Patents by Inventor Benjamin G. Davis
Benjamin G. Davis has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Publication number: 20230272002Abstract: The present invention relates to the photoredox-mediated functionalization of proteins with chemical groups via radical generated C—C bond formation, by using specific boronate and sulfone precursor compounds. The present invention also relates to functionalized proteins that can be generated via this method and to the specific boronate and sulfone precursor compounds themselves.Type: ApplicationFiled: July 15, 2021Publication date: August 31, 2023Inventors: Patrick G. Isenegger, Benjamin G. Davis, Brian Josephson, Veronique Gouverneur, Charlie Fehl, Adeline W J Poh, Andrew M. Giltrap, Simon Nadal, Yibo Zeng, Jeroen Sap, Oluwatobi Arisa
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Patent number: 11559581Abstract: Described herein are antibody conjugates and methods of making antibody conjugates.Type: GrantFiled: January 8, 2016Date of Patent: January 24, 2023Assignee: OXFORD UNIVERSITY INNOVATION LIMITEDInventors: Benjamin G. Davis, Keisuke Yamamoto, Thomas Taylor, Thomas B. Parsons, Jonathan Goodfellow
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Publication number: 20220025419Abstract: A process for the production of a glycoconjugate by N-glycosylation of a protein or peptide comprising the sequence D/E-X-N-X-S/T (SEQ ID NO:1), wherein each X is the same or different and is any natural amino acid other than proline, wherein the process comprises reacting the protein or peptide with a polyisoprenyl pyrophosphate of formula (I), or a salt thereof, in the presence of PglB: to produce the glycoconjugate comprising the protein or peptide having a saccharide [S1] linked to the asparagine in the sequence D/E-X-N-X-S/T (SEQ ID NO:1). Polyisoprenylpyrophosphates used as substrates in the biocatalytic process are also provided, as well as certain glycoconjugates.Type: ApplicationFiled: March 2, 2021Publication date: January 27, 2022Inventors: Benjamin G. DAVIS, Balakumar VIJAYAKRISHNAN, Feng LIU, Michael WACKER, Amirreza FARIDMOAYER, Michael Thomas KOWARIK
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Patent number: 9963518Abstract: Compounds which inhibit Wza-mcdiated polysaccharide transport are useful in the prevention or treatment of bacterial infection, in particular of E. coli infection. The compounds are typically cyclic oligosaccharides such as cyclodextrins, which bear positively charged functional groups at the primary carbon position.Type: GrantFiled: August 20, 2012Date of Patent: May 8, 2018Assignee: Oxford University Innovation LimitedInventors: Lingbing Kong, Benjamin G. Davis, Hagan Bayley
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Publication number: 20160361436Abstract: Described herein are antibody conjugates and methods of making antibody conjugates.Type: ApplicationFiled: January 8, 2016Publication date: December 15, 2016Inventors: Benjamin G. Davis, Keisuke Yamamoto, Thomas Taylor, Thomas B. Parsons, Jonathan Goodfellow
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Publication number: 20160257983Abstract: A process for the production of a glycoconjugate by N-glycosylation of a protein or peptide comprising the sequence D/E-X—N—X—S/T, wherein each X is the same or different and is any natural amino acid other than proline, wherein the process comprises reacting the protein or peptide with a polyisoprenyl pyrophosphate of formula (I), or a salt thereof, in the presence of PglB: (I) to produce the glycoconjugate comprising the protein or peptide having a saccharide [SI] linked to the asparagine in the sequence D/E-X—N—X—S/T. Polyisoprenylpyrophosphates used as substrates in the biocatalytic process are also provided, as well as certain glycoconjugates.Type: ApplicationFiled: October 15, 2014Publication date: September 8, 2016Applicant: ISIS INNOVATION LIMITEDInventors: Benjamin G. DAVIS, Balakumar VIJAYAKRISHNAN, Feng LUI, Michael WACKER, Amirreza FARIDMOAYER, Michael Thomas KOWARIK
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Patent number: 9023763Abstract: Compounds which are trehalose-6-phosphate or trehalose-6-phosphonate precursors of formula (I) or agriculturally acceptable salts thereof are provided: (I) The compounds are useful in increasing starch production in plants.Type: GrantFiled: April 23, 2012Date of Patent: May 5, 2015Assignee: Isis Innovation LimitedInventors: Ram Sagar, Lucia F. Primavesi, Matthew J. Paul, Benjamin G. Davis
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Publication number: 20140296180Abstract: Compounds which inhibit Wza-mcdiated polysaccharide transport are useful in the prevention or treatment of bacterial infection, in particular of E. coli infection. The compounds are typically cyclic oligosaccharides such as cyclodextrins, which bear positively charged functional groups at the primary carbon position.Type: ApplicationFiled: August 20, 2012Publication date: October 2, 2014Applicant: ISIS INNOVATION LIMITEDInventors: Lingbing Kong, Benjamin G. Davis, Hagan Bayley
