Patents by Inventor Cara Ann Tracewell

Cara Ann Tracewell has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240124907
    Abstract: The present disclosure describes the engineering of microbial cells for fermentative production of histamine and provides novel engineered microbial cells and cultures, as well as related histamine production methods.
    Type: Application
    Filed: July 10, 2023
    Publication date: April 18, 2024
    Applicant: Zymergen Inc.
    Inventors: Cara Ann TRACEWELL, Alexander Glennon SHEARER, Michael Shareef SIDDIQUI, Steven M. EDGAR, Nicolaus HERMAN, Murtaza Shabbir HUSSAIN
  • Publication number: 20240052379
    Abstract: Provided herein is a non-naturally occurring microbial organism having a methanol metabolic pathway (MMP) that can enhance the availability of reducing equivalents in the presence of methanol. Such reducing equivalents can be used to increase the product yield of organic compounds produced by the microbial organism, such as 1,4-butanediol (BDO). Also provided herein are methods for using such an organism to produce BDO.
    Type: Application
    Filed: July 3, 2023
    Publication date: February 15, 2024
    Inventors: Anthony P. Burgard, Robin E. Osterhout, Stephen J. Van Dien, Cara Ann Tracewell, Priti Pharkya, Stefan Andrae
  • Patent number: 11898172
    Abstract: The present disclosure provides thiolases and polypeptide variants of 3-hydroxybutyryl-CoA dehydrogenase, nucleic acids encoding the same, vectors comprising the nucleic acids, and cells comprising the polypeptide variants and/or thiolase, the nucleic acids, and/or the vectors. The present disclosure also provides methods of making and using the same, including methods for culturing cells, and for the production of various products, including 3-hydroxybutyryl-CoA (3-HB-CoA), 3-hydroxybutyraldehyde (3-HBal), 3-hydroxybutyrate (3-HB), 1,3-butanediol (1,3-BDO), and esters and amides thereof, and products made from any of these.
    Type: Grant
    Filed: March 29, 2018
    Date of Patent: February 13, 2024
    Assignee: Genomatica, Inc.
    Inventors: Kevin Hoff, Cara Ann Tracewell, Kui Chan, Michael Kuchinskas, Harish Nagarajan
  • Publication number: 20230399647
    Abstract: The present disclosure describes the engineering of microbial cells for fermentative production of ectoine and provides novel engineered microbial cells and cultures, as well as related ectoine production methods.
    Type: Application
    Filed: February 11, 2021
    Publication date: December 14, 2023
    Inventors: Stepan Tymoshenko, Anupam Chowdhury, Zhihao Wang, Jeffrey Mellin, Michael Shareef Siddiqui, Cara Ann Tracewell, Alexander Glennon Shearer, Hannah Edstrom, Michael Blaisse
  • Publication number: 20230332194
    Abstract: Provided herein is a non-naturally occurring microbial organism having a methanol metabolic pathway that can enhance the availability of reducing equivalents in the presence of methanol. Such reducing equivalents can be used to increase the product yield of organic compounds produced by the microbial organism, such as adipate, 6-aminocaproate, hexamethylenediamine or caprolactam. Also provided herein are methods for using such an organism to produce adipate, 6-aminocaproate, hexamethylenediamine or caprolactam.
    Type: Application
    Filed: January 24, 2023
    Publication date: October 19, 2023
    Inventors: Anthony P. BURGARD, Robin E. OSTERHOUT, Stephen J. VAN DIEN, Cara Ann TRACEWELL, Priti PHARKYA, Stefan ANDRAE
  • Patent number: 11753663
    Abstract: Provided herein is a non-naturally occurring microbial organism having a methanol metabolic pathway that can enhance the availability of reducing equivalents in the presence of methanol. Such reducing equivalents can be used to increase the product yield of organic compounds produced by the microbial organism, such as adipate, 6-aminocaproate, hexamethylenediamine or caprolactam. Also provided herein are methods for using such an organism to produce adipate, 6-aminocaproate, hexamethylenediamine or caprolactam.
    Type: Grant
    Filed: December 16, 2013
    Date of Patent: September 12, 2023
    Assignee: Genomatica, Inc.
    Inventors: Anthony P. Burgard, Robin E. Osterhout, Stephen J. Van Dien, Cara Ann Tracewell, Priti Pharkya, Stefan Andrae
  • Patent number: 11739355
    Abstract: The present disclosure describes the engineering of microbial cells for fermentative production of histamine and provides novel engineered microbial cells and cultures, as well as related histamine production methods.
    Type: Grant
    Filed: April 19, 2019
    Date of Patent: August 29, 2023
    Assignee: Zymergen Inc.
