Patents by Inventor Bruce D. Walker

Bruce D. Walker has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20220323570
    Abstract: A method of preventing or treating HIV in a subject includes selecting two or more HIV CTL epitopes from an HIV proteome that have a network score that meets a threshold value. The network score for a given epitope can be determined by generating at least one network representing protein structure, calculating a set of network parameters, combining the network parameters to determine a network score for each amino acid residue in the protein structure, generating a network score for each of a plurality of epitopes as a weighted linear combination of the amino acid residues of the epitopes, and selecting two or more epitopes according to their network score. An effective amount of a T cell immunogen composition and a pharmaceutically acceptable carrier is administered to the subject. The T cell immunogen composition includes the two or more selected HIV CTL epitopes.
    Type: Application
    Filed: March 12, 2020
    Publication date: October 13, 2022
    Inventors: Bruce D. WALKER, Gaurav D. GAIHA, Elizabeth ROSSIN
  • Publication number: 20210317192
    Abstract: Disclosed herein are methods and compositions for treating a subject having or at risk of having an HIV infection. Disclosed herein are peptide immunogens and nucleic acids that have epitopes in which mutations are most likely to have deleterious effects on the HIV virus. An algorithm is disclosed for the selection of the epitopes based on the HIV fitness landscape, and it accounts for the effect of coupling mutations.
    Type: Application
    Filed: May 29, 2020
    Publication date: October 14, 2021
    Applicants: Massachusetts Institute of Technology, The General Hospital Corporation, Beth Israel Deaconess Medical Center, Inc.
    Inventors: Darrell J. Irvine, Dan H. Barouch, Arup K. Chakraborty, Dariusz Murakowski, Bruce D. Walker, John Barton, Andrew Ferguson
  • Publication number: 20200377576
    Abstract: Disclosed herein are methods and compositions for treating a subject having or at risk of having an HIV infection. Disclosed herein are peptide immunogens and nucleic acids that have epitopes in which mutations are most likely to have deleterious effects on the HIV virus. An algorithm is disclosed for the selection of the epitopes based on the HIV fitness landscape, and it accounts for the effect of coupling mutations.
    Type: Application
    Filed: May 29, 2020
    Publication date: December 3, 2020
    Applicants: Massachusetts Institute of Technology, The General Hospital Corporation, Beth Israel Deaconess Medical Center, Inc.
    Inventors: Darrell J. Irvine, Dan H. Barouch, Arup K. Chakraborty, Dariusz Murakowski, Bruce D. Walker, John Barton, Andrew Ferguson
  • Patent number: 9415070
    Abstract: The invention provides compositions and methods for delivering an agent to virally infected tissues and/or cells of a subject by conjugating agent-loaded nanoparticles to virus-specific T cells, such as cytotoxic T lymphocytes. The agent may be a latency-reversing drug (LRD), an antiviral agent and/or an agent that enhances cytotoxic efficacy of T lymphocytes.
    Type: Grant
    Filed: November 8, 2013
    Date of Patent: August 16, 2016
    Assignees: Massachusetts Institute of Technology, The General Hospital Corporation
    Inventors: Darrell J. Irvine, Bruce D. Walker, Richard Bradley Jones
  • Publication number: 20140170221
    Abstract: The invention provides compositions and methods for delivering an agent to virally infected tissues and/or cells of a subject by conjugating agent-loaded nanoparticles to virus-specific T cells, such as cytotoxic T lymphocytes. The agent may be a latency-reversing drug (LRD), an antiviral agent and/or an agent that enhances cytotoxic efficacy of T lymphocytes.
    Type: Application
    Filed: November 8, 2013
    Publication date: June 19, 2014
    Applicants: The General Hospital Corporation d/b/a Massachusetts General Hospital, Massachusetts Institute of Technology
    Inventors: Darrell J. Irvine, Bruce D. Walker, Richard Bradley Jones
  • Publication number: 20090246821
    Abstract: The invention includes compositions comprising substantially purified peroxiredoxin that are useful in methods for the treatment and prevention of HIV-1 infection. The invention also includes methods for the treatment and prevention of HIV-1 infection comprising contacting a composition of the invention with a human patient. Additionally, the invention includes antibodies and kits useful in the treatment and prevention of HIV-1 infection.
    Type: Application
    Filed: August 20, 2008
    Publication date: October 1, 2009
    Applicant: The General Hospital Corporation
    Inventors: Ralf Geiben Lynn, Bruce D. Walker
  • Patent number: 7510828
    Abstract: The invention includes compositions comprising substantially purified serpin that are useful in methods for the treatment and prevention of HIV infection. The invention also includes methods for the treatment and prevention of HIV infection comprising contacting a composition of the invention with a human patient or treating HIV infection by introducing into a cell susceptible to HIV infection a DNA molecule encoding a serpin. Additionally, the invention includes antibodies and kits useful in the detection, treatment, and prevention of HIV infection.
    Type: Grant
    Filed: July 15, 2004
    Date of Patent: March 31, 2009
    Inventors: Ralf Geiben Lynn, Bruce D. Walker
  • Patent number: 7201904
    Abstract: The invention provides compositions containing HCV epitopes, which are recognized by cytotoxic T lymphocytes. Such polypeptides are used in prophylactic vaccines, immunotherapies, and assays to monitor the progress or success of immune interventions. The compositions are optimized to elicit an immune response in a genetically-diverse population of individuals.