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Publication number: 20140113820Abstract: Compounds which are trehalose-6-phosphate or trehalose-6-phosphonate precursors of formula (I) or agriculturally acceptable salts thereof are provided: (I) The compounds are useful in increasing starch production in plants.Type: ApplicationFiled: April 23, 2012Publication date: April 24, 2014Applicant: ISIS INNOVATION LIMITEDInventors: Ram Sagar, Lucia F. Primavesi, Matthew J. Paul, Benjamin G. Davis
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Patent number: 8431121Abstract: This invention provides chimeric molecules that are catalytic antagonists of a target molecule. The catalytic antagonists of this invention preferably comprise a targeting moiety attached to an enzyme that degrades the molecule specifically bound by the targeting moiety. The catalytic antagonists of this invention thus bind to a target recognized by the targeting moiety (e.g., a receptor) the enzyme component of the chimera then degrades all or part of the target. This typically results in a reduction or loss of activity of the target and release of the chimeric molecule. The chimeric molecule is then free to attack and degrade another target molecule.Type: GrantFiled: November 23, 2010Date of Patent: April 30, 2013Assignees: Danisco US Inc., Governing Council of the University of TorontoInventors: Benjamin G. Davis, John Bryan Jones, Richard R. Bott, Karl John Sanford, David Aaron Estell
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Publication number: 20110262419Abstract: This invention provides chimeric molecules that are catalytic antagonists of a target molecule. The catalytic antagonists of this invention preferably comprise a targeting moiety attached to an enzyme that degrades the molecule specifically bound by the targeting moiety. The catalytic antagonists of this invention thus bind to a target recognized by the targeting moiety (e.g., a receptor) the enzyme component of the chimera then degrades all or part of the target. This typically results in a reduction or loss of activity of the target and release of the chimeric molecule. The chimeric molecule is then free to attack and degrade another target molecule.Type: ApplicationFiled: November 23, 2010Publication date: October 27, 2011Applicant: DANISCO US, INC.Inventors: Benjamin G. Davis, John Bryan Jones, Richard R. Bott, Karl John Stanford, David Aaron Estell
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Patent number: 7572604Abstract: A modified polypeptide having carbohydrate processing enzymatic activity is provided, said polypeptide comprising an amino acid sequence selected from: (a) the amino acid sequence of SEQ ID NO:2 comprising a mutation in at least one of W433, E432 and M439; (b) the amino acid sequence of an enzyme of glycosyl hydrolase family 1, comprising at least one mutation at an amino acid residue equivalent to W433, E432 or M439 of SEQ ID NO:2; and (c) a variant of (a) or (b) having carbohydrate processing enzymatic activity and comprising at least one amino acid mutation at a position equivalent to W433, E432 or M439 of SEQ ID NO:2.Type: GrantFiled: October 7, 2003Date of Patent: August 11, 2009Assignee: Isis Innovation LimitedInventor: Benjamin G. Davis
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Publication number: 20090181444Abstract: A modified polypeptide having carbohydrate processing enzymatic activity is provided, said polypeptide comprising an amino acid sequence selected from: (a) the amino acid sequence of SEQ ID NO:2 comprising a mutation in at least one of W433, E432 and M439; (b) the amino acid sequence of an enzyme of glycosyl hydrolase family 1, comprising at least one mutation at an amino acid residue equivalent to W433, E432 or M439 of SEQ ID NO:2; and (c) a variant of (a) or (b) having carbohydrate processing enzymatic activity and comprising at least one amino acid mutation at a position equivalent to W433, E432 or M439 of SEQ ID NO:2.Type: ApplicationFiled: October 7, 2003Publication date: July 16, 2009Inventor: Benjamin G. Davis
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Publication number: 20080193389Abstract: The present invention is directed to glyodendrimeric proteases, composition with glycodendrimeric proteases and methods for inhibiting adhesion binding in microorganisms by contacting microorganisms with a glycodendrimeric protease or a composition with a glycodendrimeric protease. The invention may be used to treat patients in need of treatment.Type: ApplicationFiled: October 20, 2006Publication date: August 14, 2008Inventors: Richard R. Bott, M. M. Cowan, Benjamin G. Davis, John Bryan Jones
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Patent number: 7371553Abstract: This invention provides modified enzymes comprising one or more amino acid residues replaced by cysteine residues, where the cysteine residues are modified by replacing the thiol hydrogen in the cysteine residues with a substituent group providing a thiol side chain comprising a multiply charged moiety. The enzymes show improved interaction and/or specificity and/or activity with charged substrates.Type: GrantFiled: November 19, 2004Date of Patent: May 13, 2008Assignees: Genencor International, Inc., The Governing Council of the University of TorontoInventors: Benjamin G. Davis, John Bryan Jones, Richard R. Bott
