Patents by Inventor Andrew Hugin Thompson

Andrew Hugin Thompson has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11453621
    Abstract: The present invention relates to a set of two or more mass labels, wherein each mass label comprises the formula: X-L-M-Re wherein X is a reporter moiety having an exact mass, L is a bond cleavable by collision in a mass spectrometer, M is a mass modifier, and Re is a) a reactive functionality for attaching the mass label to an analyte or b) the analyte, wherein each mass label in the set has an integer mass, wherein each mass label in the set has the same integer mass, and wherein the set comprises two or more subsets of mass labels, each subset comprising one, two or more mass labels, and wherein, when the subset comprises two or more mass labels, the exact mass of the reporter moiety X of each mass label in the subset is different from the exact mass of the reporter moiety X of the mass labels in the same subset and in all other subsets, and wherein each mass label is distinguishable by mass spectrometry.
    Type: Grant
    Filed: December 9, 2016
    Date of Patent: September 27, 2022
    Assignee: ELECTROPHORETICS LIMITED
    Inventor: Andrew Hugin Thompson
  • Patent number: 11360095
    Abstract: The present invention relates to a set of two or more mass labels, wherein each mass label comprises the formula: X-L-M-Re wherein X is a reporter moiety having an exact mass, L is a bond cleavable by collision in a mass spectrometer, M is a mass modifier, and Re is a) a reactive functionality for attaching the mass label to an analyte or b) the analyte, wherein each mass label in the set has an integer mass, wherein each mass label in the set has the same integer mass, and wherein the set comprises two or more subsets of mass labels, each subset comprising one, two or more mass labels, and wherein, when the subset comprises two or more mass labels, the exact mass of the reporter moiety X of each mass label in the subset is different from the exact mass of the reporter moiety X of the mass labels in the same subset and in all other subsets, and wherein each mass label is distinguishable by mass spectrometry.
    Type: Grant
    Filed: December 9, 2016
    Date of Patent: June 14, 2022
    Assignee: ELECTROPHORETICS LIMITED
    Inventor: Andrew Hugin Thompson
  • Patent number: 10697976
    Abstract: The present invention provides a method for labelling one or more analytes in a sample, the method comprising: a) contacting the sample with one or more bifunctional linker reagents having the general formula Re1-L1-Re2, wherein Re1 is a first reactive group, L1 is a linker moiety and Re2 is a second reactive group, wherein Re1 reacts with an analyte to form a modified analyte; and b) contacting the sample with one or more mass labels, wherein Re2 of the bifunctional linker attached to the analyte reacts with a mass label to form a labelled analyte, wherein each mass label is relatable to an analyte by mass spectrometry.
    Type: Grant
    Filed: December 18, 2014
    Date of Patent: June 30, 2020
    Assignee: ELECTROPHORETICS LIMITED
    Inventors: Andrew Hugin Thompson, Karsten Kuhn, Gitte Böhm
  • Patent number: 10527629
    Abstract: The present invention relates to a set of two or more mass labels. Each mass label comprises: X-L-M-Re; X is a reporter moiety having exact mass; L is a bond cleavable by collision in a mass spectrometer; M is a mass modifier; Re is a) a reactive functionality for attaching the mass label to an analyte or b) the analyte. Each mass label in the set has the same integer mass; wherein the set comprises two or more subsets of mass labels, each subset comprising one or more mass labels; wherein, when the subset comprises two or more mass labels, the exact mass of the reporter moiety X of each mass label in the subset is different from the exact mass of the reporter moiety X of the mass labels in the same subset and in all other subsets; each mass label is distinguishable by mass spectrometry.
    Type: Grant
    Filed: June 12, 2015
    Date of Patent: January 7, 2020
    Assignee: ELECTROPHORETICS LIMITED
    Inventors: Andrew Hugin Thompson, Stefan Kienle, Karsten Kuhn, Nikolai Woellmer
  • Publication number: 20180362416
    Abstract: The present invention relates to a set of two or more mass labels, wherein each mass label comprises the formula: X-L-M-Re wherein X is a reporter moiety having an exact mass, L is a bond cleavable by collision in a mass spectrometer, M is a mass modifier, and Re is a) a reactive functionality for attaching the mass label to an analyte or b) the analyte, wherein each mass label in the set has an integer mass, wherein each mass label in the set has the same integer mass, and wherein the set comprises two or more subsets of mass labels, each subset comprising one, two or more mass labels, and wherein, when the subset comprises two or more mass labels, the exact mass of the reporter moiety X of each mass label in the subset is different from the exact mass of the reporter moiety X of the mass labels in the same subset and in all other subsets, and wherein each mass label is distinguishable by mass spectrometry.
