Abstract: In one example aspect, a method obtains a file system of a virtual machine. The virtual machine comprises a plurality of applications. The plurality of applications are started through an initialization system when the virtual machine is initialized. The method captures a set of contents of the file system of the virtual machine. The method captures a metadata of the file system of the virtual machine. The method captures a state of file system of virtual machine. The method converts the plurality of applications deployed in the virtual machine into a set of containers by creating a separate container image for each application of the plurality of applications deployed in the virtual machine. Each container comprises an application packaging medium and is built based on a container specification. The container specification is derived from the set of contents of the file system of the virtual machine, metadata of the file system of the virtual machine, and the state of file system of virtual machine.

Abstract: Systems, methods and articles of manufacture are disclosed for searching chemical compounds referenced in chemical literature. References to chemical compounds in the documents may be transformed to corresponding references using a standard notation for representing chemical compounds. Criteria specifying desired molecular characteristics may be received. A regular expression may be generated based on the received criteria. The chemical documents may be searched using the regular expression. Based on the search, a chemical document may be determined that references a chemical compound satisfying the received criteria. Further, the regular expression may be generated based on the received criteria and a received mutation rule. Based on the generated regular expression and the chemical documents, one or more chemical compounds may be discovered that satisfy both the received criteria and the received mutation rule, but that is are not referenced in the chemical documents.

Abstract: Systems, methods and articles of manufacture are disclosed for searching chemical compounds referenced in chemical literature. References to chemical compounds in the documents may be transformed to corresponding references using a standard notation for representing chemical compounds. Criteria specifying desired molecular characteristics may be received. A regular expression may be generated based on the received criteria. The chemical documents may be searched using the regular expression. Based on the search, a chemical document may be determined that references a chemical compound satisfying the received criteria. Further, the regular expression may be generated based on the received criteria and a received mutation rule. Based on the generated regular expression and the chemical documents, one or more chemical compounds may be discovered that satisfy both the received criteria and the received mutation rule, but that is are not referenced in the chemical documents.

Abstract: Systems, methods and articles of manufacture are disclosed for searching chemical compounds referenced in chemical literature. References to chemical compounds in the documents may be transformed to corresponding references using a standard notation for representing chemical compounds. Criteria specifying desired molecular characteristics may be received. A regular expression may be generated based on the received criteria. The chemical documents may be searched using the regular expression. Based on the search, a chemical document may be determined that references a chemical compound satisfying the received criteria. Further, the regular expression may be generated based on the received criteria and a received mutation rule. Based on the generated regular expression and the chemical documents, one or more chemical compounds may be discovered that satisfy both the received criteria and the received mutation rule, but that is are not referenced in the chemical documents.

Abstract: Systems, methods and articles of manufacture are disclosed for searching chemical compounds referenced in chemical literature. References to chemical compounds in the documents may be transformed to corresponding references using a standard notation for representing chemical compounds. Criteria specifying desired molecular characteristics may be received. A regular expression may be generated based on the received criteria. The chemical documents may be searched using the regular expression. Based on the search, a chemical document may be determined that references a chemical compound satisfying the received criteria. Further, the regular expression may be generated based on the received criteria and a received mutation rule. Based on the generated regular expression and the chemical documents, one or more chemical compounds may be discovered that satisfy both the received criteria and the received mutation rule, but that is are not referenced in the chemical documents.

Abstract: Synthetic polypeptides having at least one antigenic site of a prior protein, methods for their use and manufacture, antibodies raised against such polypeptides and diagnostic kits containing these polypeptides or antibodies.

Abstract: A computer-based method is provided for deriving a genome of an individual. The method comprises the steps of accessing a selector for an individual and a reference template for a group genome, the selector comprising a locus value and a base value; and processing the selector and the reference template to derive a sequence representative of the genome of the individual. The reference template preferably comprises data components representing a probability of occurrence of a base value. The probability of occurrence is based on base value occurrences at corresponding locus values in the group genome. The method of the present invention further comprises computing a base value from the data component in the reference template, for base values not in the selector.

Abstract: A computer-based method is provided for transferring data that includes a genomic sequence. The method includes identifying at least one genomic base in an input data stream comprising said genomic sequence; assigning a base-specific binary code to the at least one genomic base; grouping the base-specific binary code to form a genomic data stream representative of the genomic sequence; assigning a command binary code to at least one command for selectively processing said genomic data stream; and integrating said genomic data stream and said command binary code to form an output binary data stream.

