Patents by Inventor Amnon Ptashek

Amnon Ptashek has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20210257052
    Abstract: A system, method and apparatus for executing a bioinformatics analysis on genetic sequence data is provided. Particularly, a genomics analysis platform for executing a sequence analysis pipeline is provided. The genomics analysis platform includes one or more of a first integrated circuit, where each first integrated circuit forms a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of the sequence analysis pipeline.
    Type: Application
    Filed: February 2, 2021
    Publication date: August 19, 2021
    Inventors: Pieter Van Rooyen, Michael Ruehle, Rami Mehio, Gavin Stone, Mark Hahm, Eric Ojard, Amnon Ptashek
  • Patent number: 11049588
    Abstract: A system, method and apparatus for executing a bioinformatics analysis on genetic sequence data is provided. Particularly, a genomics analysis platform for executing a sequence analysis pipeline is provided. The genomics analysis platform includes one or more of a first integrated circuit, where each first integrated circuit forms a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of the sequence analysis pipeline.
    Type: Grant
    Filed: August 31, 2018
    Date of Patent: June 29, 2021
    Assignee: Illumina, Inc.
    Inventors: Pieter van Rooyen, Michael Ruehle, Rami Mehio, Gavin Stone, Mark Hahm, Eric Ojard, Amnon Ptashek
  • Publication number: 20210183468
    Abstract: Systems, methods, and computer programs for analyzing genetic sequence data is disclosed. In one aspect, the system can include one or more of a first integrated circuit, with each first integrated circuit forming a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of a sequence analysis pipeline. Additionally, the system can include one or more second integrated circuits, with each second integrated circuit forming a field programmable gate array (FPGA). The FPGA can be configured by firmware to arrange a set of hardwired digital logic circuits to perform a second set of genomic processing stages of the sequence analysis pipeline, the set of hardwired digital logic circuits of each FPGA being arranged as a set of processing engines to perform the second set of genomic processing stages.
    Type: Application
    Filed: February 2, 2021
    Publication date: June 17, 2021
    Inventors: Mark David Hahm, Jacobus de Beer, Varun Jain, Rami Mehio, Eric Ojard, Michael Ruehle, Amnon Ptashek, Severine Catreux, Arun Visvanath
  • Publication number: 20190130998
    Abstract: A system, method and apparatus for executing a bioinformatics analysis on genetic sequence data is provided. Particularly, a genomics analysis platform for executing a sequence analysis pipeline is provided. The genomics analysis platform includes one or more of a first integrated circuit, where each first integrated circuit forms a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of the sequence analysis pipeline.
    Type: Application
    Filed: August 31, 2018
    Publication date: May 2, 2019
    Inventors: Pieter van Rooyen, Michael Ruehle, Rami Mehio, Gavin Stone, Mark Hahm, Eric Ojard, Amnon Ptashek
  • Patent number: 10068052
    Abstract: A system, method and apparatus for executing a bioinformatics analysis on genetic sequence data is provided. Particularly, a genomics analysis platform for executing a sequence analysis pipeline is provided. The genomics analysis platform includes one or more of a first integrated circuit, where each first integrated circuit forms a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of the sequence analysis pipeline.
    Type: Grant
    Filed: February 27, 2018
    Date of Patent: September 4, 2018
    Assignee: Edico Genome Corporation
    Inventors: Pieter van Rooyen, Michael Ruehle, Rami Mehio, Gavin Stone, Mark David Hahm, Eric Ojard, Amnon Ptashek
  • Patent number: 10049179
    Abstract: A system, method and apparatus for executing a bioinformatics analysis on genetic sequence data is provided. Particularly, a genomics analysis platform for executing a sequence analysis pipeline is provided. The genomics analysis platform includes one or more of a first integrated circuit, where each first integrated circuit forms a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of the sequence analysis pipeline.
    Type: Grant
    Filed: July 6, 2017
    Date of Patent: August 14, 2018
    Assignee: EDICO GENOME, CORP.
    Inventors: Pieter van Rooyen, Michael Ruehle, Rami Mehio, Gavin Stone, Mark Hahm, Eric Ojard, Amnon Ptashek
  • Publication number: 20180196916
    Abstract: A system, method and apparatus for executing a bioinformatics analysis on genetic sequence data is provided. Particularly, a genomics analysis platform for executing a sequence analysis pipeline is provided. The genomics analysis platform includes one or more of a first integrated circuit, where each first integrated circuit forms a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of the sequence analysis pipeline.