    Type: Application
    Filed: December 9, 2016
    Publication date: December 20, 2018
    Applicant: ELECTROPHORETICS LIMITED
    Inventor: ANDREW HUGIN THOMPSON
  • Publication number: 20180364244
    Abstract: The present invention relates to a set of two or more mass labels, wherein each mass label comprises the formula: X-L-M-Re wherein X is a reporter moiety having an exact mass, L is a bond cleavable by collision in a mass spectrometer, M is a mass modifier, and Re is a) a reactive functionality for attaching the mass label to an analyte or b) the analyte, wherein each mass label in the set has an integer mass, wherein each mass label in the set has the same integer mass, and wherein the set comprises two or more subsets of mass labels, each subset comprising one, two or more mass labels, and wherein, when the subset comprises two or more mass labels, the exact mass of the reporter moiety X of each mass label in the subset is different from the exact mass of the reporter moiety X of the mass labels in the same subset and in all other subsets, and wherein each mass label is distinguishable by mass spectrometry.
    Type: Application
    Filed: December 9, 2016
    Publication date: December 20, 2018
    Applicant: ELECTROPHORETICS LIMITED
    Inventor: Andrew Hugin Thompson
  • Publication number: 20170146549
    Abstract: The present invention relates to a set of two or more mass labels, wherein each mass label comprises the formula: X-L-M-Re wherein X is a reporter moiety having an exact mass, L is a bond cleavable by collision in a mass spectrometer, M is a mass modifier, and Re is a) a reactive functionality for attaching the mass label to an analyte or b) the analyte, wherein each mass label in the set has an integer mass, wherein each mass label in the set has the same integer mass, and wherein the set comprises two or more subsets of mass labels, each subset comprising one, two or more mass labels, and wherein, when the subset comprises two or more mass labels, the exact mass of the reporter moiety X of each mass label in the subset is different from the exact mass of the reporter moiety X of the mass labels in the same subset and in all other subsets, and wherein each mass label is distinguishable by mass spectrometry.
    Type: Application
    Filed: June 12, 2015
    Publication date: May 25, 2017
    Applicant: Electrophoretics Limited
    Inventors: Andrew Hugin Thompson, Stefan Kienle, Karsten Kuhn, Nikolai Woellmer
  • Publication number: 20170045526
    Abstract: The present invention provides a method for labelling one or more analytes in a sample, the method comprising: a) contacting the sample with one or more bifunctional linker reagents having the general formula Re1-L1-Re2, wherein Re1 is a first reactive group, L1 is a linker moiety and Re2 is a second reactive group, wherein Re1 reacts with an analyte to form a modified analyte; and b) contacting the sample with one or more mass labels, wherein Re2 of the bifunctional linker attached to the analyte reacts with a mass label to form a labelled analyte, wherein each mass label is relatable to an analyte by mass spectrometry.
    Type: Application
    Filed: December 18, 2014
    Publication date: February 16, 2017
    Inventors: Andrew Hugin Thompson, Karsten Kuhn, Gitte Bohm
  • Publication number: 20160139140
    Abstract: The present invention provides set of two or more mass labels, wherein each mass label in the set has the same integer mass as every other label in the set, and each mass label in the set has an exact mass which is different to the mass of all other mass labels in the set such that all the mass labels in the set are distinguishable from each other by mass spectrometry.
    Type: Application
    Filed: May 15, 2014
    Publication date: May 19, 2016
    Applicant: Electrophoretics Limited
    Inventors: Andrew Hugin Thompson, Christopher Lössner, Karsten Kuhn
  • Patent number: 7825069
    Abstract: Provided herein are sets of mass labels. Each mass label in a set includes: 1) a mass marker moiety; 2) a mass normalization moiety; and 3) a cleavable linker connecting the mass marker moiety to the mass normalization moiety. Each mass marker moiety is characterized as having a mass different from that of all other mass marker moieties in the set as determined by mass spectrometry. Further, each mass normalization moiety ensures that each mass label in the set has substantially the same mass as determined by mass spectrometry.
