Patents by Inventor Carly Farris
Carly Farris has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Publication number: 20250121037Abstract: Inert matrices for use with ?-synuclein seed amplification assays (“?S-SAA” s) are provided. The inert matrices accurately reflect the absence of misfolded ?S protein when used as a negative control, in the form of no, perceptively low, or delayed ?S substrate self-aggregation, yet will readily permit aggregation of the ?S substrate with seeds when used as a positive control. The inert matrices may be used to screen for ?S-SAA reagent competence. The inert matrices may be used to dilute samples taken from peripheral biological matrices. Finally, the inert matrices may be used as a diluent for serial dilutions of ?S-SAA samples, to enable semi-quantitative versions of ?S-SAAs.Type: ApplicationFiled: December 20, 2024Publication date: April 17, 2025Applicant: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Yihua Ma, Hieu Huu Nguyen
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Patent number: 12220445Abstract: Inert matrices for use with ?-synuclein seed amplification assays (?S-SAAs) are provided. The inert matrices accurately reflect the absence of misfolded ?S protein when used as a negative control, in the form of no, perceptively low, or delayed ?S substrate self-aggregation, yet will readily permit aggregation of the ?S substrate with seeds when used as a positive control. The inert matrices may be used to screen for ?S-SAA reagent competence. The inert matrices may be used to dilute samples taken from peripheral biological matrices. Finally, the inert matrices may be used as a diluent for serial dilutions of ?S-SAA samples, to enable semi-quantitative versions of ?S-SAAs.Type: GrantFiled: September 9, 2022Date of Patent: February 11, 2025Assignee: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Yihua Ma, Hieu Huu Nguyen
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Publication number: 20240228560Abstract: An expression vector is provided for production of human alpha-synuclein (?S) protein or a conservative variant thereof that exhibits a decreased tendency to self-aggregate in an ?S seed amplification assay (SAA). The expression vector comprises a nucleic acid sequence coding for human ?S protein or a conservative variant, the nucleic acid sequence comprising codons that have been optimized to produce human ?S protein or a conservative variant when expressed by a host cell such as E. Coli. The codons have been optimized to avoid amino acid misincorporation in the expressed protein. Methods for purification of the expressed protein are also provided.Type: ApplicationFiled: March 26, 2024Publication date: July 11, 2024Applicant: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Bret Holguin, Yihua Ma
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Publication number: 20240210424Abstract: A method is provided for determining the presence of soluble, misfolded ?-synuclein protein in a biological sample. The method comprises contacting the biological sample with a pre-incubation mixture, the pre-incubation mixture comprising: a monomeric ?-synuclein protein; a buffer composition; a salt; and an indicator, to form an incubation mixture. An incubation cycle is conducted on the incubation mixture in the presence of either a silicon nitride bead or a borosilicate glass bead having a diameter of from about 1 mm to about 5 mm. The method further comprises determining if a detectable amount of misfolded ?-synuclein aggregate is present in the biological sample.Type: ApplicationFiled: March 5, 2024Publication date: June 27, 2024Applicant: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Bret Holguin, Russell Lebovitz, Benedikt Vollrath, Frank Espin
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Patent number: 11970520Abstract: An expression vector is provided for production of human alpha-synuclein (?S) protein or a conservative variant thereof that exhibits a decreased tendency to self-aggregate in an ?S seed amplification assay (SAA). The expression vector comprises a nucleic acid sequence coding for human ?S protein or a conservative variant, the nucleic acid sequence comprising codons that have been optimized to produce human ?S protein or a conservative variant when expressed by a host cell such as E. coli. The codons have been optimized to avoid amino acid misincorporation in the expressed protein. Methods for purification of the expressed protein are also provided.Type: GrantFiled: January 19, 2022Date of Patent: April 30, 2024Assignee: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Bret Holguin, Yihua Ma
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Patent number: 11959927Abstract: A method is provided for determining the presence of soluble, misfolded ?-synuclein protein in a biological sample. The method comprises contacting the biological sample with a pre-incubation mixture, the pre-incubation mixture comprising: a monomeric ?-synuclein protein; a buffer composition; a salt; and an indicator, to form an incubation mixture. An incubation cycle is conducted on the incubation mixture in the presence of either a silicon nitride bead or a borosilicate glass bead having a diameter of from about 1 mm to about 5 mm. The method further comprises determining if a detectable amount of misfolded ?-synuclein aggregate is present in the biological sample.Type: GrantFiled: June 14, 2021Date of Patent: April 16, 2024Assignee: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Bret Holguin, Russell Lebovitz, Benedikt Vollrath, Frank Espin
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Publication number: 20240085435Abstract: Methods and kits are provided for reproducible detection of misfolded aS aggregates in biological fluids and tissue that are less-invasively or non-invasively obtained compared to cerebrospinal fluid, such as skin, olfactory mucosa, saliva, and blood or blood parts.Type: ApplicationFiled: September 11, 2023Publication date: March 14, 2024Applicant: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Yihua Ma