    Type: Grant
    Filed: May 16, 2003
    Date of Patent: April 10, 2007
    Assignee: The General Hospital Corporation
    Inventors: Georg Lauer, Kei Ouchi, Bruce D. Walker
  • Patent number: 6974574
    Abstract: The invention features an immunogenic composition containing a frequently-recognized epitope of an HIV-1 accessory protein such as Vpr and methods of inducing an immune response using such an epitope. The epitope peptide contains the amino acid sequence ALIRILQQL of a functionally active domain or a structural domain of the accessory protein.
    Type: Grant
    Filed: August 16, 2002
    Date of Patent: December 13, 2005
    Assignee: The General Hospital Corporation
    Inventors: Bruce D. Walker, Marcus Altfeld
  • Publication number: 20040105868
    Abstract: The invention provides compositions containing HCV epitopes, which are recognized by cytotoxic T lymphocytes. Such polypeptides are used in prophylactic vaccines, immunotherapies, and assays to monitor the progress or success of immune interventions. The compositions are optimized to elicit an immune response in a genetically-diverse population of individuals.
    Type: Application
    Filed: May 16, 2003
    Publication date: June 3, 2004
    Inventors: Georg Lauer, Kei Ouchi, Bruce D. Walker
  • Publication number: 20040094585
    Abstract: An apparatus for supporting a stringed musical instrument on a user in which the apparatus comprises a harness that attaches to a single anchor point on the instrument and further cradles the body of the instrument along a length of the harness. The harness includes a tab for engaging the anchor point on the instrument and an adjustable strap forming a single closed loop that further engages the front, back and side surfaces of the instrument during use.
    Type: Application
    Filed: November 19, 2002
    Publication date: May 20, 2004
    Inventor: Bruce D. Walker
  • Publication number: 20040001845
    Abstract: The invention provides compositions containing HIV epitopes, which are recognized by cytotoxic T lymphocytes (CTL). Such polypeptides are used in vaccines and immunotherapies. HIV-1 epitopes represent early targets in a naturally-occurring response against HIV-1 infection.
    Type: Application
    Filed: May 20, 2003
    Publication date: January 1, 2004
    Inventors: Marcus Altfeld, Xu Yu, Bruce D. Walker, Marylyn Addo
  • Publication number: 20030219450
    Abstract: The invention features an immunogenic composition containing a frequently-recognized epitope of an HIV-1 accessory protein and methods of inducing an immune response using such an epitope. The epitope peptide contains an amino acid sequence of a functionally active domain or a structural domain of the accessory protein.
    Type: Application
    Filed: August 16, 2002
    Publication date: November 27, 2003
    Inventors: Bruce D. Walker, Marcus Altfeld
  • Publication number: 20030165517
    Abstract: The present invention provides synthetic compounds, antibodies that recognize and bind to these compounds, polynucleotides that encode these compounds, and immune effect or cells raised in response to presentation of these epitopes. The invention further provides methods for inducing an immune response and administering immunotherapy to a subject by delivering the compositions of the invention.
    Type: Application
    Filed: October 29, 2002
    Publication date: September 4, 2003
    Inventors: Charles A. Nicolette, Bruce D. Walker
  • Publication number: 20030162720
    Abstract: The present invention provides synthetic compounds, antibodies that recognize and bind to these compounds, polynucleotides that encode these compounds, and immune effector cells raised in response to presentation of these epitopes. The invention further provides methods for inducing an immune response and administering immunotherapy to a subject by delivering the compositions of the invention.
    Type: Application
    Filed: October 29, 2002
    Publication date: August 28, 2003
    Inventors: Charles A. Nicolette, Bruce D. Walker
  • Publication number: 20020168353
    Abstract: The invention includes compositions comprising substantially purified peroxiredoxin that are useful in methods for the treatment and prevention of HIV-1 infection. The invention also includes methods for the treatment and prevention of HIV-1 infection comprising contacting a composition of the invention with a human patient. Additionally, the invention includes antibodies and kits useful in the treatment and prevention of HIV-1 infection.
    Type: Application
    Filed: January 25, 2002
    Publication date: November 14, 2002
    Inventors: Ralf Geiben Lynn, Bruce D. Walker
  • Publication number: 20020127698
    Abstract: The invention includes compositions comprising substantially purified serpin that are useful in methods for the treatment and prevention of HIV infection. The invention also includes methods for the treatment and prevention of HIV infection comprising contacting a composition of the invention with a human patient or treating HIV infection by introducing into a cell susceptible to HIV infection a DNA molecule encoding a serpin. Additionally, the invention includes antibodies and kits useful in the detection, treatment, and prevention of HIV infection.
    Type: Application
    Filed: January 25, 2002
    Publication date: September 12, 2002
    Inventors: Ralf Geiben Lynn, Bruce D. Walker
  • Patent number: 5972339
    Abstract: A method of producing an HIV-specific helper T cell response in an animal by (1) providing a polypeptide 8 to 50 amino acid residues in length and having a helper T cell epitope of a HIV-1 p24 peptide; and (2) administering to the animal an amount of the polypeptide sufficient to produce an HIV-specific helper T cell response.
    Type: Grant
    Filed: November 13, 1997
    Date of Patent: October 26, 1999
    Assignee: The General Hospital Corporation
    Inventor: Bruce D. Walker
  • Patent number: D536725
    Type: Grant
    Filed: March 8, 2005
    Date of Patent: February 13, 2007
    Inventor: Bruce D. Walker