Patents Examined by Sarae Bausch
  • Patent number: 7588893
    Abstract: The present invention discloses methods and kits for the determination of the concentration of one or more analytes in a liquid sample using capture agents immobilised on a solid support and binding agents for binding the analyte(s), the binding agents having tail groups capable of binding to the respective capture agent. Preferably, the capture agents and binding agents are complementary oligonucleotides, and the capture agents are immobilised in the form of microspots. The use of the tail groups and capture agents can allow the binding of the analyte(s) to the binding agent(s) to take place in solution, rather than at a surface, improving the kinetics associated with this process. In addition, the user of the assay can customise any suitable binding agents for use with a universal support, by attaching tail groups them.
    Type: Grant
    Filed: January 25, 2006
    Date of Patent: September 15, 2009
    Assignee: Multilyte Limited
    Inventor: Roger Philip Ekins
  • Patent number: 7553947
    Abstract: A method of identifying at least a nucleic acid molecule fragment to which a protein of interest binds, comprising: (i) preparing at least one nucleic acid molecule fragment to which a protein binds; (ii) isolating the 5? terminus and the 3? terminus of the nucleic acid fragment(s) and linking the 5? terminus and 3? terminus to create the at least one ditag; (iii) sequencing the ditag; and (iv) mapping the ditag sequence(s) to the genome.
    Type: Grant
    Filed: December 13, 2006
    Date of Patent: June 30, 2009
    Assignee: Agency for Science, Technology and Research
    Inventors: Patrick Ng, Chialin Wei, Yijun Ruan
  • Patent number: 7494772
    Abstract: Nucleotide sequences specific to Yersinia pestis that serve as markers or signatures for identification of this bacterium were identified. In addition, forward and reverse primers and hybridization probes derived from these nucleotide sequences that are used in nucleotide detection methods to detect the presence of the bacterium are disclosed.
    Type: Grant
    Filed: July 29, 2003
    Date of Patent: February 24, 2009
    Assignee: Lawrence Livermore National Security, LLC
    Inventors: Paula M. McCready, Lyndsay Radnedge, Gary L. Andersen, Linda L. Ott, Thomas R. Slezak, Thomas A. Kuczmarski, Vladinir L. Motin
  • Patent number: 7488813
    Abstract: Novel splice variants as diagnostic markers, preferably membrane-bound. The novel variants according to the present invention may optionally be used for diagnosis of Marker-detectable disease as described herein, optionally through immunohistochemistry.
    Type: Grant
    Filed: February 24, 2006
    Date of Patent: February 10, 2009
    Assignee: Compugen, Ltd.
    Inventors: Sarah Pollock, Anat Cohen-Dayag, Osnat Sella-Tavor, Shirley Sameah-Greenwald, Shira Walach, Lily Bazak
  • Patent number: 7485711
    Abstract: Isolated CYP19A1 nucleic acid molecules that include a nucleotide sequence variant and nucleotides flanking the sequence variant are described, as well as CYP19A1 allozymes. Methods for determining the aromatase status of an individual also are provided, as are methods for determining if a subject is predisposed to certain clinical conditions.
    Type: Grant
    Filed: August 16, 2005
    Date of Patent: February 3, 2009
    Assignee: Mayo Foundation for Medical Education and Research
    Inventors: Richard M. Weinshilboum, Eric O. Wieben, Oreste Salavaggione, Araba A. Adjei, Linda Pelleymounter, Josefa Coronel, Liewei Wang, Bruce Eckloff, Daniel Schaid, Cynthia X. Ma
  • Patent number: 7468244
    Abstract: Methods and compositions for polymorphism detection and separation. The methods are readily multiplexed, can be adapted to a variety of existing detection systems, and permit target amplification without PCR. The methods permit allelic variants selectively to be isolated, with or without contemporaneous detection, and finds particular utility in facilitating the construction of coisogenic cell collections in which the cells differ genotypically by single nucleotide changes targeted to defined loci.
    Type: Grant
    Filed: September 27, 2002
    Date of Patent: December 23, 2008
    Assignee: University of Delaware
    Inventors: Eric B. Kmiec, Michael C. Rice
  • Patent number: 7435543
    Abstract: The present invention provides a method of screening pigs to identify those which have a genetic predisposition to have a thinner or thicker backfat thickness by assaying the pattern of the five single nucleotide polymorphisms in the HSP70.2 gene that is associated with backfat thickness.
