Patents by Inventor Carly Farris

Carly Farris has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20250121037
    Abstract: Inert matrices for use with ?-synuclein seed amplification assays (“?S-SAA” s) are provided. The inert matrices accurately reflect the absence of misfolded ?S protein when used as a negative control, in the form of no, perceptively low, or delayed ?S substrate self-aggregation, yet will readily permit aggregation of the ?S substrate with seeds when used as a positive control. The inert matrices may be used to screen for ?S-SAA reagent competence. The inert matrices may be used to dilute samples taken from peripheral biological matrices. Finally, the inert matrices may be used as a diluent for serial dilutions of ?S-SAA samples, to enable semi-quantitative versions of ?S-SAAs.
    Type: Application
    Filed: December 20, 2024
    Publication date: April 17, 2025
    Applicant: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Yihua Ma, Hieu Huu Nguyen
  • Patent number: 12220445
    Abstract: Inert matrices for use with ?-synuclein seed amplification assays (?S-SAAs) are provided. The inert matrices accurately reflect the absence of misfolded ?S protein when used as a negative control, in the form of no, perceptively low, or delayed ?S substrate self-aggregation, yet will readily permit aggregation of the ?S substrate with seeds when used as a positive control. The inert matrices may be used to screen for ?S-SAA reagent competence. The inert matrices may be used to dilute samples taken from peripheral biological matrices. Finally, the inert matrices may be used as a diluent for serial dilutions of ?S-SAA samples, to enable semi-quantitative versions of ?S-SAAs.
    Type: Grant
    Filed: September 9, 2022
    Date of Patent: February 11, 2025
    Assignee: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Yihua Ma, Hieu Huu Nguyen
  • Publication number: 20240228560
    Abstract: An expression vector is provided for production of human alpha-synuclein (?S) protein or a conservative variant thereof that exhibits a decreased tendency to self-aggregate in an ?S seed amplification assay (SAA). The expression vector comprises a nucleic acid sequence coding for human ?S protein or a conservative variant, the nucleic acid sequence comprising codons that have been optimized to produce human ?S protein or a conservative variant when expressed by a host cell such as E. Coli. The codons have been optimized to avoid amino acid misincorporation in the expressed protein. Methods for purification of the expressed protein are also provided.
    Type: Application
    Filed: March 26, 2024
    Publication date: July 11, 2024
    Applicant: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Bret Holguin, Yihua Ma
  • Publication number: 20240210424
    Abstract: A method is provided for determining the presence of soluble, misfolded ?-synuclein protein in a biological sample. The method comprises contacting the biological sample with a pre-incubation mixture, the pre-incubation mixture comprising: a monomeric ?-synuclein protein; a buffer composition; a salt; and an indicator, to form an incubation mixture. An incubation cycle is conducted on the incubation mixture in the presence of either a silicon nitride bead or a borosilicate glass bead having a diameter of from about 1 mm to about 5 mm. The method further comprises determining if a detectable amount of misfolded ?-synuclein aggregate is present in the biological sample.
    Type: Application
    Filed: March 5, 2024
    Publication date: June 27, 2024
    Applicant: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Bret Holguin, Russell Lebovitz, Benedikt Vollrath, Frank Espin
  • Patent number: 11970520
    Abstract: An expression vector is provided for production of human alpha-synuclein (?S) protein or a conservative variant thereof that exhibits a decreased tendency to self-aggregate in an ?S seed amplification assay (SAA). The expression vector comprises a nucleic acid sequence coding for human ?S protein or a conservative variant, the nucleic acid sequence comprising codons that have been optimized to produce human ?S protein or a conservative variant when expressed by a host cell such as E. coli. The codons have been optimized to avoid amino acid misincorporation in the expressed protein. Methods for purification of the expressed protein are also provided.
    Type: Grant
    Filed: January 19, 2022
    Date of Patent: April 30, 2024
    Assignee: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Bret Holguin, Yihua Ma
  • Patent number: 11959927
    Abstract: A method is provided for determining the presence of soluble, misfolded ?-synuclein protein in a biological sample. The method comprises contacting the biological sample with a pre-incubation mixture, the pre-incubation mixture comprising: a monomeric ?-synuclein protein; a buffer composition; a salt; and an indicator, to form an incubation mixture. An incubation cycle is conducted on the incubation mixture in the presence of either a silicon nitride bead or a borosilicate glass bead having a diameter of from about 1 mm to about 5 mm. The method further comprises determining if a detectable amount of misfolded ?-synuclein aggregate is present in the biological sample.
    Type: Grant
    Filed: June 14, 2021
    Date of Patent: April 16, 2024
    Assignee: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Bret Holguin, Russell Lebovitz, Benedikt Vollrath, Frank Espin
  • Publication number: 20240085435
    Abstract: Methods and kits are provided for reproducible detection of misfolded aS aggregates in biological fluids and tissue that are less-invasively or non-invasively obtained compared to cerebrospinal fluid, such as skin, olfactory mucosa, saliva, and blood or blood parts.
