Patents by Inventor Catherine Pachuk

Catherine Pachuk has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20160083723
    Abstract: Described herein are methods for identifying nucleic acid sequences that modulate the function of a cell, the expression of a gene in a cell, or the biological activity of a target polypeptide in a cell. The methods involve the use of double stranded RNA expression libraries, double stranded RNA molecules, and post-transcriptional gene silencing techniques.
    Type: Application
    Filed: June 29, 2015
    Publication date: March 24, 2016
    Applicant: ALNYLAM PHARMACEUTICALS, INC.
    Inventors: Tony GIORDANO, Catherine PACHUK, Chandrasekhar SATISHCHANDRAN
  • Patent number: 9198927
    Abstract: The invention relates to methods and compositions for modulating viral replication through double-stranded RNA-mediated gene silencing (RNAi), wherein the antiviral methods and compositions preferentially target opposite strand replication intermediates of single-stranded RNA viruses.
    Type: Grant
    Filed: March 1, 2010
    Date of Patent: December 1, 2015
    Assignee: ALNYLAM PHARMACEUTICALS, INC.
    Inventors: Daniel E. McCallus, Catherine Pachuk, Baohua Gu
  • Publication number: 20150315593
    Abstract: The present invention provides agents, compositions, constructs and methods for silencing HCV polynucleotides, as well as methods and compositions for treating or preventing HCV infection in a mammalian cell. In one aspect, the present invention provides an agent or composition comprising at least one double-stranded RNA effector molecule or complex. The double-stranded RNA effector molecule or complex comprises: (1) a sequence of at least 19 nucleotides having at least 90% identity with a nucleotide sequence within HCV Conserved Region 1 (SEQ ID NO: 2), HCV Conserved Region 2 (SEQ ID NO: 3), HCV Conserved Region 5 (SEQ ID NO: 4), (ATR)-1 (SEQ ID NO: 86), ATR-2 (SEQ ID NO: 87), ATR-3 (SEQ ID NO: 88), ATR-4 (SEQ ID NO: 89); and (2) its complementary sequence. In another aspect, the present invention provides a construct suitable for replication in a host cell, and/or suitable for expression of an RNA molecule or complex of the invention in vitro or in vivo.
    Type: Application
    Filed: February 13, 2015
    Publication date: November 5, 2015
    Inventors: Daniel McCallus, Catherine Pachuk
  • Publication number: 20150297625
    Abstract: The invention encompasses methods of delivering nucleic acids, including dsRNA, to mammalian target cells in vivo via intercellular transfer, wherein the dsRNA is delivered to or expressed in a first cell different from the target cell, wherein the first cell facilitates delivery of the dsRNA to the target cell.
    Type: Application
    Filed: May 1, 2013
    Publication date: October 22, 2015
    Inventor: Catherine PACHUK
  • Publication number: 20150232930
    Abstract: Described herein are methods for identifying nucleic acid sequences that modulate the function of a cell, the expression of a gene in a cell, or the biological activity of a target polypeptide in a cell. The methods involve the use of double stranded RNA expression libraries, double stranded RNA molecules, and post-transcriptional gene silencing techniques.
    Type: Application
    Filed: May 6, 2015
    Publication date: August 20, 2015
    Applicant: ALNYLAM PHARMACEUTICALS, INC.
    Inventors: Tony GIORDANO, Catherine PACHUK, Chandrasekhar SATISHCHANDRAN
  • Patent number: 9051566
    Abstract: Described herein are methods for identifying nucleic acid sequences that modulate the function of a cell, the expression of a gene in a cell, or the biological activity of a target polypeptide in a cell. The methods involve the use of double stranded RNA expression libraries, double stranded RNA molecules, and post-transcriptional gene silencing techniques.
    Type: Grant
    Filed: January 22, 2004
    Date of Patent: June 9, 2015
    Assignee: ALNYLAM PHARMACEUTICALS, INC.
    Inventors: Tony Giordano, Catherine Pachuk, Chandrasekhar Satishchandran
  • Patent number: 8987227
    Abstract: The present invention provides agents, compositions, constructs and methods for silencing HCV polynucleotides, as well as methods and compositions for treating or preventing HCV infection in a mammalian cell. In one aspect, the present invention provides an agent or composition comprising at least one double-stranded RNA effector molecule or complex. The double-stranded RNA effector molecule or complex comprises: (1) a sequence of at least 19 nucleotides having at least 90% identity with a nucleotide sequence within HCV Conserved Region 1 (SEQ ID NO: 2), HCV Conserved Region 2 (SEQ ID NO: 3), HCV Conserved Region 5 (SEQ ID NO: 4), (ATR)-1 (SEQ ID NO: 86), ATR-2 (SEQ ID NO: 87), ATR-3 (SEQ ID NO: 88), ATR-4 (SEQ ID NO: 89); and (2) its complementary sequence. In another aspect, the present invention provides a construct suitable for replication in a host cell, and/or suitable for expression of an RNA molecule or complex of the invention in vitro or in vivo.
