Patents by Inventor Carlos A. OLIVEIRA

Carlos A. OLIVEIRA has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20190018929
    Abstract: A method is disclosed for predicting in advance whether a melanoma patient is likely to benefit from high dose IL2 therapy in treatment of the cancer. The method makes use of mass spectrometry data obtained from a blood-based sample of the patient and a computer configured as a classifier and making use of a reference set of mass spectral data obtained from a development set of blood-based samples from other melanoma patients. A variety of classifiers for making this prediction are disclosed, including a classifier developed from a set of blood-based samples obtained from melanoma patients treated with high dose IL2 as well as melanoma patients treated with an anti-PD-1 immunotherapy drug. The classifiers developed from anti-PD-1 and IL2 patient sample cohorts can also be used in combination to guide treatment of a melanoma patient.
    Type: Application
    Filed: January 18, 2017
    Publication date: January 17, 2019
    Inventors: Arni Steingrimsson, Carlos Oliveira, Krista Meyer, Joanna Röder, Heinrich Röder
  • Publication number: 20180323049
    Abstract: Hepatocellular carcinoma (HCC) is detected in a patient with liver disease. Mass spectrometry data from a blood-based sample from the patient is compared to a reference set of mass-spectrometry data from a multitude of other patients with liver disease, including patients with and without HCC, in a general purpose computer configured as a classifier. The classifier generates a class label, such as HCC or No HCC, for the test sample. A laboratory system for early detection of HCC in patients with liver disease is also disclosed. Alternative testing strategies using AFP measurement and a reference set for classification in the form of class-labeled mass spectral data from blood-based samples of lung cancer patients are also described, including multi-stage testing.
    Type: Application
    Filed: June 27, 2018
    Publication date: November 8, 2018
    Inventors: Joanna Röder, Carlos Oliveira, Julia Grigorieva, Heinrich Röder
  • Publication number: 20180277249
    Abstract: A method is disclosed of predicting cancer patient response to immune checkpoint inhibitors, e.g., an antibody drug blocking ligand activation of programmed cell death 1 (PD-1) or CTLA4. The method includes obtaining mass spectrometry data from a blood-based sample of the patient, obtaining integrated intensity values in the mass spectrometry data of a multitude of pre-determined mass-spectral features; and operating on the mass spectral data with a programmed computer implementing a classifier. The classifier compares the integrated intensity values with feature values of a training set of class-labeled mass spectral data obtained from a multitude of melanoma patients with a classification algorithm and generates a class label for the sample. A class label “early” or the equivalent predicts the patient is likely to obtain relatively less benefit from the antibody drug and the class label “late” or the equivalent indicates the patient is likely to obtain relatively greater benefit from the antibody drug.
    Type: Application
    Filed: May 29, 2018
    Publication date: September 27, 2018
    Inventors: Joanna Röder, Krista Meyer, Julia Grigorieva, Maxim Tsypin, Carlos Oliveira, Arni Steingrimsson, Heinrich Röder, Senait Asmellash, Kevin Sayers, Caroline Maher
  • Patent number: 10037874
    Abstract: Hepatocellular carcinoma (HCC) is detected in a patient with liver disease. Mass spectrometry data from a blood-based sample from the patient is compared to a reference set of mass-spectrometry data from a multitude of other patients with liver disease, including patients with and without HCC, in a general purpose computer configured as a classifier. The classifier generates a class label, such as HCC or No HCC, for the test sample. A laboratory system for early detection of HCC in patients with liver disease is also disclosed. Alternative testing strategies using AFP measurement and a reference set for classification in the form of class-labeled mass spectral data from blood-based samples of lung cancer patients are also described, including multi-stage testing.
