Patents by Inventor Anant Madabhushi

Anant Madabhushi has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 10575774
    Abstract: One embodiment include an image acquisition circuit that accesses a pre-treatment and a post-treatment image of a region of tissue demonstrating non-small cell lung cancer (NSCLC), a segmentation and registration circuit that annotates the tumor represented in the images, and that registers the pre-treatment image with the post-treatment image; a feature extraction circuit that selects a set of pre-treatment and a set of post-treatment radiomic features from the registered image; a delta radiomics circuit that generates a set of delta radiomic features by computing a difference between the set of post-treatment radiomic features and the set of pre-treatment radiomic features; and a classification circuit that generates a probability that the region of tissue will respond to immunotherapy based on the difference, and that classifies the region of tissue as a responder or non-responder. Embodiments may generate an immunotherapy treatment plan based, at least in part, on the classification.
    Type: Grant
    Filed: December 22, 2017
    Date of Patent: March 3, 2020
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Yuanqi Xie, Vamsidhar Velcheti
  • Publication number: 20200027208
    Abstract: Embodiments facilitate prediction of anti-vascular endothelial growth (anti-VEGF) therapy response in DME or RVO patients. A first set of embodiments discussed herein relates to training of a machine learning classifier to determine a prediction for response to anti-VEGF therapy based on a vascular network organization via Hough transform (VaNgOGH) descriptor generated based on FA images of tissue demonstrating DME or RVO. A second set of embodiments discussed herein relates to determination of a prediction of response to anti-VEGF therapy for a DME or RVO patient (e.g., non-rebounder vs. rebounder, response vs. non-response) based on a VaNgOGH descriptor generated based on FA imagery of the patient.
    Type: Application
    Filed: May 17, 2019
    Publication date: January 23, 2020
    Inventors: Anant Madabhushi, Prateek Prasanna, Justis Ehlers
  • Publication number: 20200027209
    Abstract: Embodiments facilitate prediction of anti-vascular endothelial growth (anti-VEGF) therapy response in DME patients. A first set of embodiments discussed herein relates to training of a machine learning classifier to determine a prediction for response to anti-VEGF therapy based on a set of graph-network features and a set of morphological features generated based on FA images of tissue demonstrating DME. A second set of embodiments discussed herein relates to determination of a prediction of response to anti-VEGF therapy for a DME patient (e.g., non-rebounder vs. rebounder, response vs. non-response) based on a set of graph-network features and a set of morphological features generated based on FA imagery of the patient.
    Type: Application
    Filed: May 17, 2019
    Publication date: January 23, 2020
    Inventors: Anant Madabhushi, Prateek Prasanna, Justis Ehlers
  • Patent number: 10540570
    Abstract: Embodiments predict prostate cancer (PCa) biochemical recurrence (BCR) employing an image acquisition circuit that accesses a first pre-treatment image and a second pre-treatment image of a region of tissue demonstrating PCa, a distension feature circuit that extracts a set of distension features from the first pre-treatment image, and computes a first probability of PCa BCR based on the set of distension features, a radiomics circuit that extracts a set of radiomics features from the second pre-treatment image, and computes a second probability of PCa recurrence based on the set of radiomics feature, a combined tumor induced organ distension with tumor radiomics (COnTRa) circuit that computes a joint probability that the region of tissue will experience PCa BCR based on the first probability and the second probability, and a display circuit that displays the joint probability.
    Type: Grant
    Filed: March 16, 2018
    Date of Patent: January 21, 2020
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Rakesh Shiradkar, Soumya Ghose
  • Publication number: 20200011950
    Abstract: Embodiments facilitate generation of a prediction of long-term survival (LTS) or short-term survival (STS) of Glioblastoma (GBM) patients. A first set of embodiments discussed herein relates to training of a machine learning classifier to determine a prediction for LTS or STS based on a radiographic-deformation and textural heterogeneity (r-DepTH) descriptor generated based on radiographic images of tissue demonstrating GBM. A second set of embodiments discussed herein relates to determination of a prediction of disease outcome for a GBM patient of LTS or STS based on an r-DepTH descriptor generated based on radiographic imagery of the patient.
