Patents by Inventor Benjamin MCNALLY

Benjamin MCNALLY has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • LIBRARY PREPARATION AND ANALYTICAL METHODS FOR PRESERVING TOPOLOGICAL INFORMATION OF CELL-FREE DNA
    Publication number: 20260009070
    Abstract: Methods and systems for constructing cfDNA sequence libraries, including methods and systems for sequencing 5? and/or 3? cfDNA overhangs to identify overhang length and sequence topology data are described herein. The method can comprise, for example, the use of the cfDNA topology data to generate cfDNA overhang sequence libraries.
    Type: Application
    Filed: December 15, 2023
    Publication date: January 8, 2026
    Applicants: Foundation Medicine, Inc., Roche Sequencing Solutions, Inc.
    Inventors: Cassandra BURKE, Benjamin MCNALLY, David PENKLER
  • Use of Nanopore Arrays For Multiplex Sequencing of Nucleic Acids
    Publication number: 20130256118
    Abstract: Described are techniques for optical detection of single molecule signals from a nanopore array for analysis of nucleic acid sequences. These techniques are useful for rapid multiplexed DNA sequencing.
    Type: Application
    Filed: May 11, 2011
    Publication date: October 3, 2013
    Applicant: TRUSTEES OF BOSTON UNIVERSITY
    Inventors: Amit Meller, Zhiping Weng, Alon Singer, Benjamin McNally
  • SEQUENCE PRESERVED DNA CONVERSION FOR OPTICAL NANOPORE SEQUENCING
    Publication number: 20120316075
    Abstract: The present invention relates to a method for conversion of a target nucleic acid molecule according to a predetermined nucleotide code into a converted nucleic acid molecule. The converted nucleic acid molecule has utility for determining the nucleotide sequence of the target nucleic acid molecule, for example, using a nanopore.
    Type: Application
    Filed: March 30, 2012
    Publication date: December 13, 2012
    Applicant: NOBLEGEN BIOSCIENCES, INC.
    Inventors: Philip R. BUZBY, Amit MELLER, Benjamin MCNALLY, Andy FAN, Edyta OLEJNIK-KRZYNMANSKA