    Type: Grant
    Filed: November 10, 2015
    Date of Patent: July 31, 2018
    Assignees: Biodesix, Inc., The Board of Regents of the University of Texas System
    Inventors: Joanna Röder, Carlos Oliveira, Julia Grigorieva, Heinrich Röder, Devalingam Mahalingam
  • Patent number: 10007766
    Abstract: A method is disclosed of predicting cancer patient response to immune checkpoint inhibitors, e.g., an antibody drug blocking ligand activation of programmed cell death 1 (PD-1) or CTLA4. The method includes obtaining mass spectrometry data from a blood-based sample of the patient, obtaining integrated intensity values in the mass spectrometry data of a multitude of pre-determined mass-spectral features; and operating on the mass spectral data with a programmed computer implementing a classifier. The classifier compares the integrated intensity values with feature values of a training set of class-labeled mass spectral data obtained from a multitude of melanoma patients with a classification algorithm and generates a class label for the sample. A class label “early” or the equivalent predicts the patient is likely to obtain relatively less benefit from the antibody drug and the class label “late” or the equivalent indicates the patient is likely to obtain relatively greater benefit from the antibody drug.
    Type: Grant
    Filed: July 12, 2016
    Date of Patent: June 26, 2018
    Assignee: Biodesix, Inc.
    Inventors: Joanna Röder, Krista Meyer, Julia Grigorieva, Maxim Tsypin, Carlos Oliveira, Arni Steingrimsson, Heinrich Röder, Senait Asmellash, Kevin Sayers, Caroline Maher, Jeffrey Weber
  • Publication number: 20180129780
    Abstract: A programmed computer functioning as a classifier operates on mass spectral data obtained from a blood-based patient sample to predict indolence or aggressiveness of prostate cancer. Methods of generating the classifier and conducting a test on a blood-based sample from a prostate cancer patient using the classifier are described.
    Type: Application
    Filed: September 12, 2017
    Publication date: May 10, 2018
    Inventors: Joanna Röder, Heinrich Röder, Carlos Oliveira
  • Patent number: 9779204
    Abstract: A programmed computer functioning as a classifier operates on mass spectral data obtained from a blood-based patient sample to predict indolence or aggressiveness of prostate cancer. Methods of generating the classifier and conducting a test on a blood-based sample from a prostate cancer patient using the classifier are described.
    Type: Grant
    Filed: September 29, 2015
    Date of Patent: October 3, 2017
    Assignee: Biodesix, Inc.
    Inventors: Joanna Röder, Heinrich Röder, Carlos Oliveira
  • Publication number: 20170216058
    Abstract: A sleeve for mounting a prosthetic unit on a limb is formed in a knitted fabric comprising elastic yarns to allow circumferential extension of the sleeve to grip the limb. Adherent fibres are integrated within the fabric and exposed on the internal surface of the sleeve to provide additional grip. Such fibres can be silicone or silicone based yarns. An end of the sleeve is adapted to couple with a prosthetic unit. The knitted fabric may include yarns of restricted elasticity to limit longitudinal extension of the sleeve, and the elastic yarns and the yarns of restricted elasticity are typically located in discrete sections (2, 4, 6) of the sleeve. Such discrete sections will normally extend longitudinally in the sleeve. The knitted yarns at the end of the sleeve are normally bonded directly to a coupling element (8, 10, 12) for attachment to a prosthetic unit.
    Type: Application
    Filed: July 31, 2015
    Publication date: August 3, 2017
    Inventors: Tilak Dias, Colin Cork, Jose Carlos Oliveira, Richard Arm, William Hurley
  • Publication number: 20170039345
    Abstract: A method is disclosed of predicting cancer patient response to immune checkpoint inhibitors, e.g., an antibody drug blocking ligand activation of programmed cell death 1 (PD-1) or CTLA4. The method includes obtaining mass spectrometry data from a blood-based sample of the patient, obtaining integrated intensity values in the mass spectrometry data of a multitude of pre-determined mass-spectral features; and operating on the mass spectral data with a programmed computer implementing a classifier. The classifier compares the integrated intensity values with feature values of a training set of class-labeled mass spectral data obtained from a multitude of melanoma patients with a classification algorithm and generates a class label for the sample. A class label “early” or the equivalent predicts the patient is likely to obtain relatively less benefit from the antibody drug and the class label “late” or the equivalent indicates the patient is likely to obtain relatively greater benefit from the antibody drug.