    Type: Application
    Filed: May 3, 2019
    Publication date: January 9, 2020
    Inventors: Pallavi Tiwari, Anant Madabhushi, Prateek Prasanna
  • Patent number: 10528848
    Abstract: Methods, apparatus, and other embodiments predict heart failure from WSIs of cardiac histopathology using a deep learning convolutional neural network (CNN). One example apparatus includes a pre-processing circuit configured to generate a pre-processed WSI by downsampling a digital WSI; an image acquisition circuit configured to randomly select a set of non-overlapping ROIs from the pre-processed WSI, and configured to provide the set of non-overlapping ROIs to a deep learning circuit; a deep learning circuit configured to generate an image-level probability that a member of the set of non-overlapping ROIs is a failure/abnormal pathology ROI using a CNN; and a classification circuit configured to generate a patient-level probability that the patient from which the region of tissue represented in the WSI was acquired is experiencing failure or non-failure based, at least in part, on the image-level probability.
    Type: Grant
    Filed: October 31, 2017
    Date of Patent: January 7, 2020
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Jeffrey John Nirschl, Andrew Janowczyk, Eliot G. Peyster, Michael D. Feldman, Kenneth B. Margulies
  • Publication number: 20200005931
    Abstract: Embodiments facilitate stratification of a patient according to prostate cancer (PCa) risk. A first set of embodiments relates to training of a machine learning classifier to compute a probability that a patient has a low-risk of PCa progression based on intratumoral radiomic features and peritumoral radiomic features extracted from multi-parametric magnetic resonance imaging (mpMRI) images. A second set of embodiments relates to classifying a patient as low-risk of PCa progression, or high-risk of PCa progression, based on radiomic features extracted from mpMRI imagery of the patient.
    Type: Application
    Filed: April 26, 2019
    Publication date: January 2, 2020
    Inventors: Anant Madabhushi, Ahmad Algohary, Rakesh Shiradkar
  • Publication number: 20200000396
    Abstract: Embodiments facilitate predicting a patient prostate cancer (PCa) DECIPHER risk group. A first set of embodiments relates to training of a machine learning classifier to compute a probability that a patient is a member of a DECIPHER low/intermediate risk group based on radiomic features extracted from bi-parametric magnetic resonance imaging (bpMRI) images. A second set of embodiments relates to classifying a patient as a member of DECIPHER low/intermediate risk group, or DECIPHER high-risk group, based on radiomic features extracted from bpMRI imagery of the patient.
    Type: Application
    Filed: April 26, 2019
    Publication date: January 2, 2020
    Inventors: Anant Madabhushi, Lin Li, Anderi Purysko, Rakesh Shiradkar
  • Patent number: 10503959
    Abstract: Embodiments include an image acquisition circuit configured to access an image of a region of tissue demonstrating cancerous pathology, a nuclei detection and graphing circuit configured to detect cellular nuclei represented in the image; and construct a nuclear sub-graph based on the detected cellular nuclei, where a node of the sub-graph is a nuclear centroid of a cellular nucleus; a cell run length (CRF) circuit configured to compute a CRF vector based on the sub-graph; compute a set of CRF features based on the CRF vector and the sub-graph; and generate a CRF signature based, at least in part, on the set of CRF features; and a classification circuit configured to compute a probability that the region of tissue will experience cancer progression, based, at least in part, on the CRF signature; and generate a classification of the region of tissue as a progressor or non-progressor.
    Type: Grant
    Filed: February 21, 2018
    Date of Patent: December 10, 2019
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Cheng Lu
  • Patent number: 10492723
    Abstract: Embodiments classify a region of tissue demonstrating non-small cell lung cancer using quantified vessel tortuosity (QVT). One example apparatus includes annotation circuitry configured to segment a lung region from surrounding anatomy in the region of tissue represented in a radiological image and segment a nodule from the lung region by defining a nodule boundary; vascular segmentation circuitry configured to generate a three dimensional (3D) segmented vasculature by segmenting a vessel associated with the nodule, and to identify a center line of the 3D segmented vasculature; QVT feature extraction circuitry configured to extract a set of QVT features from the radiological image; and classification circuitry configured to compute a probability that the region of tissue will respond to immunotherapy and generate a classification that the region of tissue is a responder or a non-responder based, at least in part, on the probability.
    Type: Grant
    Filed: January 30, 2018
    Date of Patent: December 3, 2019
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Mehdi Alilou, Vamsidhar Velcheti
  • Publication number: 20190357869
    Abstract: Embodiments discussed herein facilitate generation of a prognosis for recurrence or non-recurrence of atrial fibrillation (AF) after pulmonary vein isolation (PVI). A first set of embodiments discussed herein relates to training of a machine learning classifier to determine a prognosis for AF after PVI based on radiographic images, alone or in combination with clinical features. A second set of embodiments discussed herein relates to determination of a prognosis for a patient for AF after PVI based on radiographic images, alone or in combination with clinical features.