    Type: Grant
    Filed: October 5, 2004
    Date of Patent: October 14, 2008
    Assignee: Animal Technology Institute of Taiwan
    Inventors: En-Chung Lin, Ming-Yu Chen, San-Yuan Huang, Hui-Liang Tsou, Wen-Chuan Lee
  • Patent number: 7429456
    Abstract: The present invention concerns the V617F variant of the protein-tyrosine kinase JAK2, said variant being responsible for Vaquez Polyglobulia. The invention also relates to a first intention diagnostic method for erythrocytosis and thrombocytosis allowing their association with myeloproliferative disorders, or to the detection of the JAK2 V617F variant in myeloproliferative disorders allowing their reclassification in a new nosological group.
    Type: Grant
    Filed: November 2, 2007
    Date of Patent: September 30, 2008
    Assignee: IPSOGEN
    Inventors: William Vainchenker, Valeria Ugo, James Chloe, Jean-Pierre Le Couedic, Nicole Casadevall
  • Patent number: 7425624
    Abstract: Isolated sulfotransferase 1A3 nucleic acid molecules and polypeptides that include nucleotide sequence variants and amino acid sequence variants are described. Methods for determining predisposition to particular clinical conditions and methods for determining sulfonator status also are described.
    Type: Grant
    Filed: January 21, 2003
    Date of Patent: September 16, 2008
    Assignee: Mayo Foundation for Medical Education and Research
    Inventors: Bianca A. Thomae, Eric D. Wieben, Richard M. Weinshilboum
  • Patent number: 7407753
    Abstract: The present invention uncovers a highly significant association of SNPs in the CNR2 locus, encoding the cannabinoid receptor 2 protein, with osteoporosis. Methods and kits for determining predisposition to osteoporosis, improving diagnosis in individuals suspected of having osteoporosis are provided. Also provided a method of identifying a putative osteoporosis-causing genetic mutation in a subject.
    Type: Grant
    Filed: May 24, 2004
    Date of Patent: August 5, 2008
    Assignees: Yissum Research Development Company of the HebrewUniversityofJerusalem, Institut National de la Sante et de la Recherche Medicale
    Inventors: Andreas Zimmer, Meliha Karsak, Marie-Christine De Vernejoul, Itai Bab, Esther Shohami, Raphael Mechoulam
  • Patent number: 7407755
    Abstract: The present invention relates to methods and kits for determining a predisposition and surveillance protocols for developing cancer of various sites due to specific mutation in at least one allele of CHEK2 gene and/or at least one allele of NOD2 gene and/or at least one allele of CDKN2A gene.
    Type: Grant
    Filed: January 18, 2005
    Date of Patent: August 5, 2008
    Inventors: Jan Lubiñski, Janina Suchy, Grzegorz Kurzawski, Tadeusz Dêbniak, Cezary Cybulski
  • Patent number: 7358349
    Abstract: A nucleic acid comprising any one of base sequences set forth in SEQ ID NO:1 to NO:104 in the Sequence Listing and a protein encoded by the nucleic acid, particularly a nucleic acid displaying differential expression levels in hepatoblastoma and normal liver based on comparison therebetween and a protein encoded by the nucleic acid as well as tumor detection utilizing the foregoing.
    Type: Grant
    Filed: August 26, 2002
    Date of Patent: April 15, 2008
    Assignees: Hisamitsu Pharmaceutical Co., Inc., Chiba-Prefecture
    Inventor: Akira Nakagawara
  • Patent number: 7247430
    Abstract: The present invention pertains to polynucleotides derived from M. tuberculosis genes imparting resistance to antibiotics and chemically related compounds. This invention also relates to the use of the polynucleotides as oligonucleotide primers or probes for detecting M. tuberculosis strains that are resistant to antibiotics and related compounds in a biological sample. Kits containing the primers and probes are also provided.
    Type: Grant
    Filed: August 13, 2002
    Date of Patent: July 24, 2007
    Assignee: Institut Pasteur
    Inventor: Brigitte Gicquel
  • Patent number: 7244562
    Abstract: A method for detecting a specific sequence, a mutation and/or a polymorphisms, including a single nucleotide polymorphism (SNP), is based on the use of RecA-like recombinase protein and primer extension (PE) or oligonucleotide ligation assays (OLA). RecA coated, specific DNA oligonucleotide probes (RecA filaments) are used for homology searching in duplex DNA. Location of homologous sequences results in the formation of D-loop or double D-loop structures containing a duplex regions comprising the oligonucleotide probe and one strand of the target DNA. In the case of the PE methods, probes are selected to terminate with their 3? end adjacent to the site of mutation or SNP such that a single nucleotide or terminator addition to the primer will be diagnostic of the mutation or SNP.
    Type: Grant
    Filed: October 30, 2002
    Date of Patent: July 17, 2007
    Assignee: Gene Check, Inc.
    Inventor: Robert E. Wagner, Jr.
