Abstract: The present invention relates to the field of data processing, and particularly to a software system and associated method for 3D image processing. The invention is to transform 3D images into space codes, and further align code-associated 3D images with known data within a target database.

Abstract: The present invention relates to methods for searching and constructing a 3D motif image database, wherein said 3D motif image database can be used to understand the connection relationship of a 3D network, e.g. a neural network comprising biological neural networks or artificial neural networks. The searching and constructing methods are applied on the 3D motif image database, a proper computer-aided graphic platform. The database not only facilitates the management of the huge amount of categorized data but also rationally excavates the hidden information cloaked within.

Abstract: A system for classifying tiny insects includes a cultivation tank, a detecting container, a detector, a gathering device, and a control unit. The cultivation tank is connected to the detecting container, so that the hatched tiny insects can enter the detecting area of the detecting container from the cultivation tank. The detector is used for detecting the characteristics of the tiny insects in the detecting area, and then the control unit controls the switching unit of the gathering device to switch the gathering containers for gathering the tiny insects according to the detecting results. The system of the present invention is capable of automatically classifying the tiny insects and then gathering them to different gathering containers according to their characteristics, so as to decrease the man power and time necessary for factitious classification.

Abstract: A method of generating standard brain model from a bio-expression system includes performing steps of registration to input standard surface and individual surface into affine registration; recording a transformation parameters from the affine registration; performing steps of inputting a individual neuropil and transform parameters into an affine transformation; applying the data of the affine transformation to transform individual neuropil to achieve transformed individual neuropil; and performing a step of affine registration to register a standard neuropil to the transformed individual neuropil to achieve a resulting transformation, wherein the resulting transformation can be output as a position and orientation of standard neuropil within the standard surface.

Abstract: A method of enhancing 3D image information density, comprising providing a confocal fluorescent microscope and a rotational stage. 3D image samples at different angles are collected. A deconvolution process of the 3D image samples by a processing unit is performed. A registration process of the deconvoluted 3D image samples by the processing unit is performed. An interpolation process of the registered 3D image samples by the processing unit is performed to output a 3D image in high resolution.

Abstract: The present invention relates to a neuronal database system for providing neurotransmitter-related information, comprising: a database of three-dimensional morphological information of neuron with the associated neurotransmitters and a user interface for end user to access information by peripheral computer devices, such as key board or mouse.

Abstract: The present invention discloses a method of visualizing the 3-dimensional microstructure of a thick biological tissue. This method includes: a process of immersing thick, opaque biological tissues in the optical-clearing solution, for example FocusClear (U.S. Pat. No. 6,472,216), and utilizing an optical scanning microscope and a cutter. In microscopy, the cutter removes a portion of the tissue after each round of optical scanning. Each round of optical scanning follows the principal that the depth of the removal plane is less than the depth of the boundary plane derived from the scanning This method acquires an image stack to provide the information of thick biological tissue's 3-dimensional microstructure with minimal interference by the tissue removal.

Abstract: The present invention discloses an image preprocessing system, which includes a processing unit; an image preprocessing unit coupled to the processing unit to preprocess image slice data, wherein the image preprocessing unit includes an image fusion module to estimate missing values between different image slice data and an image stitching module to stitch different image slice data into stitched image data; and a database coupled to the processing unit to store the preprocessed image slice data.

Abstract: The present invention relates to the field of data processing, and particularly to a software system and associated method for 3D image processing. The invention is to transform 3D images into space codes, and further align code-associated 3D images with known data within a target database.

Abstract: The present invention provides a method for providing 3D stereo image. The method comprises: accepting a request submitted from a client system by an intermediate server system; selecting an image server based on the request and responding to the client system from the image server through a processor in the intermediate server system; requesting at least one 3D stereo image by the client system from the image server according to the response; and providing the at least one 3D stereo image to the client system by the image server system. The present invention also provides a system for providing 3D stereo image.

Abstract: The present invention discloses an image processing method for feature retention associated with averaging processes. The image processing method comprises: scaling and aligning a plurality of image data for acquiring feature information; determining a plurality of two-dimensional feature label points according to the feature information for generating at least one Bezier curve; utilizing the at least one Bezier curve to generate at least one Bezier tube and performing Bezier tube fitting for generating result of Bezier tube fitting; deforming the plurality of image data according to the Bezier tube or the result of Bezier tube fitting for generating a plurality of deformed image data; and averaging the plurality of deformed image data for generating feature-preserved average image data. The present invention also provides an image processing system, a computer readable storage medium, and a computer program product, for implementing the image processing method.