    Type: Application
    Filed: July 12, 2016
    Publication date: February 9, 2017
    Inventors: Joanna Röder, Krista Meyer, Julia Grigorieva, Maxim Tsypin, Carlos Oliveira, Arni Steingrimsson, Heinrich Röder, Senait Asmellash, Kevin Sayers, Caroline Maher, Jeffrey Weber
  • Publication number: 20160321561
    Abstract: Classifier generation methods are described in which features used in classification (e.g., mass spectral peaks) are selected, or deselected using bagged filtering. A development sample set is split into two subsets, one of which is used as a training set the other of which is set aside. We define a classifier (e.g., K-nearest neighbor, decision tree, margin-based classifier or other) using the training subset and at least one of the features (or subsets of two or more features in combination). We apply the classifier to a subset of samples. A filter is applied to the performance of the classifier on the sample subset and the at least one feature is added to a “filtered feature list” if the classifier performance passes the filter. We do this for many different realizations of the separation of the development sample set into two subsets, and, for each realization, different features or sets of features in combination.
    Type: Application
    Filed: April 5, 2016
    Publication date: November 3, 2016
    Inventors: Heinrich Röder, Joanna Röder, Arni Steingrimsson, Carlos Oliveira
  • Publication number: 20160163522
    Abstract: Hepatocellular carcinoma (HCC) is detected in a patient with liver disease. Mass spectrometry data from a blood-based sample from the patient is compared to a reference set of mass-spectrometry data from a multitude of other patients with liver disease, including patients with and without HCC, in a general purpose computer configured as a classifier. The classifier generates a class label, such as HCC or No HCC, for the test sample. A laboratory system for early detection of HCC in patients with liver disease is also disclosed. Alternative testing strategies using AFP measurement and a reference set for classification in the form of class-labeled mass spectral data from blood-based samples of lung cancer patients are also described, including multi-stage testing.
    Type: Application
    Filed: November 10, 2015
    Publication date: June 9, 2016
    Inventors: Joanna Röder, Carlos Oliveira, Julia Grigorieva, Heinrich Röder, Devalingam Mahalingam
  • Publication number: 20160098514
    Abstract: A programmed computer functioning as a classifier operates on mass spectral data obtained from a blood-based patient sample to predict indolence or aggressiveness of prostate cancer. Methods of generating the classifier and conducting a test on a blood-based sample from a prostate cancer patient using the classifier are described.
    Type: Application
    Filed: September 29, 2015
    Publication date: April 7, 2016
    Inventors: Joanna Röder, Heinrich Röder, Carlos Oliveira
  • Publication number: 20110224518
    Abstract: The present invention provides for a handheld apparatus for in vivo examination of the viability of a biological tissue.
    Type: Application
    Filed: July 22, 2009
    Publication date: September 15, 2011
    Inventors: Jaafar Tindi, Farah Khan, Christopher D. Hue, Chinedu Chukuigwe, Saumya Banerjee, Rohan Shah, Alina Levchuck, Marom Bikson, Luis Cardoso, Prasad Adusumilli, Nabil Rizk, Luis Carlos Oliveira, Varun Bansai
  • Patent number: 7965194
    Abstract: An operation abnormality detector of electronic modules detects an abnormality in an associated device, such as the presence of a foreign body nearby the device. The detector can be used, for example, in the mouthpiece of a card reader of a self-serving banking machine. Upon detecting an abnormality, operation of the machine can be suspended by turning off its display, precluding fraud with unauthorized cards or vandalism. Upon detecting the abnormality, an alert is set to an alarm central.
    Type: Grant
    Filed: May 23, 2007
    Date of Patent: June 21, 2011
    Assignee: Banco Bradesco S.A.
    Inventor: Joao Carlos Oliveira Martini
  • Publication number: 20100316328
    Abstract: Fiber optic position transducer that includes a magnetic or electromagnetic element, one or more segments of magnetostrictive material, Fiber Bragg Grating Sensors, a rod of material that is impenetrable to magnetic fields, optical fiber. One or more of the sensors is fixed upon a segment of magnetostrictive material, which is fixed to a rod, and may only be displaced longitudinally. The Fiber Bragg Grating Sensors have different wave lengths and are made of the same optical fiber. The magnetic or electromagnetic element included may be made of NdFeB (Neodymium Iron Boron) or metal alloys of TbDyFe (Terbium, Dysprosium and Iron), such as TX, Terphenol-D and others. It is applied to a control flow valve in an oil well, and it also refers to the calibration process of the position of the transducer.
