to specific cells, or to an environmental medium. A vault-like particle. A method of preventing damage by one or more than one substance to an organism, to a specific tissue, to specific cells, or to an environmental medium, by sequestering the one or more than one substance within a vault-like particle. A method of delivering one or more than one substance or a sensor to an organism, to a specific tissue, to specific cells, or to an environmental medium. According to another embodiment of the present invention, there is provided a method of making vault-like particles, and making vault-like particles comprising one or more than one substance, or one or more than one sensor.
    Type: Grant
    Filed: October 15, 2008
    Date of Patent: January 13, 2015
    Assignee: The Regents of the University of California
    Inventors: Leonard H. Rome, Valerie A. Kickhoefer, Raval-Fernandes Sujna, Phoebe L. Stewart
  • Patent number: 8921070
    Abstract: The invention relates to the diagnosis of bladder cancer and more specifically to the detection in urine samples of bladder carcinomas of the transitional type. The detection method according to the present invention enables, through the utilization of a DNA chip designed for this purpose, to determine the grade of the detected tumors.
    Type: Grant
    Filed: May 13, 2011
    Date of Patent: December 30, 2014
    Assignee: Array Genomics
    Inventors: Olivier Cussenot, Ian Jones, Neil Metters, François Lozach
  • Patent number: 8889413
    Abstract: An isolated mammalian internal mammary artery-derived cell is disclosed. Furthermore, methods of isolating the mammalian internal mammary artery-derived cell are disclosed. The cell is useful in tissue engineering technologies, specifically in vascular tissue engineering.
    Type: Grant
    Filed: March 11, 2013
    Date of Patent: November 18, 2014
    Assignee: DePuy Synthes Products, LLC
    Inventors: David C. Colter, Charito Buensuceso, Christian C. Kazanecki, Anna Gosiewska
  • Patent number: 8846341
    Abstract: The present invention relates to the discovery that of a panel of serum or plasma markers may be used to diagnose Idiopathic Pulmonary Fibrosis (“IPF”) and distinguish this condition from other lung ailments. It further relates to the identification of markers associated with IPF disease progression.
    Type: Grant
    Filed: March 3, 2011
    Date of Patent: September 30, 2014
    Assignees: University of Pittsburgh—of the Commonwealth System of Higher Education, The University of Chicago, Instituto Nacional de Enfermedades Respiratorias Ismael Cosio Villegas—D.F.
    Inventors: Naftali Kaminski, Kevin F. Gibson, Bernadette R. Gochuico, Thomas J. Richards, Ivan Rosas, Kazuhisa Konishi, Moises Selman, Jose David Herazo-Maya, Imre Noth
  • Patent number: 8834367
    Abstract: A blood glucose and lifestyle tracking apparatus is disclosed. The blood glucose and lifestyle tracking apparatus provides a method for recording both blood glucose values for fasting, postprandial, and preprandial time periods and lifestyle factors.
    Type: Grant
    Filed: October 23, 2012
    Date of Patent: September 16, 2014
    Assignee: Roche Diagnostics Operations, Inc.
    Inventors: Remmert Laan, Stefan Weinert, Robin Wagner
  • Patent number: 8785181
    Abstract: Cell expansion systems and methods of use are provided. The cell expansion systems generally include a hollow fiber cell growth chamber, and first and second circulation loops (intracapillary loops and extracapillary loops) associated with the interior of the hollow fibers and exterior of the hollow fibers, respectively. Detachable flow circuits and methods of expanding cells are also provided.
    Type: Grant
    Filed: October 16, 2012
    Date of Patent: July 22, 2014
    Assignee: Terumo BCT, Inc.
    Inventor: Glen Delbert Antwiler
  • Patent number: 8771965
    Abstract: The present invention concerns the methods and compositions involving nucleic acids with long repeat sequences. In some embodiments of the invention, there are methods for generating such a nucleic acid, and in other methods, there are methods for using such a nucleic acid to screen for candidate therapeutic compounds. Furthermore the present invention relates to methods of screening for Notch inhibitors and other substances that may be used to treat muscle loss and wasting.
    Type: Grant
    Filed: March 14, 2012
    Date of Patent: July 8, 2014
    Assignee: The Board of Regents of the University of Texas System
    Inventors: Partha Sarkar, Tetsuo Ashizawa, Weidong Xu