    Type: Grant
    Filed: August 20, 2007
    Date of Patent: November 2, 2010
    Assignee: Electrophoretics Limited
    Inventors: Gunter Schmidt, Andrew Hugin Thompson, Robert Alexander Walker Johnstone
  • Patent number: 7816304
    Abstract: Provided herein are sets of mass labels. Each mass label in a set includes: 1) a mass marker moiety; 2) a mass normalisation moiety; and 3) a cleavable linker connecting the mass marker moiety to the mass normalisation moiety. Each mass marker moiety is characterized as having a mass different from that of all other mass marker moieties in the set as determined by mass spectrometry. Further, each mass normalization moiety ensures that each mass label in the set has substantially the same mass as determined by mass spectrometry.
    Type: Grant
    Filed: August 20, 2007
    Date of Patent: October 19, 2010
    Assignee: Electrophoretics Limited
    Inventors: Gunter Schmidt, Andrew Hugin Thompson, Robert Alexander Walker Johnstone
  • Patent number: 7732378
    Abstract: Provided is a set of two or more mass labels, each label in the set comprising a mass marker moiety attached via a cleavable linker having at least one amide bond to a mass normalization moiety, wherein the aggregate mass of each label in the set may be the same or different and the mass of the mass marker moiety of each label in the set may be the same or different, and wherein in any group of labels within the set having a mass marker moiety of a common mass each label has an aggregate mass different from all other labels in that group, and wherein in any group of labels within the set having a common aggregate mass each label has a mass marker moiety having a mass different from that of all other mass marker moieties in that group, such that all of the mass labels in the set are distinguishable from each other by mass spectrometry, and wherein the mass marker moiety comprises an amino acid and the mass normalization moiety comprises an amino acid.
    Type: Grant
    Filed: September 16, 2002
    Date of Patent: June 8, 2010
    Assignee: Electrophoretics Limited
    Inventors: Andrew Hugin Thompson, Christian Hamon, Jurgen Schafer, Karsten Kuhn, Joseph Schwarz, Thomas Neumann
  • Publication number: 20080167197
    Abstract: Provided herein are sets of mass labels. Each mass label in a set includes: 1) a mass marker moiety; 2) a mass normalisation moiety; and 3) a cleavable linker connecting the mass marker moiety to the mass normalisation moiety. Each mass marker moiety is characterized as having a mass different from that of all other mass marker moieties in the set as determined by mass spectrometry. Further, each mass normalisation moiety ensures that each mass label in the set has substantially the same mass as determined by mass spectrometry.
    Type: Application
    Filed: August 20, 2007
    Publication date: July 10, 2008
    Applicant: ELECTROPHORETICS LIMITED
    Inventors: Gunter Schmidt, Andrew Hugin Thompson, Robert Alexander Walker Johnstone
  • Publication number: 20080145850
    Abstract: Provided herein are sets of mass labels. Each mass label in a set includes: 1) a mass marker moiety; 2) a mass normalisation moiety; and 3) a cleavable linker connecting the mass marker moiety to the mass normalisation moiety. Each mass marker moiety is characterized as having a mass different from that of all other mass marker moieties in the set as determined by mass spectrometry. Further, each mass normalisation moiety ensures that each mass label in the set has substantially the same mass as determined by mass spectrometry.
    Type: Application
    Filed: August 20, 2007
    Publication date: June 19, 2008
    Inventors: Gunter Schmidt, Andrew Hugin Thompson, Robert Alexander Walker Johnstone
  • Patent number: 7294456
    Abstract: Provided herein are sets of mass labels. Each mass label in a set includes 1) a mass marker moiety; 2) a mass normalisation moiety; and 3) a cleavable linker connecting the mass marker moiety to the mass normalisation moiety. Each mass marker moiety is characterised as having a mass different from that of all other mass marker moieties in the set as determined by mass spectrometry. Further, each mass normalisation moiety ensures that each mass label in the set has substantially the same mass as determined by mass spectrometry.