Abstract: Data mining techniques are provided which are effective and efficient for discovering useful information from an amorphous collection or data set of records. For example, the present invention provides for the mining of data, e.g., of several or many records, to discover interesting associations between entries of qualitative text, and covariances between data of quantitative numerical types, in records. Although not limited thereto, the invention has particular application and advantage when the data is of a type such as clinical, pharmacogenomic, forensic, police and financial records, which are characterized by many varied entries, since the problem is then said to be one of “high dimensionality” which has posed mathematical and technical difficulties for researchers. This is especially true when considering strong negative associations and negative covariance, i.e.

Abstract: A method for the agglomeration of alumina particles, the method comprising the steps of comminuting a plurality of alumina particles having a soda content of less than approximately 0.4% by weight to a D50 of less than 12 ?m, adding a quantity of pseudo-boehmite as an aqueous suspension having a pH of from about 2 to 6 to the plurality of alumina particles to form a mixture such that the quantity of pseudo-boehmite is between about 0.8 wt % and 5 wt % based on weight of the mixture, and spray drying the mixture to produce agglomerated granules.

Abstract: A computer-based method is provided for deriving a reference sequence for expressing a group genome. The method includes determining a probability of occurrence for a base value in the reference sequence based on base value occurrences in the group genome. The determined probability of occurrence is then inserted in the reference sequence. The probability of occurrence is preferably determined for a plurality of base values.

Abstract: Data mining techniques are provided which are effective and efficient for discovering useful information from an amorphous collection or data set of records. For example, the present invention provides for the mining of data, e.g., of several or many records, to discover interesting associations between entries of qualitative text, and covariances between data of quantitative numerical types, in records. Although not limited thereto, the invention has particular application and advantage when the data is of a type such as clinical, pharmacogenomic, forensic, police and financial records, which are characterized by many varied entries, since the problem is then said to be one of “high dimensionality” which has posed mathematical and technical difficulties for researchers. This is especially true when considering strong negative associations and negative covariance, i.e.

Abstract: A computer-based method is provided for transferring data that includes a genomic sequence. The method includes identifying at least one genomic base in an input data stream comprising said genomic sequence; assigning a base-specific binary code to the at least one genomic base; grouping the base-specific binary code to form a genomic data stream representative of the genomic sequence; assigning a command binary code to at least one command for selectively processing said genomic data stream; and integrating said genomic data stream and said command binary code to form an output binary data stream.

Abstract: Synthetic polypeptides having at least one antigenic site of a prior protein, methods for their use and manufacture, antibodies raised against such polypeptides and diagnostic kits containing these polypeptides or antibodies.

Abstract: A method for generating data characterizing an item described by an ordered string of characters, comprises the steps of: (i) for a set of separation metrics each representing a unique number of positions of separation between arbitrary characters in a character group in the ordered string of characters, associating first with each separation metric; generating a set of character groups, wherein each character group comprises at least two characters contained within the ordered string of characters; and (ii) for at least one given character group in the set of character groups, for each given separation metric in the set of separation metrics, generating second data representing number of occurrences that the given character group satisfies the given separation metric; generating third data associated with the given character group, wherein the third data is based upon the second data and the first data; and storing the third data in memory for subsequent use.

Abstract: Synthetic polypeptides having at least one antigenic site of a prion protein, methods for their use and manufacture, antibodies raised against such polypeptides and diagnostic kits containing these polypeptides or antibodies.

Abstract: An analogue of lutenising hormone-releasing hormone (LHRH) having the amino acid sequence: pGlg-His-Trp-Ser-Tyr-X-Len-Arg-Pro-Gly-Y-Zwherein X represents Gly or a D-amino acid, Y represents one or more amino acid residues, which may be the same or different, and Z represents Cys or Tyr, such that the solution conformation of said analogue is substantially similar to that of native LHRH. The analogues may be used to prepare vaccines for reducing fertility in mammals.

Abstract: Synthetic polypeptides having at least one antigenic site of a prion protein are disclosed together methods for their use and manufacture and antibodies raised against such polypeptides. Diagnostic kits using the polypeptides and/or antibodies are also disclosed.