    Inventors: Cara Ann Tracewell, Alexander Glennon Shearer, Michael Shareef Siddiqui, Steven M. Edgar, Nicolaus Herman, Murtaza Shabbir Hussain
  • Publication number: 20230175023
    Abstract: The present disclosure describes the engineering of microbial cells for fermentative production of 3,4-dihydroxybenzoic acid and provides novel engineered microbial cells and cultures, as well as related 3,4-dihydroxybenzoic acid production methods.
    Type: Application
    Filed: February 18, 2021
    Publication date: June 8, 2023
    Inventors: Cara Ann Tracewell, Alexander Glennon Shearer, Anupam Chowdhury
  • Publication number: 20230139515
    Abstract: The present disclosure provides thiolases and polypeptide variants of 3-hydroxybutyryl-CoA dehydrogenase, nucleic acids encoding the same, vectors comprising the nucleic acids, and cells comprising the polypeptide variants and/or thiolase, the nucleic acids, and/or the vectors. The present disclosure also provides methods of making and using the same, including methods for culturing cells, and for the production of various products, including 3-hydroxybutyryl-CoA (3-HB-CoA), 3-hydroxybutyraldehyde (3-HBal), 3-hydroxybutyrate (3-HB), 1,3-butanediol (1,3-BDO), and esters and amides thereof, and products made from any of these.
    Type: Application
    Filed: July 14, 2022
    Publication date: May 4, 2023
    Inventors: Kevin Hoff, Cara Ann Tracewell, Kui Chan, Michael Kuchinskas, Harish Nagarajan
  • Publication number: 20230136909
    Abstract: Provided herein is a non-naturally occurring microbial organism having a methanol metabolic pathway that can enhance the availability of reducing equivalents in the presence of methanol. Such reducing equivalents can be used to increase the product yield of organic compounds produced by the microbial organism, such as 3-hydroxyisobutyrate or MAA. Also provided herein are methods for using such an organism to produce 3-hydroxyisobutyrate or MAA.
    Type: Application
    Filed: June 6, 2022
    Publication date: May 4, 2023
    Inventors: Anthony P. Burgard, Robin E. Osterhout, Stephen J. Van Dien, Cara Ann Tracewell, Priti Pharkya, Stefan Andrae
  • Patent number: 11629363
    Abstract: Provided herein is a non-naturally occurring microbial organism having a methanol metabolic pathway that can enhance the availability of reducing equivalents in the presence of methanol. Such reducing equivalents can be used to increase the product yield of organic compounds produced by the microbial organism, such as 1,2-propanediol, n-propanol, 1,3-propanediol or glycerol. Also provided herein are methods for using such an organism to produce 1,2-propanediol, n-propanol, 1,3-propanediol or glycerol.
    Type: Grant
    Filed: January 17, 2018
    Date of Patent: April 18, 2023
    Assignee: Genomatica, Inc.
    Inventors: Anthony P. Burgard, Robin E. Osterhout, Stephen J. Van Dien, Cara Ann Tracewell, Priti Pharkya, Stefan Andrae
  • Patent number: 11535874
    Abstract: Provided herein is a non-naturally occurring microbial organism (NNOMO) having a methanol metabolic pathway (MMP) that can enhance the availability of reducing equivalents in the presence of methanol. Such reducing equivalents can be used to increase the product yield of organic compounds produced by the microbial organism, such as succinate. Also provided herein are methods for using such an organism to produce succinate.
    Type: Grant
    Filed: October 21, 2013
    Date of Patent: December 27, 2022
    Assignee: Genomatica, Inc.
    Inventors: Anthony P. Burgard, Robin E. Osterhout, Stephen J. Van Dien, Cara Ann Tracewell, Priti Pharkya, Stefan Andrae
  • Publication number: 20220325254
    Abstract: The invention provides polypeptides and encoding nucleic acids of aldehyde dehydrogenase variants. The invention also provides cells expressing aldehyde dehydrogenase variants. The invention further provides methods for producing 3-hydroxybutyraldehyde (3-HBal) and/or 1,3-butanediol (1,3-BDO), or an ester or amide thereof, comprising culturing cells expressing an aldehyde dehydrogenase variant or using lysates of such cells. The invention additional provides methods for producing 4-hydroxybutyraldehyde (4-HBal) and/or 1,4-butanediol (1,4-BDO), or an ester or amide thereof, comprising culturing cells expressing an aldehyde dehydrogenase variant or using lysates of such cells.
