Patents by Inventor Ajikumar Parayil KUMARAN

Ajikumar Parayil KUMARAN has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20220090031
    Abstract: In various aspects, the present invention provides uridine diphosphate-dependent glycosyltransferase (UGT) enzymes capable of catalyzing the transfer of a monosaccharide moiety from a NDP-sugar to the 3? carbon of a sugar moiety of a substrate, such as a terpenoid glycan, thereby functioning as a “1-3 UGT.” In other aspects, the invention provides polynucleotides encoding the 1-3 UGT, and host cells comprising the same. In still other aspects, the invention provides methods for preparing glycosylated substrates, including steviol glycosides, using the enzyme and host cells of this disclosure.
    Type: Application
    Filed: October 6, 2021
    Publication date: March 24, 2022
    Inventors: Jason Eric DONALD, Ajikumar Parayil KUMARAN, Aaron LOVE, Christopher TOOMEY, Christine Nicole S. SANTOS
  • Publication number: 20220073955
    Abstract: The present disclosure relates to methods for producing oxygenated terpenoids, and preparation of compositions and formulations thereof. Polynucleotides, derivative enzymes, and host cells for use in such methods are also provided.
    Type: Application
    Filed: November 22, 2021
    Publication date: March 10, 2022
    Inventors: Ajikumar Parayil Kumaran, Chin Giaw Lim, Liwei Li, Souvik Ghosh, Christopher Pirie, Anthony Qualley, Geoff Marshall-Hill, Martin Preininger
  • Patent number: 11230724
    Abstract: In various aspects and embodiments, the invention provides microbial cells and methods for producing advanced glycosylation products from lower glycosylated intermediates. The microbial cell expresses one or more UDP-dependent glycosyl transferase enzymes in the cytoplasm, for glycosylation of the intermediates. When incubating the microbial strain with a plant extract or fraction thereof comprising the intermediates, these glycosylated intermediates are available for further glycosylation by the cell, and the advanced glycosylation products can be recovered from the media and/or microbial cells.
    Type: Grant
    Filed: July 16, 2019
    Date of Patent: January 25, 2022
    Assignee: MANUS BIO INC.
    Inventors: Ajikumar Parayil Kumaran, Christine Nicole S. Santos, Jason Eric Donald, Mary Elizabeth Fowler, Ryan N. Philippe, Christopher Scott Frei, Aaron Love
  • Publication number: 20220002764
    Abstract: Enzymes involved in cannabinoid biosynthesis are recombinantly expressed in a host cell. The host cell may be a prokaryote (e.g. Escherichia coli) or a eukaryote (e.g. Yarrowia lipolytica). The enzymes include a heterologous cannabigerolic acid synthase as well as additional enzymes involved in the biosynthesis of cannabinoid precursors such as geranyl diphosphate, olivetol, olivetolic acid, divarin and/or divarinic acid. Methods are provided for producing C5-cannabinoids and/or C3-cannabinoids by fermentation of the recombinant host cell. Alternatively, cannabinoids can be produced by biotransformation of cannabinoid precursors in recombinant cells or by disrupted recombinant cells.
    Type: Application
    Filed: November 14, 2019
    Publication date: January 6, 2022
    Inventors: Ryan A. PHILIPPE, Ajikumar Parayil KUMARAN, Christine Nicole S. SANTOS, Lu CHEN
  • Patent number: 11180782
    Abstract: The present disclosure relates to methods for producing oxygenated terpenoids, and preparation of compositions and formulations thereof. Polynucleotides, derivative enzymes, and host cells for use in such methods are also provided.
    Type: Grant
    Filed: October 30, 2019
    Date of Patent: November 23, 2021
    Assignees: Givaudan SA, Manus Biosynthesis, Inc.
    Inventors: Ajikumar Parayil Kumaran, Chin Giaw Lim, Liwei Li, Souvik Ghosh, Christopher Pirie, Anthony Qualley, Geoff Marshall-Hill, Martin Preininger
  • Patent number: 11168309
    Abstract: In various aspects, the present invention provides uridine diphosphate-dependent glycosyltransferase (UGT) enzymes capable of catalyzing the transfer of a monosaccharide moiety from a NDP-sugar to the 3? carbon of a sugar moiety of a substrate, such as a terpenoid glycan, thereby functioning as a “1-3 UGT.” In other aspects, the invention provides polynucleotides encoding the 1-3 UGT, and host cells comprising the same. In still other aspects, the invention provides methods for preparing glycosylated substrates, including steviol glycosides, using the enzyme and host cells of this disclosure.
