Abstract: Provided is a method for classification of diseases including receiving image data associated with an image at a first resolution. The image may be processed, for example by removing a background from the image, deconstructing the image into separate layers, and segmenting the image to define a plurality of single-cell images. A single-cell image may be processed, for example, by applying a filter to the single-cell image to decrease a resolution of the single-cell image as compared to the first resolution, to a second resolution. A label may be assigned to the single-cell image. A machine learning model is trained to predict a classification of the single-cell image based on inputting a plurality of single-cell images into the model. The trained machine learning model may be used to predict the outcome of a treatment. Systems and computer program products are also provided.