Patents by Inventor Bryan Julien
Bryan Julien has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Publication number: 20140242658Abstract: The present invention is directed to variant squalene synthase enzymes, including Saccharomyces cerevisiae squalene synthase enzymes, and to nucleic acid molecules encoding these variant enzymes. These variant enzymes produce squalene at a lower rate than the wild-type enzyme, allowing more farnesyl pyrophosphate to be utilized for production of isoprenoid compounds, while still producing sufficient squalene to allow the S. cerevisiae cells to grow without the requirement for supplementation by sterols such as ergosterol. These variant enzymes, therefore, are highly suitable for the efficient production of isoprenoids.Type: ApplicationFiled: May 2, 2014Publication date: August 28, 2014Inventors: Bryan Julien, Richard Burlingame
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Patent number: 8753842Abstract: The present invention is directed to variant squalene synthase enzymes, including Saccharomyces cerevisiae squalene synthase enzymes, and to nucleic acid molecules encoding these variant enzymes. These variant enzymes produce squalene at a lower rate than the wild-type enzyme, allowing more farnesyl pyrophosphate to be utilized for production of isoprenoid compounds, while still producing sufficient squalene to allow the S. cerevisiae cells to grow without the requirement for supplementation by sterols such as ergosterol. These variant enzymes, therefore, are highly suitable for the efficient production of isoprenoids.Type: GrantFiled: May 1, 2013Date of Patent: June 17, 2014Assignee: Allylix, Inc.Inventors: Bryan Julien, Richard Burlingame
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Patent number: 8609371Abstract: The present invention is directed to variant squalene synthase enzymes, including Saccharomyces cerevisiae squalene synthase enzymes, and to nucleic acid molecules encoding these variant enzymes. These variant enzymes produce squalene at a lower rate than the wild-type enzyme, allowing more farnesyl pyrophosphate to be utilized for production of isoprenoid compounds, while still producing sufficient squalene to allow the S. cerevisiae cells to grow without the requirement for supplementation by sterols such as ergosterol. These variant enzymes, therefore, are highly suitable for the efficient production of isoprenoids.Type: GrantFiled: August 12, 2009Date of Patent: December 17, 2013Assignee: Allylix, Inc.Inventors: Bryan Julien, Richard P. Burlingame
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Publication number: 20130236943Abstract: The present invention is directed to variant squalene synthase enzymes, including Saccharomyces cerevisiae squalene synthase enzymes, and to nucleic acid molecules encoding these variant enzymes. These variant enzymes produce squalene at a lower rate than the wild-type enzyme, allowing more farnesyl pyrophosphate to be utilized for production of isoprenoid compounds, while still producing sufficient squalene to allow the S. cerevisiae cells to grow without the requirement for supplementation by sterols such as ergosterol. These variant enzymes, therefore, are highly suitable for the efficient production of isoprenoids.Type: ApplicationFiled: May 1, 2013Publication date: September 12, 2013Inventors: Bryan Julien, Richard Burlingame
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Patent number: 8486659Abstract: The present invention is directed to variant squalene synthase enzymes, including Saccharomyces cerevisiae squalene synthase enzymes, and to nucleic acid molecules encoding these variant enzymes. These variant enzymes produce squalene at a lower rate than the wild-type enzyme, allowing more farnesyl pyrophosphate to be utilized for production of isoprenoid compounds, while still producing sufficient squalene to allow the S. cerevisiae cells to grow without the requirement for supplementation by sterols such as ergosterol. These variant enzymes, therefore, are highly suitable for the efficient production of isoprenoids.Type: GrantFiled: August 12, 2009Date of Patent: July 16, 2013Assignee: Allylix, Inc.Inventors: Bryan Julien, Richard P. Burlingame
