Patents by Inventor Arun Manickam

Arun Manickam has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11833503
    Abstract: The present disclosure provides methods and compositions for surface functionalization of solid substrates. The compositions include functionalized silanes and nucleic acid constructs which may react to immobilize the nucleic acid constructs on the surface on the solid substrate. The disclosure also provides methods for immobilization of silanes and nucleic acid constructs on the surface of the substrate.
    Type: Grant
    Filed: December 7, 2021
    Date of Patent: December 5, 2023
    Assignee: InSilixa, Inc.
    Inventors: Andrea Cuppoletti, Arjang Hassibi, Lei Pei, Yang Liu, Kshama Jirage, Arun Manickam
  • Publication number: 20230333039
    Abstract: A method and device for performing DNA sequencing and extracting structural information from unknown nucleic acid strands. The device includes a microwell structure, where identical DNA strands are immobilized within the microwell structure on a surface of a micro-bead, an active electrode or a porous polymer. The device further includes a CMOS-integrated semiconductor integrated circuit, where the CMOS-integrated semiconductor integrated circuit includes metal layers on a silicon substrate, where the metal layers form an active electrode biosensor. In addition, a sensing electrode is formed by creating openings in a passivation layer of the CMOS-integrated semiconductor integrated circuit to hold a single bead, on which the DNA strands are immobilized.
    Type: Application
    Filed: July 29, 2022
    Publication date: October 19, 2023
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh
  • Publication number: 20230173483
    Abstract: The present disclosure provides methods and compositions for surface functionalization of solid substrates. The compositions include functionalized silanes and nucleic acid constructs which may react to immobilize the nucleic acid constructs on the surface on the solid substrate. The disclosure also provides methods for immobilization of silanes and nucleic acid constructs on the surface of the substrate.
    Type: Application
    Filed: December 7, 2021
    Publication date: June 8, 2023
    Inventors: Andrea Cuppoletti, Arjang Hassibi, Lei Pei, Yang Liu, Kshama Jirage, Arun Manickam
  • Publication number: 20230141046
    Abstract: A biosensor pixel for measuring current that flows through the electrode surface in response to electrochemical interactions and a biosensor array architecture that includes such biosensor pixels. The biosensor pixel includes an electrode transducer configured to measure a current generated by electrochemical interactions occurring at a recognition layer placed directly on top of it in response to an electrical voltage placed across an electrode transducer-electrolyte interface. The biosensor pixel further includes a trans-impedance amplifier connected to the electrode transducer, where the trans-impedance amplifier is configured to convert the current into a voltage signal as the electrochemical interactions occur.
    Type: Application
    Filed: January 11, 2023
    Publication date: May 11, 2023
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh
  • Patent number: 11579111
    Abstract: A biosensor pixel for measuring current that flows through the electrode surface in response to electrochemical interactions and a biosensor array architecture that includes such biosensor pixels. The biosensor pixel includes an electrode transducer configured to measure a current generated by electrochemical interactions occurring at a recognition layer placed directly on top of it in response to an electrical voltage placed across an electrode transducer-electrolyte interface. The biosensor pixel further includes a trans-impedance amplifier connected to the electrode transducer, where the trans-impedance amplifier is configured to convert the current into a voltage signal as the electrochemical interactions occur.
    Type: Grant
    Filed: April 24, 2018
    Date of Patent: February 14, 2023
    Assignee: Board of Regents, The University of Texas System
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh
  • Publication number: 20220373495
    Abstract: A method and device for performing DNA sequencing and extracting structural information from unknown nucleic acid strands. The device includes a microwell structure, where identical DNA strands are immobilized within the microwell structure on a surface of a micro-bead, an active electrode or a porous polymer. The device further includes a CMOS-integrated semiconductor integrated circuit, where the CMOS-integrated semiconductor integrated circuit includes metal layers on a silicon substrate, where the metal layers form an active electrode biosensor. In addition, a sensing electrode is formed by creating openings in a passivation layer of the CMOS-integrated semiconductor integrated circuit to hold a single bead, on which the DNA strands are immobilized.
    Type: Application
    Filed: December 21, 2021
    Publication date: November 24, 2022
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh
  • Publication number: 20220282320
    Abstract: The present disclosure provides methods, devices and systems that enable simultaneous multiplexing amplification reaction and real-time detection in a single reaction chamber.