    Type: Grant
    Filed: November 14, 2013
    Date of Patent: March 24, 2015
    Assignee: Alnylam Pharmaceuticals, Inc.
    Inventors: Daniel McCallus, Catherine Pachuk
  • Publication number: 20140349390
    Abstract: The invention encompasses methods of delivering nucleic acids, including dsRNA, to mammalian target cells in vivo via intercellular transfer, wherein the dsRNA is delivered to or expressed in a first cell different from the target cell, wherein the first cell facilitates delivery of the dsRNA to the target cell.
    Type: Application
    Filed: August 1, 2014
    Publication date: November 27, 2014
    Inventor: Catherine Pachuk
  • Publication number: 20140348882
    Abstract: The invention encompasses methods of delivering nucleic acids, including dsRNA, to mammalian target cells in vivo via intercellular transfer, wherein the dsRNA is delivered to or expressed in a first cell different from the target cell, wherein the first cell facilitates delivery of the dsRNA to the target cell.
    Type: Application
    Filed: August 1, 2014
    Publication date: November 27, 2014
    Inventor: Catherine Pachuk
  • Publication number: 20140141512
    Abstract: The present invention provides agents, compositions, constructs and methods for silencing HCV polynucleotides, as well as methods and compositions for treating or preventing HCV infection in a mammalian cell. In one aspect, the present invention provides an agent or composition comprising at least one double-stranded RNA effector molecule or complex. The double-stranded RNA effector molecule or complex comprises: (1) a sequence of at least 19 nucleotides having at least 90% identity with a nucleotide sequence within HCV Conserved Region 1 (SEQ ID NO: 2), HCV Conserved Region 2 (SEQ ID NO: 3), HCV Conserved Region 5 (SEQ ID NO: 4), (ATR)-1 (SEQ ID NO: 86), ATR-2 (SEQ ID NO: 87), ATR-3 (SEQ ID NO: 88), ATR-4 (SEQ ID NO: 89); and (2) its complementary sequence. In another aspect, the present invention provides a construct suitable for replication in a host cell, and/or suitable for expression of an RNA molecule or complex of the invention in vitro or in vivo.
    Type: Application
    Filed: November 14, 2013
    Publication date: May 22, 2014
    Applicant: ALNYLAM PHARMACEUTICALS, INC.
    Inventors: Daniel McCallus, Catherine Pachuk
  • Publication number: 20130344133
    Abstract: The invention encompasses methods of delivering nucleic acids, including dsRNA, to mammalian target cells in vivo via intercellular transfer, wherein the dsRNA is delivered to or expressed in a first cell different from the target cell, wherein the first cell facilitates delivery of the dsRNA to the target cell.
    Type: Application
    Filed: May 1, 2013
    Publication date: December 26, 2013
    Applicant: Veritas Bio, LLC
    Inventor: Catherine PACHUK
  • Patent number: 8614198
    Abstract: The present invention provides agents, compositions, constructs and methods for silencing HCV polynucleotides, as well as methods and compositions for treating or preventing HCV infection in a mammalian cell. In one aspect, the present invention provides an agent or composition comprising at least one double-stranded RNA effector molecule or complex. The double-stranded RNA effector molecule or complex comprises: (1) a sequence of at least 19 nucleotides having at least 90% identity with a nucleotide sequence within HCV Conserved Region 1 (SEQ ID NO: 2), HCV Conserved Region 2 (SEQ ID NO: 3), HCV Conserved Region 5 (SEQ ID NO: 4), (ATR)-1 (SEQ ID NO: 86), ATR-2 (SEQ ID NO: 87), ATR-3 (SEQ ID NO: 88), ATR-4 (SEQ ID NO: 89); and (2) its complementary sequence. In another aspect, the present invention provides a construct suitable for replication in a host cell, and/or suitable for expression of an RNA molecule or complex of the invention in vitro or in vivo.
    Type: Grant
    Filed: June 23, 2008
    Date of Patent: December 24, 2013
    Assignee: Alnylam Pharmaceuticals, Inc.
    Inventors: Daniel E. McCallus, Catherine Pachuk
  • Patent number: 8524679
    Abstract: The invention encompasses methods of delivering nucleic acids, including dsRNA, to mammalian target cells in vivo via intercellular transfer, wherein the dsRNA is delivered to or expressed in a first cell different from the target cell, wherein the first cell facilitates delivery of the dsRNA to the target cell.
