Patents by Inventor Carlos F. Barbas

Carlos F. Barbas has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 6395275
    Abstract: The present invention describes synthetic human monoclonal antibodies that immunoreact with and neutralize human immunodeficiency virus (HIV). The synthetic monoclonal antibodies of this invention exhibit enhanced binding affinity and neutralization ability to gp120. Also disclosed are immunotherapeutic and diagnostic methods of using the monoclonal antibodies, as well as cell lines for producing the monoclonal antibodies.
    Type: Grant
    Filed: July 6, 2000
    Date of Patent: May 28, 2002
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, Dennis R. Burton, Richard A. Lerner
  • Publication number: 20020058804
    Abstract: The present invention provides a compound that includes an active therapeutic agent attached to a blocking moiety that is sensitive to the catalytic action of molecules having retro-aldol and retro-Michael catalytic activity, methods for making such compounds and methods of converting such compounds to active therapeutic agents using molecules having aldolase activity.
    Type: Application
    Filed: June 18, 2001
    Publication date: May 16, 2002
    Applicant: The Scripps Research Institute
    Inventors: Carlos F. Barbas, Doron Shabat, Christoph Rader, Benjamin List, Richard A. Lerner
  • Patent number: 6368839
    Abstract: Antibodies that catalyze the aldol reaction are generated by immunization with a reactive compound that covalently traps a Lysine (Lys) residue in the binding pocket of the antibody by formation of a stable vinylogous amide, i.e., a covalent antibody/hapten complex. The resultant catalytic antibodies employ a catalytic mechanism which mimics the catalytic mechanism employed by natural class I aldolase enzymes.
    Type: Grant
    Filed: November 16, 1999
    Date of Patent: April 9, 2002
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, III, Richard A. Lerner, Juergen Wagner
  • Patent number: 6346249
    Abstract: The invention is directed to methods of reducing the effects of cancer in a subject by administering to said subject a pharmaceutically effective amount of an anti-cancer agent conjugated to an inmmunoglobulin product which comprises one or more novel complementarity determining region and framework regions.
    Type: Grant
    Filed: April 4, 2000
    Date of Patent: February 12, 2002
    Assignees: Ludwig Institute for Cancer Research, The Scripps Research Institute
    Inventors: Carlos F. Barbas, III, Christoph Rader, Gerd Ritter, Sydney Welt, Lloyd J. Old
  • Patent number: 6342587
    Abstract: The invention is directed to novel CDRs and immunoglobulin products that bind to A33 antigens and methods for their use. The invention also involves a method for making humanized antibodies, using a rabbit as a host animal, and phage display library methodologies, and the antibodies themselves. The methodology is useful, for example, in generating humanized antibodies against molecules associated with cancer, such as A33, which is associated with colon cancer.
    Type: Grant
    Filed: October 22, 1999
    Date of Patent: January 29, 2002
    Assignees: Ludwig Institute for Cancer Research, The Scripps Research Institute
    Inventors: Carlos F. Barbas, III, Christoph Rader, Gerd Ritter, Sydney Welt, Lloyd J. Old
  • Patent number: 6326176
    Abstract: Catalytic antibodies, including 38C2 and 33F12, are capable of efficiently catalyzing a wide variety of ketone-ketone, ketone-aldehyde, aldehyde-ketone, and aldehyde-aldehyde intermolecular aldol reactions, and in some cases to catalyze their subsequent dehydration to yield aldol condensation products. A number of intramolecular aldol reactions have also been defined. Catalysis of all intramolecular aldol reactions examined yields the corresponding condensation products.
    Type: Grant
    Filed: May 18, 2000
    Date of Patent: December 4, 2001
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, Richard A. Lerner, Guofu Zhong, Benjamin List
  • Patent number: 6309881
    Abstract: Nine efficient aldolase antibodies were generated using hapten 2. This hapten combines, in a single molecule, structural components employed for reactive immunization with structural components employed for forming a transition state analog of the aldol reaction. Characterization of two of these antibodies reveals that they are highly proficient (up to 1000-fold better than any other antibody catalyst) and enantioselective catalysts for aldol and retro-aldol reactions and exhibit enantio- and diastereo-selectivities opposite that of antibody 38C2.