    Type: Application
    Filed: November 19, 2021
    Publication date: September 8, 2022
    Inventors: Arjang Hassibi, Robert G. Kuimelis, Lei Pei, Kirsten A. Johnson, Jessica C. Ebert, Arun Manickam, Tran T. Van
  • Patent number: 11360029
    Abstract: The present disclosure provides methods, apparatus and systems for time-gated fluorescent-based detection. Time-based fluorescence analysis can be used in certain biochemical assays by measuring the emitted photon flux from fluorophores after an individual excitation pulse.
    Type: Grant
    Filed: April 6, 2020
    Date of Patent: June 14, 2022
    Assignee: INSILIXA, INC.
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh, Robert G. Kuimelis
  • Publication number: 20220099613
    Abstract: A method and device for performing DNA sequencing and extracting structural information from unknown nucleic acid strands. The device includes a microwell structure, where identical DNA strands are immobilized within the microwell structure on a surface of a micro-bead, an active electrode or a porous polymer. The device further includes a CMOS-integrated semiconductor integrated circuit, where the CMOS-integrated semiconductor integrated circuit includes metal layers on a silicon substrate, where the metal layers form an active electrode biosensor. In addition, a sensing electrode is formed by creating openings in a passivation layer of the CMOS-integrated semiconductor integrated circuit to hold a single bead, on which the DNA strands are immobilized.
    Type: Application
    Filed: February 9, 2021
    Publication date: March 31, 2022
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh
  • Publication number: 20210156813
    Abstract: A method and device for performing DNA sequencing and extracting structural information from unknown nucleic acid strands. The device includes a microwell structure, where identical DNA strands are immobilized within the microwell structure on a surface of a micro-bead, an active electrode or a porous polymer. The device further includes a CMOS-integrated semiconductor integrated circuit, where the CMOS-integrated semiconductor integrated circuit includes metal layers on a silicon substrate, where the metal layers form an active electrode biosensor. In addition, a sensing electrode is formed by creating openings in a passivation layer of the CMOS-integrated semiconductor integrated circuit to hold a single bead, on which the DNA strands are immobilized.
    Type: Application
    Filed: June 29, 2020
    Publication date: May 27, 2021
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh
  • Publication number: 20200292457
    Abstract: The present disclosure provides methods, apparatus and systems for time-gated fluorescent-based detection. Time-based fluorescence analysis can be used in certain biochemical assays by measuring the emitted photon flux from fluorophores after an individual excitation pulse.
    Type: Application
    Filed: April 6, 2020
    Publication date: September 17, 2020
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh, Robert G. Kuimelis
  • Patent number: 10739293
    Abstract: A method and device for performing DNA sequencing and extracting structural information from unknown nucleic acid strands. The device includes a microwell structure, where identical DNA strands are immobilized within the microwell structure on a surface of a micro-bead, an active electrode or a porous polymer. The device further includes a CMOS-integrated semiconductor integrated circuit, where the CMOS-integrated semiconductor integrated circuit includes metal layers on a silicon substrate, where the metal layers form an active electrode biosensor. In addition, a sensing electrode is formed by creating openings in a passivation layer of the CMOS-integrated semiconductor integrated circuit to hold a single bead, on which the DNA strands are immobilized.
    Type: Grant
    Filed: April 12, 2016
    Date of Patent: August 11, 2020
    Assignee: Board of Regents, The University of Texas Systems
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh
  • Patent number: 10501778
    Abstract: The present disclosure provides methods and devices for simultaneous identification of a plurality of target nucleic acid sequences in a single sample chamber that includes an addressable array of nucleic acid probes attached to a solid surface. Addressable signals can be generated and measured, in real-time, upon hybridization of target sequences at the individual probe locations within the array while the temperature of the system is varied. Such generated signals, as a function temperature, can then be used to compute the properties of nucleic acid hybridization at each addressable location which is ultimately utilized to estimate the sequence of the target nucleic acids. In particular, an integrated semiconductor biosensor array device can be used to measure the addressable signals.
    Type: Grant
    Filed: June 13, 2017
    Date of Patent: December 10, 2019
    Assignee: INSILIXA, INC.
    Inventors: Arjang Hassibi, Kshama Jirage, Arun Manickam, Kaveh Milaninia
  • Patent number: 10174367
    Abstract: The present disclosure provides methods, devices and systems that enable simultaneous multiplexing amplification reaction and real-time detection in a single reaction chamber.