    Type: Application
    Filed: December 28, 2009
    Publication date: December 16, 2010
    Applicants: PETROLEO BRASILEIRO S.A. - PETROBRAS, PONTIFICIA UNIVERSIDADE CATOLICA DO RIO DE JANEIRO
    Inventors: José Luiz Arias Vidal, Ricardo Munoz Freitas, Arthur Martins Barbosa Braga, Luiz Carlos Guedes Valente, Antônio Carlos Oliveira Bruno, Hélio Ricardo Carvalho
  • Publication number: 20090231130
    Abstract: An operation abnormality detector of electronic modules detects an abnormality in an associated device, such as the presence of a foreign body nearby the device. The detector can be used, for example, in the mouthpiece of a card reader of a self-serving banking machine. Upon detecting an abnormality, operation of the machine can be suspended by turning off its display, precluding fraud with unauthorized cards or vandalism. Upon detecting the abnormality, an alert is set to an alarm central.
    Type: Application
    Filed: May 23, 2007
    Publication date: September 17, 2009
    Applicant: BANCO BRADESCO S.A.
    Inventor: Joao Carlos Oliveira Martini
  • Publication number: 20090052831
    Abstract: Fiber optic position transducer that includes a magnetic or electromagnetic element, one or more segments of magnetostrictive material, Fiber Bragg Grating Sensors, a rod of material that is impenetrable to magnetic fields, optical fiber. One or more of the sensors is fixed upon a segment of magnetostrictive material, which is fixed to a rod, and may only be displaced longitudinally. The Fiber Bragg Grating Sensors have different wave lengths and are made of the same optical fiber. The magnetic or electromagnetic element included may be made of NdFeB (Neodymium Iron Boron) or metal alloys of TbDyFe (Terbium, Dysprosium and Iron), such as TX, Terphenol-D and others. It is applied to a control flow valve in an oil well, and it also refers to the calibration process of the position of the transducer.
    Type: Application
    Filed: June 30, 2008
    Publication date: February 26, 2009
    Applicants: PETROLEO BRASILEIRO S.A. - PETROBRAS, PONTIFICIA UNIVERSIDADE CATOLICA DO RIO DE JANEIRO
    Inventors: Jose Luiz Arias Vidal, Ricardo Munoz Freitas, Arthur Martins Barbosa Braga, Luis Carlos Guedes Valente, Antonio Carlos Oliveira Bruno, Helio Ricardo Carvalho
  • Publication number: 20040200628
    Abstract: A hand-held electric machine tool (1) with an at least partly rotary-driven tool receptacle (2) for a tool and a press switch (5) arranged at a handle (4) on the workpiece side for activating the connection of a power source (6) to an electric motor (7) connected to control electronics (10) which are connected to a force sensor (8), wherein the force sensor (8) is arranged between the tool receptacle (2) and the handle (4) and is designed for measuring a pressing force (F) of the hand-held electric machine tool pressing against a workpiece. In addition, an intuitive control process for the hand-held electric machine tool (1) is claimed.
    Type: Application
    Filed: April 8, 2004
    Publication date: October 14, 2004
    Inventors: Harald Schmitzer, Hans Boeni, Carlos Oliveira, Roland Schaer, Christoph Wuersch
  • Patent number: 5677354
    Abstract: A process for reclaiming cured or semi-cured rubber, by subjecting a mass of rubber to be reclaimed to a solvent effective to swell said mass, passing the formed swollen mass of rubber through restriction means having small openings, such as a perforated plate, deleterious or devulcanizing substances being comprised in at least one of said restriction means and said swollen mass of rubber.
    Type: Grant
    Filed: February 29, 1996
    Date of Patent: October 14, 1997
    Inventor: Luiz Carlos Oliveira Da Cunha Lima