    Type: Grant
    Filed: April 2, 2001
    Date of Patent: October 30, 2001
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, Richard A. Lerner, Guofu Zhong
  • Patent number: 6294374
    Abstract: Three monoclonal aldolase antibodies, generated against a &bgr;-diketone hapten by reactive immunization, catalyzed rapid and highly enantioselective retro-aldol reactions providing ent-9a-k by kinetic resolution. Compounds 9a, 9g and 9k were resolved in multi-gram quantities using 0.005-0.0004 mol % antibody catalyst. Enantiomerically pure starting materials, 9a-k, are useful synthons for the construction of epothilones A-E (2-6) and their analogs including 13-alkyl derivatives. Previously, the use of compound 9a as a synthon was reported in the preparation of epothilones A-D, 2-5. To further expand this synthon-based strategy, syntheses of epothilone E, 6, 13-methyl epothilone C, 7, and their trans-isomers have been achieved starting from enantiomerically pure thiazole aldols 9g and 9a, respectively, prepared by large-scale antibody catalyzed resolutions.
    Type: Grant
    Filed: October 8, 1999
    Date of Patent: September 25, 2001
    Assignee: The Scripps Research Institute
    Inventors: Subhash C. Sinha, Richard A. Lerner, Carlos F. Barbas, III
  • Publication number: 20010018201
    Abstract: Nine efficient aldolase antibodies were generated using hapten 2. This hapten combines, in a single molecule, structural components employed for reactive immunization with structural components employed for forming a transition state analog of the aldol reaction. Characterization of two of these antibodies reveals that they are highly proficient (up to 1000-fold better than any other antibody catalyst) and enantioselective catalysts for aldol and retro-aldol reactions and exhibit enantio- and diastereo-selectivities opposite that of antibody 38C2.
    Type: Application
    Filed: April 2, 2001
    Publication date: August 30, 2001
    Inventors: Carlos F. Barbas, Richard A. Lerner, Guofu Zhong
  • Patent number: 6268488
    Abstract: The present invention provides a compound that includes an active therapeutic agent attached to a blocking moiety that is sensitive to the catalytic action of molecules having retro-aldol and retro-Michael catalytic activity, methods for making such compounds and methods of converting such compounds to active therapeutic agents using molecules having aldolase activity.
    Type: Grant
    Filed: May 25, 1999
    Date of Patent: July 31, 2001
    Inventors: Carlos F. Barbas, III, Doron Shabat, Christoph Rader, Benjamin List, Richard A. Lerner
  • Patent number: 6261558
    Abstract: The present invention describes synthetic human monoclonal antibodies that immunoreact with and neutralize human immunodeficiency virus (HIV). The synthetic monoclonal antibodies of this invention exhibit enhanced binding affinity and neutralization ability to gp120. Also disclosed are immunotherapeutic and diagnostic methods of using the monoclonal antibodies, as well as cell lines for producing the monoclonal antibodies.
    Type: Grant
    Filed: February 20, 1996
    Date of Patent: July 17, 2001
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, Dennis R. Burton, Richard A. Lerner
  • Patent number: 6242568
    Abstract: The present invention provides zinc finger nucleotide binding polypeptide variants that have at least two zinc finger modules that bind to a target cellular nucleotide sequence and modulate the transcriptional function of the cellular nucleotide sequence. Also provided are methods of use of such zinc finger nucleotide binding polypeptide variants and methods for isolating the same using expression libraries encoding the polypeptide variants containing randomized substitutions of amino acids. Exemplary zinc finger nucleotide binding polypeptide variants of the invention include two cysteines and two histidines whereby both cysteines are amino proximal to both histidines.
    Type: Grant
    Filed: December 30, 1996
    Date of Patent: June 5, 2001
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, III, Joel M. Gottesfeld, Peter E. Wright
  • Patent number: 6210938
    Abstract: Nine efficient aldolase antibodies were generated using hapten 2. This hapten combines, in a single molecule, structural components employed for reactive immunization with structural components employed for forming a transition state analog of the aldol reaction. Characterization of two of these antibodies reveals that they are highly proficient (up to 1000-fold better than any other antibody catalyst) and enantioselective catalysts for aldol and retro-aldol reactions and exhibit enantio- and diastereo- selectivities opposite that of antibody 38C2.