  • Patent number: 7229767
    Abstract: Methods for the production and use of stable complexes of duplex nucleic acid molecules and oligonucleotides are presented. These complexes can be used for the detection and purification of a known nucleic acid target as well as the manipulation of a defined nucleic acid target sequence.
    Type: Grant
    Filed: September 26, 2003
    Date of Patent: June 12, 2007
    Assignee: University of Delaware
    Inventors: Eric B. Kmiec, Howard B. Gamper, Michael C. Rice, Michael G. Usher
  • Patent number: 7217519
    Abstract: The present invention describes Histoplasmosis capsulatum chitin synthase nucleic acid and protein sequences as reagents for the detection of H. capsulatum infection. Specifically, the invention describes intron sequences from the H. capsulatum chitin synthase gene which can be used for hybridization-based and PCR-based detection of H. capsulatum infection. In another embodiment, assays for H. capsulatum chitin synthase 2 polypeptide and/or mRNA used as a diagnostic test for H. capsulatum infection and/or histoplasmosis. Also described is the differentiation of H. capsulatum from Blastomyces dermititidis based on detection of intron 1 sequences specific to H. capsulatum chitin synthase 2. The present invention also comprises the production of H. capsulatum strains lacking functional chitin synthase 2 as a means to produce H. capsulatum having reduced pathogenicity.
    Type: Grant
    Filed: November 21, 2003
    Date of Patent: May 15, 2007
    Assignee: The Board of Trustees of the University of Arkansas
    Inventors: Clayton H. Johnson, Joan E. McEwen
  • Patent number: 7052837
    Abstract: The present invention describes Histoplasmosis capsulatum catalase A and catalase P nucleic acid and protein sequences as reagents for the detection of H. capsulatum infection. Specifically, the invention describes intron sequences from the H. capsulatum catalase A (CATA) and catalase P (CATP) genes which can be used for hybridization and PCR based detection of H. capsulatum infection. In another embodiment, assays for H. capsulatum catalase P or catalase A polypeptides are used as diagnostic tests for H. capsulatum infection and histoplasmosis, respectively. Also described is the differentiation of H. capsulatum from Blastomyces dermititidis based on a H. capsulatum catalase P PCR based assay.
    Type: Grant
    Filed: March 13, 2002
    Date of Patent: May 30, 2006
    Assignee: The Board of Trustees of the University of Arkansas
    Inventors: Clayton H. Johnson, J. Lyndal York, Joan E. McEwen
  • Patent number: 6943241
    Abstract: Novel full-length cDNAs are provided. 1970 cDNA derived from human have been isolated. The full-length nucleotide sequences of the cDNA and amino acid sequences encoded by the nucleotide sequences have been determined. Because the cDNA of the present invention are full-length and contain the translation start site, they provide information useful for analyzing the functions of the polypeptide.
    Type: Grant
    Filed: March 25, 2002
    Date of Patent: September 13, 2005
    Assignee: Research Association for Biotechnology
    Inventors: Takao Isogai, Tomoyasu Sugiyama, Tetsuji Otsuki, Ai Wakamatsu, Hiroyuki Sato, Shizuko Ishii, Jun-ichi Yamamoto, Yuuko Isono, Yuri Hio, Kaoru Otsuka, Keiichi Nagai, Ryotaro Irie, Ichiro Tamechika, Naohiko Seki, Tsutomu Yoshikawa, Motoyuki Otsuka, Kenji Nagahari, Yasuhiko Masuho
  • Patent number: 6867001
    Abstract: An objective of this invention is to provide a method which can specifically enrich a desired DNA with a long insert size from a DNA library and can provide a clone of the DNA directly. This invention provides a method of constructing a DNA library having increased proportion of a first double-stranded DNA therein by removing, from an original library containing the first double-stranded DNA to be increased in proportion, a second double-stranded DNA different from the first double-stranded DNA.
    Type: Grant
    Filed: September 24, 2002
    Date of Patent: March 15, 2005
    Assignees: Aisin Cosmos R&D Co., Ltd., Kazusa DNA Research Institute Foundation
    Inventors: Kazuhiro Kondo, Michio Oishi, Osamu Ohara
  • Patent number: 6809075
    Abstract: The present invention is directed to a composition which is used to enhance the elasticity and/or appearance of tissue. Specifically, the present invention is directed to a composition formulated from peptides having low molecular weights and which substantially correspond to sequences found in elastin. These peptides are used in conjunction with or in combination with retinoids, preferably tretinoin.
    Type: Grant
    Filed: May 30, 2000
    Date of Patent: October 26, 2004
    Assignee: Connective Tissue Imagineering LLC
    Inventors: Thomas F. Mitts, Lawrence B. Sandberg