Patents by Inventor Akihiro Ohkubo

Akihiro Ohkubo has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 7943758
    Abstract: Methods of synthesizing nucleic acid oligomers on a solid-phase support having a 3?-end nucleoside unit introduced thereon-as represented by formula II: wherein of formula II represents a 2?-deoxyribonucleoside or its N-protected derivative, the substituent —O—(R1)Si(R2)—(C6H3R6)—(CH2)n—O—P(OR3)XO)—(CH2)n is attached at the 3? position of the sugar moiety of the nucleoside substituent; each of R1 and R2 is an alkyl or optionally substituted aryl group, wherein the optionally substituted aryl group has a substituent selected from the group consisting of C1-4 alkyl, nitro, cyano, halo and methoxyl; R3 is a protecting group; X is S or O; R7 is H or 4,4?-dimethoxytrityl; each n is an integer of from 1 to 5; and the solid-phase support has hydroxyl groups on its surface.
    Type: Grant
    Filed: February 10, 2005
    Date of Patent: May 17, 2011
    Assignee: Japan Science and Technology Agency
    Inventors: Mitsuo Sekine, Kohji Seio, Akihiro Ohkubo
  • Patent number: 7851157
    Abstract: To provide an oligonucleotide derivative that can be used without a problem of falling of a DNA probe from a support. The oligonucleotide derivative of the present invention is represented by the following General Formula (1). The oligonucleotide derivative of the present invention can be used in a DNA chip, a microarray, and so on and further used in a method of detecting gene and a method of regulating gene expression, for example.
    Type: Grant
    Filed: August 24, 2007
    Date of Patent: December 14, 2010
    Assignee: Tokyo Institute of Technology
    Inventors: Mitsuo Sekine, Kohji Seio, Akihiro Ohkubo, Kazushi Sakamoto, Takeshi Sasami
  • Patent number: 7807821
    Abstract: A phosphoramidite method for the synthesis of a nucleic acid oligomer without protecting the base moiety characterized in that a 3? or 5? hydroxyl group of a nucleotide is reacted with a nucleoside phosphoramidite, a cyclonucleoside phosphoramidite, a 2?-substituted nucleoside phosphoramidite, a 4?-substituted nucleoside phosphoramidite, or a 2?,4?-di-substituted nucleoside phosphoramidite to produce a phosphodiester linkage. The phosphoramidite is contacted with an activator containing both a) hydroxybenzotriazole-1-ol (HOBt), a mono-substituted HOBt, a di-substituted HOBt, or a di-substituted phenol and b) imidazole, tetrazole, benzimidazoletriflate (BIT), 4-ethylthiotetrazole, imidazolium triflate(trifluoromethane sulfonate) or 4,5-dicyanoimidazole.
    Type: Grant
    Filed: February 24, 2005
    Date of Patent: October 5, 2010
    Assignee: Japan Science and Technology Agency
    Inventors: Mitsuo Sekine, Kohji Seio, Akihiro Ohkubo
  • Patent number: 7786296
    Abstract: The purpose of the invention is to develop a silyl linker that can be efficiently introduced on a solid-phase support used for the synthesis of nucleic acid oligomers such as DNA. The present invention relates to a silyl linker for use in the solid-phase synthesis of nucleic acid, comprised of a compound of the general formula or its ester or salt: H—(R1)Si(R2)-(C6H4)—CONH-(A)-COOH??(I) wherein each of R1 and R2 is an alkyl or aryl group, and (A) represents a spacer moiety; a 3?-end nucleoside unit having said compound linked via an oxygen atom to the 3-position of a sugar of the nucleoside or its derivative, a solid-phase support having the 3?-end nucleoside unit, and a method for synthesis of nucleic acid oligomer with the use of said solid-phase support.
    Type: Grant
    Filed: February 10, 2005
    Date of Patent: August 31, 2010
    Assignee: Japan Science and Technology Agency
    Inventors: Mitsuo Sekine, Kohji Seio, Akihiro Ohkubo
  • Publication number: 20080051571
    Abstract: The purpose of the invention is to develop a silyl linker that can be efficiently introduced on a solid-phase support used for the synthesis of nucleic acid oligomers such as DNA. The present invention relates to a silyl linker for use in the solid-phase synthesis of nucleic acid, comprised of a compound of the general formula or its ester or salt: H—(R1)Si(R2)—(C6H4)—CONH-(A)-COOH ??(I) wherein each of R1 and R2 is an alkyl or aryl group, and (A) represents a spacer moiety; a 3?-end nucleoside unit having said compound linked via an oxygen atom to the 3-position of a sugar of the nucleoside or its derivative, a solid-phase support having the 3?-end nucleoside unit, and a method for synthesis of nucleic acid oligomer with the use of said solid-phase support.
    Type: Application
    Filed: February 10, 2005
    Publication date: February 28, 2008
    Applicant: Japan Science and Technology Agency
    Inventors: Mitsuo Sekine, Kohji Seio, Akihiro Ohkubo
  • Publication number: 20080039620
    Abstract: The purpose of the present invention is therefore to provide a method for binding a 3?-end nucleoside unit comprising any base to a hydroxyl group on a solid-phase support under completely the same condition as in DNA chain elongation reaction. The present invention relates to a 3?-end nucleoside unit comprising phosphoramidite that is a compound represented by the following formula: (N)—O—(R1)Si(R2)-(C6H4)—(CH2)n-O—P(OR3)N(R4)(R5)??(I) wherein (N) represents any nucleoside or its derivative, each of R1, R2, R4 and R5 is an alkyl or aryl group, R3 is a phosphate-protecting group, and n is an integer of from 1 to 5; a solid-phase support having said 3?-end nucleoside unit; and a method for the synthesis of a nucleic acid oligomer with the use of said solid-phase support.
    Type: Application
    Filed: February 10, 2005
    Publication date: February 14, 2008
    Applicant: Japan Science and Technology Agency
    Inventors: Mitsuo Sekine, Kohji Seio, Akihiro Ohkubo
  • Patent number: D801479
    Type: Grant
    Filed: August 18, 2016
    Date of Patent: October 31, 2017
    Assignee: SMC Corporation
    Inventors: Yoshitada Doi, Akihiro Ohkubo, Takahiro Kimura