    Type: Grant
    Filed: December 9, 1999
    Date of Patent: April 3, 2001
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, Richard A. Lerner, Guofu Zhong
  • Patent number: 6175001
    Abstract: Modified pyrimidine nucleotides derivatized at C5 to contain a functional group that mimics the property of a naturally occurring amino acid residues are provided. DNA molecules containing the modified nucleotides are also provided.
    Type: Grant
    Filed: October 16, 1998
    Date of Patent: January 16, 2001
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, Sakthiel Kandasamy
  • Patent number: 6140081
    Abstract: Zinc finger-nucleotide binding polypeptides having binding specificity for target nucleotides containing one or GNN triplets are provided. Compositions containing such polypeptides and the use of such polypeptides and compositions for regulating nucleotide function are also provided.
    Type: Grant
    Filed: October 16, 1998
    Date of Patent: October 31, 2000
    Assignee: The Scripps Research Institute
    Inventor: Carlos F. Barbas
  • Patent number: 6140466
    Abstract: Zinc finger proteins of the Cys.sub.2 His.sub.2 type represent a class of malleable DNA binding proteins which may be selected to bind diverse sequences. Typically, zinc finger proteins containing three zinc finger domains, like the murine transcription factor Zif268 and the human transcription factor Sp1, bind nine contiguous base pairs (bp). To create a class of proteins which would be generally applicable to target unique sites within complex genomes, the present invention provides a polypeptide linker that fuses two three-finger proteins. Two six-fingered proteins were created and demonstrated to bind 18 contiguous bp of DNA in a sequence specific fashion. Expression of these proteins as fusions to activation or repression domains allows transcription to be specifically up or down modulated within cells. Polydactyl zinc finger proteins are broadly applicable as genome-specific transcriptional switches in gene therapy strategies and the development of novel transgenic plants and animals.
    Type: Grant
    Filed: May 27, 1997
    Date of Patent: October 31, 2000
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, III, Joel M. Gottesfeld, Peter E. Wright
  • Patent number: 6110462
    Abstract: The present invention discloses catalytic or enzymatic DNA molecules that contain a modified nucleotide and that are capable of cleaving nucleic acid sequences or molecules, particularly RNA, in a site-specific manner, as well as compositions including same. Methods of making and using the disclosed enzymes and compositions are also disclosed.
    Type: Grant
    Filed: March 3, 1999
    Date of Patent: August 29, 2000
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, Gerald Joyce, Stephen W. Santoro, Sakthivel Kandasamy
  • Patent number: 6096551
    Abstract: The present invention describes methods for producing antibody libraries, and particularly for increasing antibody library diversity by inducing mutagenesis within the CDR regions of immunoglobulin heavy or light chains that are displayed on the surface of filamentous phage particles comprising the library. The invention also describes oligonucleotides useful for increasing the library diversity, and universal light chains useful in the library production methods.
    Type: Grant
    Filed: September 16, 1997
    Date of Patent: August 1, 2000
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, Dennis R. Burton, Richard A. Lerner
  • Patent number: 5985626
    Abstract: Antibodies that catalyze the aldol reaction are generated by immunization with a reactive compound that covalently traps a Lysine (Lys) residue in the binding pocket of the antibody by formation of a stable vinylogous amide, i.e., a covalent antibody/hapten complex. The resultant catalytic antibodies employ a catalytic mechanism which mimics the catalytic mechanism employed by natural class I aldolase enzymes.
    Type: Grant
    Filed: March 31, 1998
    Date of Patent: November 16, 1999
    Assignee: The Scripps Research Institute
    Inventors: Carlos F. Barbas, III, Richard A. Lerner, Juergen Wagner
  • Patent number: 5804440
    Abstract: The present invention describes human monoclonal antibodies which immunoreact with and neutralize human immunodeficiency virus (HIV). Also disclosed are immunotherapeutic and diagnostic methods of using the monoclonal antibodies, as well as cell line for producing the monoclonal antibodies.
    Type: Grant
    Filed: July 24, 1997
    Date of Patent: September 8, 1998
    Assignee: The Scripps Research Institute
    Inventors: Dennis R. Burton, Carlos F. Barbas, Richard A. Lerner