    Type: Application
    Filed: March 7, 2018
    Publication date: July 12, 2018
    Inventors: Pieter van Rooyen, Michael Ruehle, Rami Mehio, Gavin Stone, Mark David Hahm, Eric Ojard, Amnon Ptashek
  • Publication number: 20180189444
    Abstract: A system, method and apparatus for executing a bioinformatics analysis on genetic sequence data is provided. Particularly, a genomics analysis platform for executing a sequence analysis pipeline is provided. The genomics analysis platform includes one or more of a first integrated circuit, where each first integrated circuit forms a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of the sequence analysis pipeline.
    Type: Application
    Filed: February 27, 2018
    Publication date: July 5, 2018
    Inventors: Pieter van Rooyen, Michael Ruehle, Rami Mehio, Gavin Stone, Mark David Hahm, Eric Ojard, Amnon Ptashek
  • Publication number: 20180121601
    Abstract: A system, method and apparatus for executing a bioinformatics analysis on genetic sequence data is provided. Particularly, a genomics analysis platform for executing a sequence analysis pipeline is provided. The genomics analysis platform includes one or more of a first integrated circuit, where each first integrated circuit forms a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of the sequence analysis pipeline.
    Type: Application
    Filed: October 27, 2017
    Publication date: May 3, 2018
    Inventors: Mark David Hahm, Jacobus de Beer, Varun Jain, Rami Mehio, Eric Ojard, Michael Ruehle, Amnon Ptashek, Severine Catreux, Arun Visvanath
  • Publication number: 20170308644
    Abstract: A system, method and apparatus for executing a bioinformatics analysis on genetic sequence data is provided. Particularly, a genomics analysis platform for executing a sequence analysis pipeline is provided. The genomics analysis platform includes one or more of a first integrated circuit, where each first integrated circuit forms a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of the sequence analysis pipeline.
    Type: Application
    Filed: July 6, 2017
    Publication date: October 26, 2017
    Inventors: Pieter van Rooyen, Michael Ruehle, Rami Mehio, Gavin Stone, Mark Hahm, Eric Ojard, Amnon Ptashek
  • Publication number: 20170270245
    Abstract: A system, method and apparatus for executing a bioinformatics analysis on genetic sequence data is provided. Particularly, a genomics analysis platform for executing a sequence analysis pipeline is provided. The genomics analysis platform includes one or more of a first integrated circuit, where each first integrated circuit forms a central processing unit (CPU) that is responsive to one or more software algorithms that are configured to instruct the CPU to perform a first set of genomic processing steps of the sequence analysis pipeline.
    Type: Application
    Filed: June 7, 2017
    Publication date: September 21, 2017
    Inventors: Pieter van Rooyen, Mike Ruehle, Rami Mehio, Gavin Stone, Mark Hahm, Eric Ojard, Amnon Ptashek
  • Publication number: 20150161535
    Abstract: A system for automating coordinated care management by mapping medical guidelines to clinical workflows and logistical operations may be provided. The system may include a mapping system, a medical guidelines database, a clinical workflow database and a logistical workflow database. The mapping system may receive medical guidelines from the medical guidelines database, generate clinical workflows to be stored in the clinical workflow database, and generate logistical workflows to be stored in the logistical workflow database. The logistical workflows can be generated from clinical workflows or directly from medical guidelines. The system may include a communications system that automatically manages communications between participants in a healthcare system using computer code generated based on the logistical workflows.
    Type: Application
    Filed: December 6, 2013
    Publication date: June 11, 2015
    Applicant: Gary and Mary West Health Institute
    Inventors: Amnon Ptashek, Erik Tyrrell-Knott, Vikas Tandon, Joseph Martin Smith, Scott Edward Cassidy
  • Publication number: 20080039070
    Abstract: A system for testing communications between an application executed on a mobile terminal and a server seated on a remote network includes a probe concentrator for receiving a communication from the mobile terminal and transmitting the communication to a remote probe, the remote probe configured to transmit the communication to a remote server via a remote network, and receive a responsive communication from the remote server, and transmit it to the probe concentrator which transmits it further to the mobile terminal. The probe concentrator may include an analysis block to analyze captured data and generate analysis results therefrom.
    Type: Application
    Filed: June 29, 2006
    Publication date: February 14, 2008
    Inventor: Amnon Ptashek
  • Publication number: 20070274233
    Abstract: Methods and systems for techniques to enable multi peer-to-peer services are described. Terminals are enabled to recognize their peer terminals and create multipoint to multipoint peer to peer services in each of the related network protocol layers. Presence and recognition of the peers can be done by means of pre-configuration, the use of control points configuration, or any Ad-Hoc mechanism. Once a multipoint to multipoint peer to peer network is created, a set of applications and services may be utilized.
    Type: Application
    Filed: May 24, 2007
    Publication date: November 29, 2007
    Inventors: Amnon Ptashek, Balaji Tamirisa