    Type: Grant
    Filed: June 25, 2020
    Date of Patent: November 9, 2021
    Assignee: MANUS BIO INC.
    Inventors: Jason Eric Donald, Ajikumar Parayil Kumaran, Aaron Love, Christopher Toomey, Christine Nicole S. Santos
  • Publication number: 20210292798
    Abstract: The present invention relates to methods for producing oxygenated terpenoids. Polynucleotides, derivative enzymes, and host cells for use in such methods are also provided.
    Type: Application
    Filed: January 5, 2021
    Publication date: September 23, 2021
    Inventors: Ajikumar Parayil KUMARAN, Chin Giaw LIM, Liwei LI, Souvik GHOSH, Christopher PIRIE, Anthony QUALLEY
  • Publication number: 20210261992
    Abstract: The present invention is related to enzymatic pathways for production of carminic acid, host cells capable of production of carminic acid, and methods for the production of carminic acid and related compounds.
    Type: Application
    Filed: June 12, 2019
    Publication date: August 26, 2021
    Inventors: Ryan Nicholas PHILIPPE, Ajikumar Parayil KUMARAN, Christine Nicole S. SANTOS
  • Publication number: 20210254107
    Abstract: The present disclosure provides methods and compositions for producing rotundone. In various aspects, the present disclosure provides enzymes, polynucleotides encoding said enzymes, and recombinant microbial host cells (or microbial host strains) for the production of rotundone. In some embodiments, the present disclosure provides microbial host cells for producing rotundone at high purity and/or yield, from either enzymatic transformation of ?-guaiene, or from sugar or other carbon source. The present disclosure further provides methods of making products containing rotundone, including flavor or fragrance products, among others.
    Type: Application
    Filed: September 6, 2019
    Publication date: August 19, 2021
    Inventors: RYAN N. PHILIPPE, AJIKUMAR PARAYIL KUMARAN, CHRISTINE NICOLE S. SANTOS, JASON DONALD, STEPHEN SARRIA
  • Publication number: 20210207078
    Abstract: Aspects of the invention provide methods for producing one or more secondary metabolites from microbial culture. In various embodiments, the method comprises culturing a microbial cell producing a secondary metabolite for recovery from a bioreactor medium, the medium comprising an aqueous phase and an extraction phase. The composition of the extraction phase, and the relevant amount with respect to the aqueous phase, enhances production of the secondary metabolite from microbial cells and/or enhances extracellular transfer of the metabolite.
    Type: Application
    Filed: January 19, 2021
    Publication date: July 8, 2021
    Inventors: Aaron LOVE, Adel GHADERI, Jason Eric DONALD, Christine Nicole S. SANTOS, Ajikumar Parayil KUMARAN
  • Publication number: 20210161092
    Abstract: The present invention relates to systems and methods for screening natural products such as secondary metabolites produced by engineered microbial strains.
    Type: Application
    Filed: February 16, 2017
    Publication date: June 3, 2021
    Inventors: Ajikumar Parayil KUMARAN, Abdul Hakkim RAHAMATHULLAH, Deborah MCEWAN, Frederick AUSUBEL
  • Patent number: 10934564
    Abstract: The present invention relates to methods for producing oxygenated terpenoids. Polynucleotides, derivative enzymes, and host cells for use in such methods are also provided.
    Type: Grant
    Filed: August 21, 2015
    Date of Patent: March 2, 2021
    Assignee: MANUS BIO INC.
    Inventors: Ajikumar Parayil Kumaran, Chin Giaw Lim, Liwei Li, Souvik Ghosh, Christopher Pirie, Anthony Qualley
  • Publication number: 20210032669
    Abstract: The present invention provides host cells and methods for making mogrol glycosides, including Mogroside V (Mog. V), Mogroside VI (Mog. VI), Iso-Mogroside V (Isomog. V), and glycosylation products that are minor products in Siraitia grosvenorii. The invention provides engineered enzymes and engineered host cells for producing mogrol glycosylation products, such as Mog, V. Mog. VI, and Isomog. V, at high purity and/or yield. The present technology further provides methods of making products containing mogrol glycosides, such as Mog. V, Mog. VI, and Isomog. V, including food products, beverages, oral care products, sweeteners, and flavoring products.
    Type: Application
    Filed: February 27, 2019
    Publication date: February 4, 2021
    Inventors: Ryan PHILIPPE, Ajikumar Parayil KUMARAN, Christine Nicole S. SANTOS, Michelle N. GOETTGE
  • Publication number: 20210022373
    Abstract: The invention provides methods for making steviol glycosides, including RebM and glycosylation products that are minor products in stevia leaves, and provides enzymes, encoding polynucleotides, and host cells for use in these methods. The invention provides engineered enzymes and engineered host cells for producing steviol glycosylation products, such as RebM, at high purity and/or yield. The invention further provides methods of making products containing steviol glycosides, such as RebM, including food products, beverages, oral care products, sweeteners, and flavoring products.