    Type: Grant
    Filed: November 6, 2007
    Date of Patent: September 3, 2013
    Assignee: Veritas Bio, LLC
    Inventor: Catherine Pachuk
  • Publication number: 20100324117
    Abstract: The present invention provides agents, compositions, constructs and methods for silencing HCV polynucleotides, as well as methods and compositions for treating or preventing HCV infection in a mammalian cell. In one aspect, the present invention provides an agent or composition comprising at least one double-stranded RNA effector molecule or complex. The double-stranded RNA effector molecule or complex comprises: (1) a sequence of at least 19 nucleotides having at least 90% identity with a nucleotide sequence within HCV Conserved Region 1 (SEQ ID NO: 2), HCV Conserved Region 2 (SEQ ID NO: 3), HCV Conserved Region 5 (SEQ ID NO: 4), (ATR)-1 (SEQ ID NO: 86), ATR-2 (SEQ ID NO: 87), ATR-3 (SEQ ID NO: 88), ATR-4 (SEQ ID NO: 89); and (2) its complementary sequence. In another aspect, the present invention provides a construct suitable for replication in a host cell, and/or suitable for expression of an RNA molecule or complex of the invention in vitro or in vivo.
    Type: Application
    Filed: June 23, 2008
    Publication date: December 23, 2010
    Applicant: ALNYLAM PHARMACEUTICALS, INC.
    Inventors: Daniel McCallus, Catherine Pachuk
  • Publication number: 20100323001
    Abstract: The invention encompasses methods of delivering nucleic acids, including dsRNA, to mammalian target cells in vivo via intercellular transfer, wherein the dsRNA is delivered to or expressed in a first cell different from the target cell, wherein the first cell facilitates delivery of the dsRNA to the target cell.
    Type: Application
    Filed: November 6, 2007
    Publication date: December 23, 2010
    Applicant: Veritas LLC
    Inventor: Catherine Pachuk
  • Publication number: 20100267805
    Abstract: The invention relates to methods and compositions for modulating viral replication through double-stranded RNA-mediated gene silencing (RNAi), wherein the antiviral methods and compositions preferentially target opposite strand replication intermediates of single-stranded RNA viruses.
    Type: Application
    Filed: March 1, 2010
    Publication date: October 21, 2010
    Applicant: ALNYLAM PHARMACEUTICALS, INC.
    Inventors: Daniel E. McCallus, Catherine Pachuk, Baohua Gu
  • Publication number: 20090311788
    Abstract: Method and constructs for expressing heterologous sequences of interest in eukaryotic cells using multiple-compartment expression systems. These systems, which may be comprised of a single construct or multiple constructs, utilize at least two different promoters which are each active within a different subcellular compartment of the same eukaryotic cell. The system and constructs of the invention are particularly useful for achieving enhanced in vivo expression of RNA molecules capable of modulating the expression of target genes.
    Type: Application
    Filed: October 3, 2008
    Publication date: December 17, 2009
    Inventors: Catherine PACHUK, Chandrasekhar Satishchandran
  • Publication number: 20090137039
    Abstract: The invention relates to methods and compositions for modulating viral replication through double-stranded RNA-mediated gene silencing (RNAi), wherein the antiviral methods and compositions preferentially target opposite strand replication intermediates of single-stranded RNA viruses.
    Type: Application
    Filed: August 29, 2008
    Publication date: May 28, 2009
    Inventors: Daniel E. McCALLUS, Catherine Pachuk, Baohua Gu
  • Publication number: 20080081792
    Abstract: A therapeutic composition for inhibiting the function of a target polynucleotide sequence in a mammalian cell includes an agent that provides to a mammalian cell an at least partially double-stranded RNA molecule comprising a polynucleotide sequence of at least about 200 nucleotides in length, said polynucleotide sequence being substantially homologous to a target polynucleotide sequence. This RNA molecule desirably does not produce a functional protein. The agents useful in the composition can be RNA molecules made by enzymatic synthetic methods or chemical synthetic methods in vitro; or made in recombinant cultures of microorganisms and isolated therefrom, or alternatively, can be capable of generating the desired RNA molecule in vivo after delivery to the mammalian cell.
    Type: Application
    Filed: November 30, 2006
    Publication date: April 3, 2008
    Applicant: Wyeth
    Inventors: Catherine Pachuk, Chandrasekhar Satishchandran
  • Publication number: 20070238178
    Abstract: A therapeutic composition for inhibiting the function of a target polynucleotide sequence in a mammalian cell includes an agent that provides to a mammalian cell an at least partially double-stranded RNA molecule comprising a polynucleotide sequence of at least about 200 nucleotides in length, said polynucleotide sequence being substantially homologous to a target polynucleotide sequence. This RNA molecule desirably does not produce a functional protein. The agents useful in the composition can be RNA molecules made by enzymatic synthetic methods or chemical synthetic methods in vitro; or made in recombinant cultures of microorganisms and isolated therefrom, or alternatively, can be capable of generating the desired RNA molecule in vivo after delivery to the mammalian cell.
    Type: Application
    Filed: November 30, 2006
    Publication date: October 11, 2007
    Applicant: Wyeth
    Inventors: Chandrasekhar Satishchandran, Catherine Pachuk