    Type: Application
    Filed: March 25, 2019
    Publication date: November 28, 2019
    Inventors: Anant Madabhushi, Michael LaBarbera, Thomas Atta-Fosu, Mina Chung
  • Publication number: 20190357870
    Abstract: Embodiments include controlling a processor to access a radiological image of a region of lung tissue, where the radiological image includes a ground glass (GGO) nodule; define a tumoral region by segmenting the GGO nodule, where defining the tumoral region includes defining a tumoral boundary; define a peri-tumoral region based on the tumoral boundary; extract a set of radiomic features from the peri-tumoral region and the tumoral region; provide the set of radiomic features to a machine learning classifier trained to distinguish minimally invasive adenocarcinoma (MIA) and adenocarcinoma in situ (AIS) from invasive adenocarcinoma; receive, from the machine learning classifier, a probability that the GGO nodule is invasive adenocarcinoma, where the machine learning classifier computes the probability based on the set of radiomic features; generate a classification of the GGO nodule as MIA or AIS, or invasive adenocarcinoma, based, at least in part, on the probability; and display the classification.
    Type: Application
    Filed: March 22, 2019
    Publication date: November 28, 2019
    Inventors: Anant Madabhushi, Pranjal Vaidya, Kaustav Bera
  • Publication number: 20190347789
    Abstract: Embodiments access a pre-immunotherapy image of tissue demonstrating NSCLC including a tumor and a peritumoral region; extract a first set of radiomic features from the image; provide the first set of radiomic features to a first machine learning classifier; receive a first probability from the first classifier that the tissue is hyperprogressor (HP) or non-responder (R); if the first probability that the tissue is within a threshold: generate a first classification of the ROT as HP or non-R based on the first probability; if the first probability is not within the threshold: extract a second set of radiomic features from the peritumoral region and provide the second set to a second machine learning classifier; receive a second probability from the second classifier that the tissue is HP or R; generate a second classification of the tissue as HP or R based on the second probability; and display the classification.
    Type: Application
    Filed: March 11, 2019
    Publication date: November 14, 2019
    Inventors: Pranjal Vaidya, Kaustav Bera, Vamsidhar Velcheti, Anant Madabhushi
  • Patent number: 10470734
    Abstract: Embodiments associated with classifying a region of tissue using features extracted from nodules and surrounding structures. One example apparatus includes a feature extraction circuit configured to automatically extract a first set of quantitative features from a nodule represented in at least one CT image, and automatically extract a second set of quantitative features from the lung parenchyma region immediately surrounding the nodule represented in the at least one CT image; a feature selection circuit configured to select an optimally predictive feature set from the first set of quantitative features and the second set of quantitative features; and a training circuit configured to train a classifier using the optimally predictive feature set to assign malignancy risk to a lung nodule represented in a CT image of a region of tissue demonstrating lung nodules. A prognosis or treatment plan may be provided based on the malignancy risk.
    Type: Grant
    Filed: July 24, 2018
    Date of Patent: November 12, 2019
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Mahdi Orooji, Mirabela Rusu, Philip Linden, Robert Gilkeson, Nathaniel Mason Braman, Mehdi Alilou
  • Patent number: 10458895
    Abstract: Methods, apparatus, and other embodiments predict response to pemetrexed based chemotherapy. One example apparatus includes an image acquisition circuit that acquires a radiological image of a region of tissue demonstrating NSCLC that includes a region of interest (ROI) defining a tumoral volume, a peritumoral volume definition circuit that defines a peritumoral volume based on the boundary of the ROI and a distance, a feature extraction circuit that extracts a set of discriminative tumoral features from the tumoral volume, and a set of discriminative peritumoral features from the peritumoral volume, and a classification circuit that classifies the ROI as a responder or a non-responder using a machine learning classifier based, at least in part, on the set of discriminative tumoral features and the set of discriminative peritumoral features.
