Patents by Inventor Anthony James Cox
Anthony James Cox has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Publication number: 20250084064Abstract: Novel compounds of the structural formula (I), and the pharmaceutically acceptable salts thereof, are inhibitors of Nav1.8 channel activity and may be useful in the treatment, prevention, management, amelioration, control and suppression of diseases mediated by Nav1.8 channel activity. The compounds of the present invention may be useful in the treatment, prevention or management of pain disorders, cough disorders, acute itch disorders, and chronic itch disorders.Type: ApplicationFiled: November 26, 2024Publication date: March 13, 2025Applicant: Merck Sharp & Dohme LLCInventors: Ashok Arasappan, Ian M. Bell, Michael J. Breslin, Christopher James Bungard, Christopher S. Burgey, Harry R. Chobanian, Jason M. Cox, Anthony T. Ginnetti, Deodial Guy Guiadeen, Kristen L.G. Jones, Mark E. Layton, Hong Liu, Jian Liu, James J. Perkins, Shawn J. Stachel, Linda M. Suen-Lai, Zhe Wu
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Patent number: 12223651Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: GrantFiled: April 19, 2023Date of Patent: February 11, 2025Assignee: Illumina, Inc.Inventors: Francisco Jose Garcia, Klaus Maisinger, Stephen Tanner, John A. Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Patent number: 12217832Abstract: The technology disclosed directly operates on sequencing data and derives its own feature filters. It processes a plurality of aligned reads that span a target base position. It combines elegant encoding of the reads with a lightweight analysis to produce good recall and precision using lightweight hardware. For instance, one million training examples of target base variant sites with 50 to 100 reads each can be trained on a single GPU card in less than 10 hours with good recall and precision. A single GPU card is desirable because it a computer with a single GPU is inexpensive, almost universally within reach for users looking at genetic data. It is readily available on could-based platforms.Type: GrantFiled: May 9, 2023Date of Patent: February 4, 2025Assignees: Illumina, Inc., Illumina Cambridge LimitedInventors: Ole Schulz-Trieglaff, Anthony James Cox, Kai-How Farh
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Publication number: 20230386611Abstract: The technology disclosed directly operates on sequencing data and derives its own feature filters. It processes a plurality of aligned reads that span a target base position. It combines elegant encoding of the reads with a lightweight analysis to produce good recall and precision using lightweight hardware. For instance, one million training examples of target base variant sites with 50 to 100 reads each can be trained on a single GPU card in less than 10 hours with good recall and precision. A single GPU card is desirable because it a computer with a single GPU is inexpensive, almost universally within reach for users looking at genetic data. It is readily available on could-based platforms.Type: ApplicationFiled: May 9, 2023Publication date: November 30, 2023Inventors: Ole SCHULZ-TRIEGLAFF, Anthony James COX, Kai-How FARH
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Publication number: 20230351598Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: ApplicationFiled: April 19, 2023Publication date: November 2, 2023Inventors: Francisco Jose Garcia, Klaus Maisinger, Stephen Tanner, John A. Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Patent number: 11705219Abstract: The technology disclosed directly operates on sequencing data and derives its own feature filters. It processes a plurality of aligned reads that span a target base position. It combines elegant encoding of the reads with a lightweight analysis to produce good recall and precision using lightweight hardware. For instance, one million training examples of target base variant sites with 50 to 100 reads each can be trained on a single GPU card in less than 10 hours with good recall and precision. A single GPU card is desirable because it a computer with a single GPU is inexpensive, almost universally within reach for users looking at genetic data. It is readily available on could-based platforms.Type: GrantFiled: January 14, 2019Date of Patent: July 18, 2023Assignees: Illumina, Inc., Illumina Cambridge LimitedInventors: Ole Schulz-Trieglaff, Anthony James Cox, Kai-How Farh
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Patent number: 11676275Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: GrantFiled: August 26, 2021Date of Patent: June 13, 2023Assignee: Illumina, Inc.Inventors: Francisco Jose Garcia, Klaus Maisinger, Stephen Tanner, John A. Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Patent number: 11605165Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: GrantFiled: January 25, 2021Date of Patent: March 14, 2023Assignee: Illumina, Inc.Inventors: Francisco Garcia, Klaus Maisinger, Stephen Tanner, John Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Publication number: 20220051407Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: ApplicationFiled: August 26, 2021Publication date: February 17, 2022Inventors: Francisco Jose Garcia, Klaus Maisinger, Stephen Tanner, John A. Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Publication number: 20210150715Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: ApplicationFiled: January 25, 2021Publication date: May 20, 2021Inventors: Francisco Garcia, Klaus Maisinger, Stephen Tanner, John Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Publication number: 20200074630Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: ApplicationFiled: April 9, 2019Publication date: March 5, 2020Inventors: Francisco Garcia, Klaus Maisinger, Stephen Tanner, John Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Publication number: 20190220704Abstract: The technology disclosed directly operates on sequencing data and derives its own feature filters. It processes a plurality of aligned reads that span a target base position. It combines elegant encoding of the reads with a lightweight analysis to produce good recall and precision using lightweight hardware. For instance, one million training examples of target base variant sites with 50 to 100 reads each can be trained on a single GPU card in less than 10 hours with good recall and precision. A single GPU card is desirable because it a computer with a single GPU is inexpensive, almost universally within reach for users looking at genetic data. It is readily available on could-based platforms.Type: ApplicationFiled: January 14, 2019Publication date: July 18, 2019Applicants: Illumina, Inc., Illumina Cambridge LimitedInventors: Ole Benjamin SCHULZ-TRIEGLAFF, Anthony James COX, Kai-How FARH
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Patent number: 10304189Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: GrantFiled: November 17, 2016Date of Patent: May 28, 2019Assignee: Illumina, Inc.Inventors: Francisco Garcia, Klaus Maisinger, Stephen Tanner, John Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Patent number: 9929746Abstract: The present disclosure provides computer implemented methods and systems for analyzing datasets, such as large data sets output from nucleic acid sequencing technologies. In particular, the present disclosure provides for data analysis comprising computing the BWT of a collection of strings in an incremental, character by character, manner. The present disclosure also provides compression boosting strategies resulting in a BWT of a reordered collection of data that is more compressible by second stage compression methods compared to non-reordered computational analysis.Type: GrantFiled: August 5, 2015Date of Patent: March 27, 2018Assignee: Illumina Cambridge LimitedInventors: Anthony James Cox, Lilian Janin
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Publication number: 20170237445Abstract: The present disclosure provides computer implemented methods and systems for analysing datasets, such as large data sets output from nucleic acid sequencing technologies. In particular, the present disclosure provides for data analysis comprising computing the BWT of a collection of strings in an incremental, character by character, manner. The present disclosure also provides compression boosting strategies resulting in a BWT of a reordered collection of data that is more compressible by second stage compression methods compared to non-reordered computational analysis.Type: ApplicationFiled: August 5, 2015Publication date: August 17, 2017Inventors: Anthony James Cox, Lilian Janin
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Publication number: 20170161900Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: ApplicationFiled: November 17, 2016Publication date: June 8, 2017Inventors: Francisco Garcia, Klaus Maisinger, Stephen Tanner, John Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Patent number: 9530207Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: GrantFiled: January 29, 2015Date of Patent: December 27, 2016Assignee: Illumina, Inc.Inventors: Francisco Garcia, Klaus Maisinger, Stephen Tanner, John Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Publication number: 20150243028Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: ApplicationFiled: January 29, 2015Publication date: August 27, 2015Inventors: Francisco Garcia, Klaus Maisinger, Stephen Tanner, John Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Patent number: 8965076Abstract: Methods and systems for analysis of image data generated from various reference points. Particularly, the methods and systems provided are useful for real time analysis of image and sequence data generated during DNA sequencing methodologies.Type: GrantFiled: January 13, 2011Date of Patent: February 24, 2015Assignee: Illumina, Inc.Inventors: Francisco Garcia, Klaus Maisinger, Stephen Tanner, John Moon, Tobias Mann, Michael Lawrence Parkinson, Anthony James Cox, Haifang H. Ge
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Patent number: 8798936Abstract: The present disclosure provides computer implemented methods and systems for analyzing datasets, such as large data sets output from nucleic acid sequencing technologies. In particular, the present disclosure provides for data analysis comprising computing the BWT of a collection of strings in an incremental, character by character, manner. The present disclosure also provides compression boosting strategies resulting in a BWT of a reordered collection of data that is more compressible by second stage compression methods compared to non-reordered computational analysis.Type: GrantFiled: April 30, 2012Date of Patent: August 5, 2014Assignee: Illumina, Inc.Inventors: Markus J. Bauer, Anthony James Cox, Giovanna Rosone, Dirk Evers