Abstract: A method of operating an instrument that is a macroscope, microscope, or slide scanner is provided where the instrument has a larger dynamic range for measurement than a dynamic range required in the final image of a specimen. In the method, data is measured from a specimen using the instrument, and the dynamic range of the measured data is contracted in the final image file during scanning.

Abstract: A method of operating an instrument that is a macroscope, microscope, or slide scanner is provided where the instrument has a larger dynamic range for measurement than a dynamic range required in the final image of a specimen. In the method, data is measured from a specimen using the instrument, and the dynamic range of the measured data is contracted in the final image file during scanning.

Abstract: A new high resolution confocal and non-confocal scanning laser macroscope is disclosed which achieves fine focus and control of focus position by moving a lens in the intermediate optics. This arrangement is particularly useful for imaging specimens where it is difficult to focus by changing the distance between the scan lens and the specimen, for example for in-vivo imaging, photodynamic therapy, and image-guided surgery. It is also important to keep the lens-to-specimen distance constant when a liquid-immersion scan lens is used, in order to maintain a constant thickness of liquid between the lens and the specimen. In addition to being useful for confocal slicing, motion of the intermediate lens under computer control also enables dynamic focus and the ability to move the focal spot along a general path inside the specimen. Several applications of the imaging system are described.

Abstract: A new high resolution confocal and non-confocal scanning laser macroscope is disclosed which images macroscopic specimens in reflected light, transmitted light, fluorescence, photoluminescence and multi-photon fluorescence. The optical arrangement of a scanning laser macroscope has been altered to include a liquid-immersion laser scan lens, providing higher numerical aperture and higher resolution; and higher intensity at the focal spot, which makes the macroscope particularly well suited for multiphoton imaging. Several applications of the imaging system are described. A liquid-immersion laser scan lens with spring-loaded bottom element and method for containing the immersion liquid are also disclosed.

Abstract: A non-confocal scanning beam optical imaging or mapping system for macroscopic samples is disclosed, in which an expanded laser beam passes through a scan system and a telecentric laser scan lens focuses the beam to a moving spot in the sample. Light reflected (or emitted) from the illuminated spot is collected by the laser scan lens, descanned by the scan system, and detected by a detector. Transmitted-light and other non-confocal versions are also disclosed. This new scanning beam laser imaging system performs a rapid scan of a large sample. Applications include fluorescent imaging of large biomedical specimens, including fluorescent gels, photoluminescence mapping of semiconductor samples, etc.

Abstract: A new real-time confocal scanning laser macroscope is disclosed which images macroscopic specimens in reflected light and fluorescence or photoluminescence. The optical arrangement of a Nipkow disk microscope has been altered to include a telecentric scan lens which enables a large area of a specimen to be imaged with micron resolution, and when interchanged with a microscope objective, allows a small area of the specimen to be imaged with submicron resolution.

Abstract: A new confocal scanning beam laser microscope or imaging system is disclosed which has a very wide range of magnification, which allows a small area of a specimen to be imaged at submicron resolution at high magnification, and a large area of the specimen, up to several centimeters in size, at lower resolution. The optical arrangement of a confocal scanning beam laser microscope is used to produce high resolution images of a small area of the specimen, using a microscope objective that is not telecentric. A telecentric laser scan lens is interchanged with the optical subassembly of the microscope comprised of the microscope objective and unitary telescope above it, such that the scanning beam now passes through the telecentric laser scan lens to produce lower resolution images of a much larger area of the specimen, and the imaging system acts as a confocal scanning beam macroscope.

Abstract: A motion system or goniometer for moving a sample supported by the system has a triangular plate supported at each apex by actuators that can extend or retract axially independently from one another. The actuators are mounted on x-y translation stages and a .theta. rotation stage. The movement of the actuators, translation stages and rotation stage is controlled by a computer. When it is desired to create a rocking curve at a particular position on the sample, the translation stages and rotation stage can remain stationary while moving only the plate and actuators. The goniometer is much more efficient and less expensive than previous devices which require movement of the entire goniometer when creating a rocking curve.

Abstract: A new scanning optical microscope or mapping system for transmission, reflection and luminescence imaging is disclosed. A transmission arm collects light transmitted through the specimen and injects it back into the optical path of the microscope parallel with and coaxial with the reflected light beam returning from the specimen, so both transmitted and reflected light beams are descanned by the same scan optics on their way back to the same detector. Since light travels around the transmission arm in both directions, this microscope forms images of the specimen from either the top or the bottom and in either reflected light or transmitted light, and all four of these imaging modes can be selected separately. Embodiments for use in fluorescence and photoluminescence imaging are also disclosed.

Abstract: A scanning optical imaging or mapping system for macroscopic specimens is disclosed, which allows both confocal and non-confocal imaging to be performed in reflected light, photoluminescence, fluorescence and other contrast mechanisms. Several embodiments are disclosed, for use in photoluminescence mapping of semiconductor specimens, fluorescence scanning of gels used in gene sequencing, fingerprint detection, and other application areas.

Abstract: A scanning optical microscope or mapping system for spectrally-resolved measurement of light reflected, emitted or scatttered from a specimen is disclosed, in which the spectrally-resolving element is integrated into the detection arm of the microscope or mapping system to result in good photon collection efficiency as well as good spectral and spatial resolution. A confocal version of the microscope is disclosed which will be of particular interest in fluorescence microscopy, and the non-confocal mapping system will be of particular interest in photoluminescence mapping of semiconductor wafers.