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Patent number: 8481286Abstract: The present invention is directed to variant squalene synthase enzymes, including Saccharomyces cerevisiae squalene synthase enzymes, and to nucleic acid molecules encoding these variant enzymes. These variant enzymes produce squalene at a lower rate than the wild-type enzyme, allowing more farnesyl pyrophosphate to be utilized for production of isoprenoid compounds, while still producing sufficient squalene to allow the S. cerevisiae cells to grow without the requirement for supplementation by sterols such as ergosterol. These variant enzymes, therefore, are highly suitable for the efficient production of isoprenoids.Type: GrantFiled: August 12, 2009Date of Patent: July 9, 2013Assignee: Allylix, Inc.Inventors: Bryan Julien, Richard P. Burlingame
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Publication number: 20100151555Abstract: The present invention is directed to variant squalene synthase enzymes, including Saccharomyces cerevisiae squalene synthase enzymes, and to nucleic acid molecules encoding these variant enzymes. These variant enzymes produce squalene at a lower rate than the wild-type enzyme, allowing more farnesyl pyrophosphate to be utilized for production of isoprenoid compounds, while still producing sufficient squalene to allow the S. cerevisiae cells to grow without the requirement for supplementation by sterols such as ergosterol. These variant enzymes, therefore, are highly suitable for the efficient production of isoprenoids.Type: ApplicationFiled: August 12, 2009Publication date: June 17, 2010Applicant: Allylix, Inc.Inventors: Bryan Julien, Richard Burlingame
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Publication number: 20100151519Abstract: The present invention is directed to variant squalene synthase enzymes, including Saccharomyces cerevisiae squalene synthase enzymes, and to nucleic acid molecules encoding these variant enzymes. These variant enzymes produce squalene at a lower rate than the wild-type enzyme, allowing more farnesyl pyrophosphate to be utilized for production of isoprenoid compounds, while still producing sufficient squalene to allow the S. cerevisiae cells to grow without the requirement for supplementation by sterols such as ergosterol. These variant enzymes, therefore, are highly suitable for the efficient production of isoprenoids.Type: ApplicationFiled: August 12, 2009Publication date: June 17, 2010Applicant: Allylix, Inc.Inventors: Bryan Julien, Richard Burlingame
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Patent number: 7732186Abstract: Recombinant nucleic acids that encode all or a portion of the epothilone polyketide synthase (PKS) are used to express recombinant PKS genes in host cells for the production of epothilones, epothilone derivatives, and polyketides that are useful as cancer chemotherapeutics, fungicides, and immunosuppressants.Type: GrantFiled: October 31, 2007Date of Patent: June 8, 2010Assignee: Kosan Biosciences, Inc.Inventors: Bryan Julien, Leonard Katz, Chaitan Khosla, Li Tang, Rainer Ziermann
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Publication number: 20090170172Abstract: Recombinant nucleic acids that encode all or a portion of the epothilone polyketide synthase (PKS) are used to express recombinant PKS genes in host cells for the production of epothilones, epothilone derivatives, and polyketides that are useful as cancer chemotherapeutics, fungicides, and immunosuppressants.Type: ApplicationFiled: October 31, 2007Publication date: July 2, 2009Applicant: Kosan Biosciences, Inc.Inventors: Bryan Julien, Leonard Katz, Chaitan Khosla, Li Tang, Rainer Ziermann
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Publication number: 20090111151Abstract: Recombinant host cells of the suborder Cystobacterineae containing recombinant expression vectors that encode heterologous PKS genes can produce polyketides synthesized by the PKS enzymes encoded on those vectors at high levels.Type: ApplicationFiled: October 31, 2007Publication date: April 30, 2009Applicant: Kosan Biosciences, Inc.Inventors: Bryan Julien, Leonard Katz, Chaitan Khosla
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Patent number: 7402421Abstract: Recombinant nucleic acids that encode all or a portion of the epothilone polyketide synthase (PKS) are used to express recombinant PKS genes in host cells for the production of epothilones, epothilone derivatives, and polyketides that are useful as cancer chemotherapeutics, fungicides, and immunosuppressants.Type: GrantFiled: May 18, 2004Date of Patent: July 22, 2008Assignee: Kosan Biosciences, Inc.Inventors: Bryan Julien, Leonard Katz, Chaitan Khosla, Li Tang, Rainer Ziermann