    Type: Grant
    Filed: June 2, 2017
    Date of Patent: October 29, 2019
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Vamsidhar Velcheti, Mahdi Orooji, Sagar Rakshit, Mehdi Alilou, Niha Beig
  • Patent number: 10441225
    Abstract: Embodiments include operations, apparatus, methods and other embodiments that access a baseline CT image of a region of tissue (ROT) demonstrating non-small cell lung cancer (NSCLC), segment a tumoral region represented in the baseline CT image; define a peritumoral region by dilating the tumoral boundary; extract a set of tumoral radiomic features from the tumoral region, a set of peritumoral radiomic features from the peritumoral region, and a set of clinico-pathologic features from the baseline CT image; provide the set of tumoral radiomic features, peritumoral radiomic features, and clinico-pathologic features to a machine learning classifier; receive, from the machine learning classifier, a time-to-recurrence post trimodality therapy (TMT) prediction, based on the set of tumoral radiomic features, peritumoral radiomic features, and clinico-pathologic features; generate a classification of the ROT as an MPR responder or MPR non-responder based, at least in part, on the time-to-recurrence post-TMT predicti
    Type: Grant
    Filed: December 31, 2018
    Date of Patent: October 15, 2019
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Mohammadhadi Khorrami, Vamsidhar Velcheti
  • Patent number: 10441215
    Abstract: One embodiment includes an image acquisition circuit that accesses a pre-treatment and a post-treatment image of a region of tissue demonstrating non-small cell lung cancer (NSCLC), a segmentation and registration circuit that annotates the tumor represented in the images, and that registers the pre-treatment image with the post-treatment image; a feature extraction circuit that selects a set of pre-treatment and a set of post-treatment quantitative vessel tortuosity (QVT) features from the registered image; a delta-QVT circuit that generates a set of delta-QVT features by computing a difference between the set of post-treatment QVT features and the set of pre-treatment QVT features; and a classification circuit that generates a probability that the region of tissue will respond to immunotherapy based on the difference, and that classifies the region of tissue as a responder or non-responder. Embodiments may generate an immunotherapy treatment plan based on the classification.
    Type: Grant
    Filed: February 9, 2018
    Date of Patent: October 15, 2019
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Yuanqi Xie, Vamsidhar Velcheti
  • Publication number: 20190290233
    Abstract: Embodiments access a set of radiological images acquired from a population of subjects, where a member of the set of radiological images includes a left atrium (LA) region; construct a statistical shape differential atlas from the images; generate a template LA model from the statistical shape differential atlas, where the template LA model includes a site of interest (SOI); acquire a pre-ablation radiological image of a region of tissue in a patient demonstrating atrial fibrillation (AF) pathology; generate a patient LA model from the pre-ablation image; compute a deformation field that registers the SOI to the patient LA model using deformable registration; compute a patient feature vector based on the deformation field; generate an AF probability score for the patient based on the feature vector; generate a classification of the patient based, at least in part, on the AF probability score; and display the classification or the AF probability score.
    Type: Application
    Filed: March 22, 2019
    Publication date: September 26, 2019
    Inventors: Anant Madabhushi, Thomas Atta-Fosu, Soumya Ghose
  • Publication number: 20190295721
    Abstract: Embodiments discussed herein facilitate generation of a prognosis for a medical condition based on determination of one or more histomorphometric features for tiles of a whole slide image (WSI) that have been identified as the most prognostically significant tiles of the WSI. A first set of embodiments discussed herein relates to training of a fully convolutional network (FCN) to determine the prognostic significance of pixels of a WSI. A second set of embodiments discussed herein relates to determination of a prognosis based on analysis of regions identified as the most prognostically significant by a trained FCN.
    Type: Application
    Filed: March 20, 2019
    Publication date: September 26, 2019
    Inventors: Anant Madabhushi, Xiangxue Wang
  • Publication number: 20190287243
    Abstract: Embodiments access a radiological image of tissue having a tumoral volume and a peritumoral volume; define a vasculature associated with the tumoral volume; generate a Cartesian two-dimensional (2D) vessel network representation; compute a first set of localized Hough transforms based on the Cartesian 2D vessel network representation; generate a first aggregated set of peak orientations based on the first set of Hough transforms; generate a spherical 2D vessel network representation; compute a second set of localized Hough transforms based on the spherical 2D vessel network representation; generate a second aggregated set of peak orientations based on the second set of Hough transforms; generate a vascular network organization descriptor based on the aggregated peak orientations; compute a probability that the tissue is a member of a positive class based on the vascular network organization descriptor; classify the ROI based on the probability; and display the classification.
    Type: Application
    Filed: March 15, 2019
    Publication date: September 19, 2019
    Inventors: Anant Madabhushi, Nathaniel Braman, Prateek Prasanna