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Publication number: 20230084155Abstract: Inert matrices for use with a-synuclein seed amplification assays (“?S-SAA”s) are provided. The inert matrices accurately reflect the absence of misfolded ?S protein when used as a negative control, in the form of no, perceptively low, or delayed ?S substrate self-aggregation, yet will readily permit aggregation of the ?S substrate with seeds when used as a positive control. The inert matrices may be used to screen for ?S-SAA reagent competence. The inert matrices may be used to dilute samples taken from peripheral biological matrices. Finally, the inert matrices may be used as a diluent for serial dilutions of ?S-SAA samples, to enable semi-quantitative versions of ?S-SAAs.Type: ApplicationFiled: September 9, 2022Publication date: March 16, 2023Applicant: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Yihua Ma, Hieu Huu Nguyen
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Publication number: 20220135632Abstract: An expression vector is provided for production of human alpha-synuclein (?S) protein or a conservative variant thereof that exhibits a decreased tendency to self-aggregate in an ?S seed amplification assay (SAA). The expression vector comprises a nucleic acid sequence coding for human ?S protein or a conservative variant, the nucleic acid sequence comprising codons that have been optimized to produce human ?S protein or a conservative variant when expressed by a host cell such as E. Coli. The codons have been optimized to avoid amino acid misincorporation in the expressed protein. Methods for purification of the expressed protein are also provided.Type: ApplicationFiled: January 19, 2022Publication date: May 5, 2022Applicant: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Bret Holguin, Yihua Ma
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Patent number: 11254718Abstract: An expression vector is provided for production of human alpha-synuclein (?S) protein or a conservative variant thereof that exhibits a decreased tendency to self-aggregate in an ?S seed amplification assay (SAA). The expression vector comprises a nucleic acid sequence coding for human ?S protein or a conservative variant, the nucleic acid sequence comprising codons that have been optimized to produce human ?S protein or a conservative variant when expressed by a host cell such as E. coli. The codons have been optimized to avoid amino acid misincorporation in the expressed protein. Methods for purification of the expressed protein are also provided.Type: GrantFiled: May 18, 2021Date of Patent: February 22, 2022Assignee: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Bret Holguin, Yihua Ma
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Publication number: 20210311077Abstract: A method is provided for determining the presence of soluble, misfolded ?-synuclein protein in a biological sample. The method comprises contacting the biological sample with a pre-incubation mixture, the pre-incubation mixture comprising: a monomeric ?-synuclein protein; a buffer composition; a salt; and an indicator, to form an incubation mixture. An incubation cycle is conducted on the incubation mixture in the presence of either a silicon nitride bead or a borosilicate glass bead having a diameter of from about 1 mm to about 5 mm. The method further comprises determining if a detectable amount of misfolded ?-synuclein aggregate is present in the biological sample.Type: ApplicationFiled: June 14, 2021Publication date: October 7, 2021Applicant: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Bret Holguin, Russell Lebovitz, Benedikt Vollrath, Frank Espin
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Publication number: 20210277076Abstract: An expression vector is provided for production of human alpha-synuclein (?S) protein or a conservative variant thereof that exhibits a decreased tendency to self-aggregate in an ?S seed amplification assay (SAA). The expression vector comprises a nucleic acid sequence coding for human ?S protein or a conservative variant, the nucleic acid sequence comprising codons that have been optimized to produce human ?S protein or a conservative variant when expressed by a host cell such as E. coli. The codons have been optimized to avoid amino acid misincorporation in the expressed protein. Methods for purification of the expressed protein are also provided.Type: ApplicationFiled: May 18, 2021Publication date: September 9, 2021Applicant: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Bret Holguin, Yihua Ma
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Patent number: 11079396Abstract: A method is provided for determining the presence of soluble, misfolded ?-synuclein protein in a biological sample. The method comprises contacting the biological sample with a pre-incubation mixture, the pre-incubation mixture comprising: a monomeric ?-synuclein protein; a buffer composition; a salt; and an indicator, to form an incubation mixture. An incubation cycle is conducted on the incubation mixture in the presence of either a silicon nitride bead or a borosilicate glass bead having a diameter of from about 1 mm to about 5 mm. The method further comprises determining if a detectable amount of misfolded ?-synuclein aggregate is present in the biological sample.Type: GrantFiled: September 3, 2020Date of Patent: August 3, 2021Assignee: Amprion, Inc.Inventors: Luis Concha, Carly Farris, Bret Holguin, Russell Lebovitz, Benedikt Vollrath, Frank Espin
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Publication number: 20210063416Abstract: A method is provided for determining the presence of soluble, misfolded ?-synuclein protein in a biological sample. The method comprises contacting the biological sample with a pre-incubation mixture, the pre-incubation mixture comprising: a monomeric ?-synuclein protein; a buffer composition; a salt; and an indicator, to form an incubation mixture. An incubation cycle is conducted on the incubation mixture in the presence of either a silicon nitride bead or a borosilicate glass bead having a diameter of from about 1 mm to about 5 mm. The method further comprises determining if a detectable amount of misfolded ?-synuclein aggregate is present in the biological sample.Type: ApplicationFiled: September 3, 2020Publication date: March 4, 2021Inventors: Luis Concha, Carly Farris, Bret Holguin, Russell Lebovitz, Benedikt Vollrath, Frank Espin