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Patent number: 7364877Abstract: The sequence of the disorazole polyketide synthase protein gene is disclosed. Domains of disorazole polyketide synthase and polynucleotides encoding them are provided. Methods to prepare disorazoles in pharmaceutically useful quantities are described, as are methods to prepare disorazole analogs and other polyketides using the polynucleotides encoding disorazole polyketide synthase domains or modifying enzymes.Type: GrantFiled: December 5, 2003Date of Patent: April 29, 2008Assignee: Kosan Biosciences, Inc.Inventors: Bryan Julien, Ralph C. Reid
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Patent number: 7332576Abstract: Domains of ambruticin polyketide synthase and modification enzymes and polynucleotides encoding them are provided. Methods to prepare ambruticin in pharmaceutically useful quantities are described, as are methods to prepare ambruticin analogs and other polyketides using the polynucleotides encoding ambruticin synthase domains or modifying enzymes.Type: GrantFiled: March 7, 2005Date of Patent: February 19, 2008Assignee: Kosan Biosciences Inc.Inventors: Christopher D. Reeves, Bryan Julien, Ralph C. Reid
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Patent number: 7220560Abstract: The present invention provides a generalized oxygen-limited cultivation method for myxobacterial strains engineered to heterologously express polyketides synthase (PKS) gene clusters under various oxygen tension conditions, modulating the polyketide congener distribution.Type: GrantFiled: February 25, 2003Date of Patent: May 22, 2007Assignee: Kosan Biosciences IncorporatedInventors: Peter J. Licari, Bryan Julien, Scott Frykman, Hiroko Tsuruta
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Publication number: 20070092954Abstract: Recombinant Myxococcus host cells can be used to produce polyketides, including epothilone and epothilone analogs that can be purified from the fermentation broth and crystallized.Type: ApplicationFiled: August 8, 2005Publication date: April 26, 2007Inventors: Robert Arslanian, Gary Ashley, Scott Frykman, Bryan Julien, Leonard Katz, Chaitan Khosla, Janice Lau, Peter Licari, Rika Regentin, Daniel Santi, Li Tang
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Publication number: 20070015823Abstract: Antifungal compounds represented by formula I where R1, R2, R3 and R4 are as defined herein. Isolated or purified naturally occurring 20,21-dihydro ambruticin compounds. The invention also provides Sorangium cellulosum ambM, ambO, ambP, and ambS mutant strains; a recombinant Sorangium cellulosum strain that produces 24-norambruticin compounds; and a method for treating a fungal infection using a compound of this invention.Type: ApplicationFiled: December 16, 2005Publication date: January 18, 2007Inventors: Zong-Qiang Tian, David Myles, Zhan Wang, Yuan Xu, Bryan Julien, Eduardo Rodriguez, Mark Shimazu, Greg Buchanan, Leonard Katz
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Patent number: 7138279Abstract: A transposon-based mutagenesis method for altering DNA in Sorangium and other Myxococcales host cells is provided, along with vectors and transposases for use in the method.Type: GrantFiled: August 13, 2003Date of Patent: November 21, 2006Assignee: Kosan Biosciences, Inc.Inventor: Bryan Julien
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Patent number: 7129071Abstract: Recombinant nucleic acids that encode all or a portion of the epothilone polyketide synthase (PKS) are used to express recombinant PKS genes in host cells for the production of epothilones, epothilone derivatives, and polyketides that are useful as cancer chemotherapeutics, fungicides, and immunosuppressants.Type: GrantFiled: November 28, 2000Date of Patent: October 31, 2006Assignee: KOSAN Biosciences, Inc.Inventors: Bryan Julien, Leonard Katz, Chaitan Khosla, Li Tang, Rainer Ziermann
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Publication number: 20060223151Abstract: Recombinant host cells of the suborder Cystobacterineae containing recombinant expression vectors that encode heterologous PKS genes can produce polyketides synthesized by the PKS enzymes encoded on those vectors at high levels.Type: ApplicationFiled: September 20, 2005Publication date: October 5, 2006Applicant: Kosan Biosciences, Inc.Inventors: Bryan Julien, Leonard Katz, Chaitan Khosla