    Type: Grant
    Filed: October 12, 2016
    Date of Patent: January 8, 2019
    Assignee: INSILIXA, INC.
    Inventors: Arjang Hassibi, Kshama Jirage, Arun Manickam, Rituraj Singh
  • Publication number: 20180335399
    Abstract: A biosensor pixel for measuring current that flows through the electrode surface in response to electrochemical interactions and a biosensor array architecture that includes such biosensor pixels. The biosensor pixel includes an electrode transducer configured to measure a current generated by electrochemical interactions occurring at a recognition layer placed directly on top of it in response to an electrical voltage placed across an electrode transducer-electrolyte interface. The biosensor pixel further includes a trans-impedance amplifier connected to the electrode transducer, where the trans-impedance amplifier is configured to convert the current into a voltage signal as the electrochemical interactions occur.
    Type: Application
    Filed: April 24, 2018
    Publication date: November 22, 2018
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh
  • Patent number: 9983163
    Abstract: A biosensor pixel for measuring current that flows through the electrode surface in response to electrochemical interactions and a biosensor array architecture that includes such biosensor pixels. The biosensor pixel includes an electrode transducer configured to measure a current generated by electrochemical interactions occurring at a recognition layer placed directly on top of it in response to an electrical voltage placed across an electrode transducer-electrolyte interface. The biosensor pixel further includes a trans-impedance amplifier connected to the electrode transducer, where the trans-impedance amplifier is configured to convert the current into a voltage signal as the electrochemical interactions occur.
    Type: Grant
    Filed: April 30, 2013
    Date of Patent: May 29, 2018
    Assignee: Board of Regents, The University of Texas System
    Inventors: Arjang Hassibi, Arun Manickam, Rituraj Singh
  • Publication number: 20180023129
    Abstract: The present disclosure provides methods and devices for simultaneous identification of a plurality of target nucleic acid sequences in a single sample chamber that includes an addressable array of nucleic acid probes attached to a solid surface. Addressable signals can be generated and measured, in real-time, upon hybridization of target sequences at the individual probe locations within the array while the temperature of the system is varied. Such generated signals, as a function temperature, can then be used to compute the properties of nucleic acid hybridization at each addressable location which is ultimately utilized to estimate the sequence of the target nucleic acids. In particular, an integrated semiconductor biosensor array device can be used to measure the addressable signals.
    Type: Application
    Filed: June 13, 2017
    Publication date: January 25, 2018
    Inventors: Arjang HASSIBI, Kshama JIRAGE, Arun MANICKAM, Kaveh MILANINIA
  • Patent number: 9708647
    Abstract: The present disclosure provides methods and devices for simultaneous identification of a plurality of target nucleic acid sequences in a single sample chamber that includes an addressable array of nucleic acid probes attached to a solid surface. Addressable signals can be generated and measured, in real-time, upon hybridization of target sequences at the individual probe locations within the array while the temperature of the system is varied. Such generated signals, as a function temperature, can then be used to compute the properties of nucleic acid hybridization at each addressable location which is ultimately utilized to estimate the sequence of the target nucleic acids. In particular, an integrated semiconductor biosensor array device can be used to measure the addressable signals.
    Type: Grant
    Filed: March 23, 2015
    Date of Patent: July 18, 2017
    Assignee: Insilixa, Inc.
    Inventors: Arjang Hassibi, Kshama Jirage, Arun Manickam, Kaveh Milaninia
  • Publication number: 20170101666
    Abstract: The present disclosure provides methods, devices and systems that enable simultaneous multiplexing amplification reaction and real-time detection in a single reaction chamber.
    Type: Application
    Filed: October 12, 2016
    Publication date: April 13, 2017
    Inventors: Arjang HASSIBI, Kshama JIRAGE, Arun MANICKAM, Rituraj SINGH
  • Patent number: 9499861
    Abstract: The present disclosure provides methods, devices and systems that enable simultaneous multiplexing amplification reaction and real-time detection in a single reaction chamber.
    Type: Grant
    Filed: September 10, 2015
    Date of Patent: November 22, 2016
    Assignee: InSilixa, Inc.
    Inventors: Arjang Hassibi, Kshama Jirage, Arun Manickam, Rituraj Singh