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Patent number: 6930180Abstract: The present invention relates to a chemically modified mutant protein including a cysteine residue substituted for a residue other than cysteine in a precursor protein, the substituted cysteine residue being subsequently modified by reacting the cysteine residue with a glycosylated thiosulfonate. Also, a method of producing the chemically modified mutant protein is provided. The present invention also relates to a glycosylated methanethiosulfonate. Another aspect of the present invention is a method of modifying the functional characteristics of a protein including providing a protein and reacting the protein with a glycosylated methanethiosulfonate reagent under conditions effective to produce a glycoprotein with altered functional characteristics as compared to the protein. In addition, the present invention relates to methods of determining the structure-function relationships of chemically modified mutant proteins.Type: GrantFiled: February 1, 2002Date of Patent: August 16, 2005Assignee: Genencor International, Inc.Inventors: J. Bryan Jones, Benjamin G. Davis
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Publication number: 20040170618Abstract: This invention provides chimeric molecules that are catalytic antagonists of a target molecule. The catalytic antagonists of this invention preferably comprise a targeting moiety attached to an enzyme that degrades the molecule specifically bound by the targeting moiety. The catalytic antagonists of this invention thus bind to a target recognized by the targeting moiety (e.g., a receptor) the enzyme component of the chimera then degrades all or part of the target. This typically results in a reduction or loss of activity of the target and release of the chimeric molecule. The chimeric molecule is then free to attack and degrade another target molecule.Type: ApplicationFiled: March 1, 2004Publication date: September 2, 2004Inventors: Benjamin G. Davis, John Bryan Jones, Richard R. Bott, Karl John Sanford, David Aaron Estell
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Publication number: 20040097720Abstract: The present invention is directed to glyodendrimeric proteases, composition with glycodendrimeric proteases and methods for inhibiting adhesion binding in microorganisms by contacting microorganisms with a glycodendrimeric protease or a composition with a glycodendrimeric protease. The invention may be used to treat patients in need of treatment.Type: ApplicationFiled: April 16, 2003Publication date: May 20, 2004Inventors: Richard R. Bott, M. M. Cowan, Benjamin G. Davis, John Bryan Jones
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Patent number: 6627744Abstract: The present invention relates to a chemically modified mutant protein including a cysteine residue substituted for a residue other than cysteine n a precursor protein, the substituted cysteine residue being subsequently modified by reacting the cysteine residue with a glycosylated thiosulfonate. Also a method of producing the chemically modified mutant protein is provided. The present invention also relates to a glycosylated methanethiosulfonate. Another aspect of the present invention is a method of modifying the functional characteristics of a protein including providing a protein and reacting the protein with a glycosylated methanethiosulfonate reagent under conditions effective to produce a glycoprotein with altered functional characteristics as compared to the protein. In addition, the present invention relates to methods of determining the structure-function relationships of chemically modified mutant proteins.Type: GrantFiled: April 2, 2001Date of Patent: September 30, 2003Assignee: Genencor International, Inc.Inventors: Benjamin G. Davis, John Bryan Jones, Richard R. Bott
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Patent number: 6512098Abstract: The present invention relates to a chemically modified mutant protein including a cysteine residue substituted for a residue other than cysteine in a precursor protein, the substituted cysteine residue being subsequently modified by reacting the cysteine residue with a glycosylated thiosulfonate. Also, a method of producing the chemically modified mutant protein is provided. The present invention also relates to a glycosylated methanethiosulfonate. Another aspect of the present invention is a method of modifying the functional characteristics of a protein including providing a protein and reacting the protein with a glycosylated methanethiosulfonate reagent under conditions effective to produce a glycoprotein with altered functional characteristics as compared to the protein. In addition, the present invention relates to methods of determining the structure-function relationships of chemically modified mutant proteins.Type: GrantFiled: July 2, 1999Date of Patent: January 28, 2003Assignees: Genencor International, Inc.Inventors: J. Bryan Jones, Benjamin G. Davis