    Type: Grant
    Filed: March 14, 2001
    Date of Patent: November 13, 2007
    Assignee: Electrophoretics Limited
    Inventors: Gunter Schmidt, Andrew Hugin Thompson, Robert Alexander Walker Johnstone
  • Patent number: 7094531
    Abstract: Provided is a method for sequencing DNA, which comprises: (a) obtaining a target DNA population comprising one or more single-stranded DNAs to be sequenced, each of which is present in a unique amount and bears a primer to provide a double-stranded portion of the DNA for ligation thereto; (b) contacting the DNA population with an array of hybridisation probes, each probe comprising a label cleavably attached to a known base sequence of predetermined length, the array containing all possible base sequences of that predetermined length; (c) removing all unligated probes; followed by the steps of: (d) cleaving the ligated probes to release each label; (e) recording the quantity of each label; and (f) activating the extended double-stranded portion to enable ligation thereto; wherein (g) steps (b) to (f) are repeated in a cycle for a sufficient number of times to determine the sequence of the or each single-stranded DNA by determining the sequence of release of each label.
    Type: Grant
    Filed: January 15, 1998
    Date of Patent: August 22, 2006
    Assignee: Xzillion GmbH Co.
    Inventors: Gunter Schmidt, Andrew Hugin Thompson
  • Patent number: 7056659
    Abstract: A method for characterizing DNA, which comprises: (i) providing a population of DNA fragments, each fragment having cleavably attached thereto a mass label for identifying a feature of that fragment; (ii) separating the fragments on the basis of their length; (iii) cleaving each fragment in a mass spectrometer to release its mass label; and (iv) determining each mass label by mass spectrometry to relate the feature of each fragment to the length of the fragment.
    Type: Grant
    Filed: July 13, 1998
    Date of Patent: June 6, 2006
    Assignee: Xzillion GmbH & Co.
    Inventors: Günter Schmidt, Andrew Hugin Thompson
  • Patent number: 6846679
    Abstract: Provided is a method for characterizing a polypeptide or a population of polypeptides, which method comprises: (a) contacting a sample comprising one or more polypeptides with a first cleavage agent to generate polypeptide fragments; (b) isolating one or more polypeptide fragments, each fragment comprising the N-terminus or the C-terminus of the polypeptide from which it was fragmented; (c) identifying the isolated fragments by mass spectrometry; (d) repeating steps (a)-(c) on the sample using a second cleavage agent that cleaves at a difference site from the first cleavage agent; and (e) characterizing the one or more polypeptides in the sample from the fragments identified in steps (c) and (d).
    Type: Grant
    Filed: October 1, 1999
    Date of Patent: January 25, 2005
    Assignee: Xzillion GmbH & Co., KG
    Inventors: Gunter Schmidt, Andrew Hugin Thompson
  • Patent number: 6699668
    Abstract: An array of hybridisation probes, each of which comprises a mass label linked to a known base sequence of predetermined length, wherein each mass label of the array, optionally together with the known base sequence, is relatable to that base sequence by mass spectrometry.
    Type: Grant
    Filed: November 15, 2001
    Date of Patent: March 2, 2004
    Assignee: XZillion GmbH & Co.
    Inventors: Günter Schmidt, Andrew Hugin Thompson, Robert Alexander Walker Johnstone
  • Publication number: 20040018565
    Abstract: Provided is a method for assaying a substance, which method comprises contacting the substance with an assay agent comprising a catalytic agent to associate the substance with the catalytic agent, contacting the resulting associated substance with a label precursor, and detecting a label, wherein the label precursor is capable of reacting catalytically with the catalytic agent to release the label, and wherein the label is a mass label. Also provided is a kit for assaying a substance, which kit comprises an assay agent comprising a catalytic agent, and a label precursor capable of reacting catalytically with the catalytic agent to release a label, wherein the label is a mass label.
    Type: Application
    Filed: July 16, 2003
    Publication date: January 29, 2004
    Applicant: XZILLION GMBH & CO.
    Inventors: Gunter Schmidt, Andrew Hugin Thompson