    Type: Application
    Filed: April 29, 2020
    Publication date: January 28, 2021
    Inventors: Ryan PHILIPPE, Ajikumar Parayil KUMARAN, Jason DONALD, Krishna PATEL, Swati GUPTA, Ryan LIM, Liwei LI
  • Publication number: 20210009968
    Abstract: In various aspects, the present invention provides uridine diphosphate-dependent glycosyltransferase (UGT) enzymes capable of catalyzing the transfer of a monosaccharide moiety from a NDP-sugar to the 3? carbon of a sugar moiety of a substrate, such as a terpenoid glycan, thereby functioning as a “1-3 UGT.” In other aspects, the invention provides polynucleotides encoding the 1-3 UGT, and host cells comprising the same. In still other aspects, the invention provides methods for preparing glycosylated substrates, including steviol glycosides, using the enzyme and host cells of this disclosure.
    Type: Application
    Filed: June 25, 2020
    Publication date: January 14, 2021
    Inventors: Jason Eric DONALD, Ajikumar Parayil KUMARAN, Aaron LOVE, Christopher TOOMEY, Christine Nicole S. SANTOS
  • Publication number: 20210002678
    Abstract: The present disclosure provides microbial cells and methods of producing FOPPA resulting from unique biosynthetic pathways, including biosynthetic pathways based on the phenylalanine/tyrosine biosynthetic branch and biosynthetic pathways based on bacteria metabolism. In particular, the present invention provides methods of producing FOPPA in microbial cells. These methods provide a low-cost, sustainable, and environmentally friendly source for FOPPA.
    Type: Application
    Filed: March 20, 2019
    Publication date: January 7, 2021
    Inventors: Ryan Nicholas PHILIPPE, Ajikumar Parayil KUMARAN, Christine Nicole S. SANTOS
  • Publication number: 20210002672
    Abstract: The invention relates to methods and bacterial strains for making terpene and terpenoid products, the bacterial strains having improved carbon pull through the MEP pathway and to a downstream recombinant synthesis pathway.
    Type: Application
    Filed: August 13, 2020
    Publication date: January 7, 2021
    Inventors: Ajikumar Parayil KUMARAN, Ryan LIM, Jason DONALD, Hsien-Chung TSENG, Christine Nicole S. SANTOS, Ryan PHILIPPE
  • Publication number: 20200377865
    Abstract: The present invention relates to the production of chemical species in bacterial host cells. Particularly, the present invention provides for the production of chemical species in Escherichia coli (E. coli) host cells that functionally express engineered P450 enzymes.
    Type: Application
    Filed: August 11, 2020
    Publication date: December 3, 2020
    Inventors: Jason DONALD, Christopher PIRIE, Liwei LI, Huey-Ming MAK, Srishti TIBREWALA, Ajikumar Parayil KUMARAN
  • Publication number: 20200347425
    Abstract: The present invention provides engineered cells and methods for making high purity steviol glycosides, including RebM. In some aspects, the present invention provides host cells, such as bacterial cells (including but not limited to E. coli), that are engineered to overexpress and/or delete or inactivate one or more steviol glycoside transport proteins. The bacterial cells selectively export RebM, or other specific combination of steviol glycosides, out of the cell to increase productivity and reduce production costs associated with downstream purification. Non-target steviol glycosides are not transported to the extracellular medium in significant amounts.
    Type: Application
    Filed: November 15, 2018
    Publication date: November 5, 2020
    Inventors: Ryan PHILIPPE, Ajikumar Parayil KUMARAN, Christine Nicole S. SANTOS
  • Publication number: 20200299735
    Abstract: In various aspects and embodiments, the invention relates to bacterial strains and methods for making terpene and terpenoid products. The invention provides bacterial strains with improved carbon flux through the MEP pathway, to thereby increase terpene and/or terpenoid product yield by fermentation with carbon sources such as glucose.
    Type: Application
    Filed: April 29, 2020
    Publication date: September 24, 2020
    Inventors: Ajikumar Parayil KUMARAN, Chin-Giaw LIM, Souvik GHOSH, Christopher PIRIE, Jason DONALD, Aaron LOVE, Hong NAN, Hsien-Chung TSENG, Christine Nicole S. SANTOS, Ryan PHILIPPE