    Type: Application
    Filed: March 17, 2022
    Publication date: October 13, 2022
    Inventors: Kevin Hoff, Cara Ann Tracewell, Kui Chan, Amit Shah, Joseph Warner, Michael Noble
  • Publication number: 20220315965
    Abstract: The present disclosure describes the engineering of microbial cells for fermentative production of cystathionine and provides novel engineered microbial cells and cultures, as well as related cystathionine production methods. An engineered microbial cell that expresses a heterologous cystathionine beta-synthase or a heterologous cystathionine gamma-synthase, wherein the engineered microbial cell produces cystathionine.
    Type: Application
    Filed: June 24, 2020
    Publication date: October 6, 2022
    Inventors: Cara Ann Tracewell, Alexander Glennon Shearer, Anupam Chowdhury, Steven M. Edgar
  • Patent number: 11447804
    Abstract: Provided herein is a non-naturally occurring microbial organism having a methanol metabolic pathway that can enhance the availability of reducing equivalents in the presence of methanol. Such reducing equivalents can be used to increase the product yield of organic compounds produced by the microbial organism, such as adipate, 6-aminocaproate, hexamethylenediamine or caprolactam. Also provided herein are methods for using such an organism to produce adipate, 6-aminocaproate, hexamethylenediamine or caprolactam.
    Type: Grant
    Filed: November 1, 2018
    Date of Patent: September 20, 2022
    Assignee: Genomatica, Inc.
    Inventors: Anthony P. Burgard, Robin E. Osterhout, Stephen J. Van Dien, Cara Ann Tracewell, Priti Pharkya, Stefan Andrae
  • Publication number: 20220282265
    Abstract: The present disclosure describes the engineering of microbial cells for fermentative production of 3-amino-4-hydroxybenzoic acid and provides novel engineered microbial cells and cultures, as well as related 3-amino-4-hydroxybenzoic acid production methods. Embodiments 1: An engineered microbial cell that produces 3-amino-4-hydroxybenzoic acid, wherein the engineered microbial cell expresses: (a) a non-native 2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy) heptanoate synthase; and (b) a non-native 3-amino-4-benzoic acid synthase.
    Type: Application
    Filed: August 10, 2020
    Publication date: September 8, 2022
    Applicant: Zymergen Inc.
    Inventors: Cara Ann Tracewell, Alexander Glennon Shearer
  • Publication number: 20220162655
    Abstract: The present disclosure describes the engineering of microbial cells for fermentative production of L-homocysteine and provides novel engineered microbial cells and cultures, as well as related L-homocysteine production methods.
    Type: Application
    Filed: March 24, 2020
    Publication date: May 26, 2022
    Applicant: Zymergen Inc.
    Inventors: Michael Shareef Siddiqui, Alexander Glennon Shearer, Franklin Lu, Stefan de Kok, Cara Ann Tracewell, Steven M. Edgar, Jennifer Yip
  • Patent number: 11299716
    Abstract: The invention provides polypeptides and encoding nucleic acids of aldehyde dehydrogenase variants. The invention also provides cells expressing aldehyde dehydrogenase variants. The invention further provides methods for producing 3-hydroxybutyraldehyde (3-HBal) and/or 1,3-butanediol (1,3-BDO), or an ester or amide thereof, comprising culturing cells expressing an aldehyde dehydrogenase variant or using lysates of such cells. The invention additional provides methods for producing 4-hydroxybutyraldehyde (4-HBal) and/or 1,4-butanediol (1,4-BDO), or an ester or amide thereof, comprising culturing cells expressing an aldehyde dehydrogenase variant or using lysates of such cells.
    Type: Grant
    Filed: March 29, 2018
    Date of Patent: April 12, 2022
    Assignee: Genomatica, Inc.
    Inventors: Kevin Hoff, Cara Ann Tracewell, Kui Chan, Amit Shah, Joseph Warner, Michael Noble
  • Publication number: 20220033862
    Abstract: The present disclosure describes the engineering of microbial cells for fermentative production of 2-oxoadipate and provides novel engineered microbial cells and cultures, as well as related 2-oxoadipate production methods.
    Type: Application
    Filed: November 25, 2019
    Publication date: February 3, 2022
    Applicant: Zymergen Inc.
    Inventors: Anupam Chowdhury, Steven M. Edgar, Alexander Glennon Shearer, Cara Ann Tracewell, Stepan Tymoshenko, Zhihao Wang
  • Publication number: 20210180096
    Abstract: The present disclosure describes the engineering of microbial cells for fermentative production of histamine and provides novel engineered microbial cells and cultures, as well as related histamine production methods.
    Type: Application
    Filed: April 19, 2019
    Publication date: June 17, 2021
    Applicant: Zymergen Inc.
    Inventors: Cara Ann Tracewell, Alexander Glennon Shearer, Michael Shareef Siddiqui, Steven M. Edgar, Nicolaus Herman, Murtaza Shabbir Hussain