    Type: Application
    Filed: September 11, 2023
    Publication date: March 14, 2024
    Applicant: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Yihua Ma
  • Publication number: 20230084155
    Abstract: Inert matrices for use with a-synuclein seed amplification assays (“?S-SAA”s) are provided. The inert matrices accurately reflect the absence of misfolded ?S protein when used as a negative control, in the form of no, perceptively low, or delayed ?S substrate self-aggregation, yet will readily permit aggregation of the ?S substrate with seeds when used as a positive control. The inert matrices may be used to screen for ?S-SAA reagent competence. The inert matrices may be used to dilute samples taken from peripheral biological matrices. Finally, the inert matrices may be used as a diluent for serial dilutions of ?S-SAA samples, to enable semi-quantitative versions of ?S-SAAs.
    Type: Application
    Filed: September 9, 2022
    Publication date: March 16, 2023
    Applicant: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Yihua Ma, Hieu Huu Nguyen
  • Publication number: 20220135632
    Abstract: An expression vector is provided for production of human alpha-synuclein (?S) protein or a conservative variant thereof that exhibits a decreased tendency to self-aggregate in an ?S seed amplification assay (SAA). The expression vector comprises a nucleic acid sequence coding for human ?S protein or a conservative variant, the nucleic acid sequence comprising codons that have been optimized to produce human ?S protein or a conservative variant when expressed by a host cell such as E. Coli. The codons have been optimized to avoid amino acid misincorporation in the expressed protein. Methods for purification of the expressed protein are also provided.
    Type: Application
    Filed: January 19, 2022
    Publication date: May 5, 2022
    Applicant: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Bret Holguin, Yihua Ma
  • Patent number: 11254718
    Abstract: An expression vector is provided for production of human alpha-synuclein (?S) protein or a conservative variant thereof that exhibits a decreased tendency to self-aggregate in an ?S seed amplification assay (SAA). The expression vector comprises a nucleic acid sequence coding for human ?S protein or a conservative variant, the nucleic acid sequence comprising codons that have been optimized to produce human ?S protein or a conservative variant when expressed by a host cell such as E. coli. The codons have been optimized to avoid amino acid misincorporation in the expressed protein. Methods for purification of the expressed protein are also provided.
    Type: Grant
    Filed: May 18, 2021
    Date of Patent: February 22, 2022
    Assignee: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Bret Holguin, Yihua Ma
  • Publication number: 20210311077
    Abstract: A method is provided for determining the presence of soluble, misfolded ?-synuclein protein in a biological sample. The method comprises contacting the biological sample with a pre-incubation mixture, the pre-incubation mixture comprising: a monomeric ?-synuclein protein; a buffer composition; a salt; and an indicator, to form an incubation mixture. An incubation cycle is conducted on the incubation mixture in the presence of either a silicon nitride bead or a borosilicate glass bead having a diameter of from about 1 mm to about 5 mm. The method further comprises determining if a detectable amount of misfolded ?-synuclein aggregate is present in the biological sample.
    Type: Application
    Filed: June 14, 2021
    Publication date: October 7, 2021
    Applicant: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Bret Holguin, Russell Lebovitz, Benedikt Vollrath, Frank Espin
  • Publication number: 20210277076
    Abstract: An expression vector is provided for production of human alpha-synuclein (?S) protein or a conservative variant thereof that exhibits a decreased tendency to self-aggregate in an ?S seed amplification assay (SAA). The expression vector comprises a nucleic acid sequence coding for human ?S protein or a conservative variant, the nucleic acid sequence comprising codons that have been optimized to produce human ?S protein or a conservative variant when expressed by a host cell such as E. coli. The codons have been optimized to avoid amino acid misincorporation in the expressed protein. Methods for purification of the expressed protein are also provided.
    Type: Application
    Filed: May 18, 2021
    Publication date: September 9, 2021
    Applicant: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Bret Holguin, Yihua Ma
  • Patent number: 11079396
    Abstract: A method is provided for determining the presence of soluble, misfolded ?-synuclein protein in a biological sample. The method comprises contacting the biological sample with a pre-incubation mixture, the pre-incubation mixture comprising: a monomeric ?-synuclein protein; a buffer composition; a salt; and an indicator, to form an incubation mixture. An incubation cycle is conducted on the incubation mixture in the presence of either a silicon nitride bead or a borosilicate glass bead having a diameter of from about 1 mm to about 5 mm. The method further comprises determining if a detectable amount of misfolded ?-synuclein aggregate is present in the biological sample.
    Type: Grant
    Filed: September 3, 2020
    Date of Patent: August 3, 2021
    Assignee: Amprion, Inc.
    Inventors: Luis Concha, Carly Farris, Bret Holguin, Russell Lebovitz, Benedikt Vollrath, Frank Espin
  • Publication number: 20210063416
    Abstract: A method is provided for determining the presence of soluble, misfolded ?-synuclein protein in a biological sample. The method comprises contacting the biological sample with a pre-incubation mixture, the pre-incubation mixture comprising: a monomeric ?-synuclein protein; a buffer composition; a salt; and an indicator, to form an incubation mixture. An incubation cycle is conducted on the incubation mixture in the presence of either a silicon nitride bead or a borosilicate glass bead having a diameter of from about 1 mm to about 5 mm. The method further comprises determining if a detectable amount of misfolded ?-synuclein aggregate is present in the biological sample.
    Type: Application
    Filed: September 3, 2020
    Publication date: March 4, 2021
    Inventors: Luis Concha, Carly Farris, Bret Holguin, Russell Lebovitz, Benedikt Vollrath, Frank Espin