Abstract: The present invention discloses an image preprocessing system, which includes a processing unit; an image preprocessing unit coupled to the processing unit to preprocess image slice data, wherein the image preprocessing unit includes an image fusion module to estimate missing values between different image slice data and an image stitching module to stitch different image slice data into stitched image data; and a database coupled to the processing unit to store the preprocessed image slice data.

Abstract: The present invention relates to methods for searching and constructing a 3D motif image database, wherein said 3D motif image database can be used to understand the connection relationship of a 3D network, e.g. a neural network comprising biological neural networks or artificial neural networks. The searching and constructing methods are applied on the 3D motif image database, a proper computer-aided graphic platform. The database not only facilitates the management of the huge amount of categorized data but also rationally excavates the hidden information cloaked within.

Abstract: A microscopy system includes an image focusing module, a stage for supporting a sample, image collection unit for collecting sliced images of the sample acquired by the image focusing module, and an image fusion unit for fusing sliced images of the sample acquired from different observation angles. The stage supports the sample and is configured to be revolvable around a rotational axis which is substantially perpendicular to an extending direction from the sample to the image focusing module so that enabling the image focusing module to acquire sliced images of the sample from different observation angles. The image fusion unit is used for remapping the sliced images acquired from different observation angles into a reference coordinate system, converting anisotropic voxels resolution of the sliced images to isotropic resolution, and fusing the sliced images into a final image.

Abstract: The bio-expression system comprising: a process system used to process data and a three-dimension image generating module embedded in the computing system, wherein while input of a set of two-dimensional individual model sections is fed into the process system, the three-dimension image generating module is responsive to the input of the two-dimension individual model sections and is capable of processing an individual model construction and model-averaging procedure, thereby generating an average model for each individual dataset. A database includes a bio-expression sub-database, cellular network sub-database and fine structure sub-database, wherein the database is coupled to the process system to store at least the average model. A stereoscopic projecting system is coupled to the process system to display stereoscopic images for active or passive virtual reality applications, thereby presenting the bio-expressions, cellular networks or bio-fine structures under the input instruction of the process system.

Abstract: The present invention discloses a transgenic Drosophila line with genes of first fluorescent proteins and genes of second fluorescent proteins, wherein the genes of first fluorescent proteins are utilized to identify a predetermined area of tissues or a predetermined number of cells in the transgenic Drosophila line with a first exciting light source, and the genes of second fluorescent proteins are utilized to identify specific cells or neurons within the predetermined area of tissues or among the predetermined number of cells by illumination with a second exciting light source.

Abstract: A sample carrying apparatus capable of revolving a sample includes a body and a revolvable structure. The body has a slot. The revolvable structure partially accommodated within the slot is pivotally connected to the body and is revolvable relative to the body.

Abstract: A microscopy system includes an objective lens and a stage for holding a sample. The objective lens focuses incident light coming from one side of the objective lens to the sample disposed on the other side of the objective lens, and focuses an optical signal emitted from the sample to a photosensor disposed on the one side of the objective lens. The stage supports the sample and is configured to be revolvable about an axis, which is substantially perpendicular to an extending direction from the sample to the objective lens.

Abstract: A method of generating standard brain model from a bio-expression system includes performing steps of registration to input standard surface and individual surface into affine registration; recording a transformation parameters from the affine registration; performing steps of inputting a individual neuropil and transform parameters into an affine transformation; applying the data of the affine transformation to transform individual neuropil to achieve transformed individual neuropil; and performing a step of affine registration to register a standard neuropil to the transformed individual neuropil to achieve a resulting transformation, wherein the resulting transformation can be output as a position and orientation of standard neuropil within the standard surface.

Abstract: The present invention discloses a method for labeling specific cells within living cells or tissues. The method comprises preparing the vectors with genes of photoactivable fluorescent proteins, followed by injecting the vectors containing genes of photoactivable fluorescent proteins together with genes of other fluorescent proteins into living cells or tissues, resulting in biological tissues with traceable systemic expression and irradiating the predetermined areas in living cells or tissues with an activating light source, thereby enhancing the intensity and duration of the emitted fluorescent after other excitations, thus revealing the targets intended for observation out of the background, so that a target-oriented image tracing is achieved.