Patents by Inventor Colin R. South

Colin R. South has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11535829
    Abstract: Disclosed are genetically engineered organisms, such as yeast and bacteria, that have the ability to metabolize atypical phosphorus or sulfur sources. Fermentation methods using the genetically engineered organisms are also described. The fermentation methods are robust processes for the industrial bioproduction of a variety of compounds, including commodities, fine chemicals, an pharmaceuticals.
    Type: Grant
    Filed: November 27, 2018
    Date of Patent: December 27, 2022
    Assignee: Ginkgo Bioworks, Inc.
    Inventors: Arthur J. Shaw, IV, Colin R. South, Johannes P. Van Dijken
  • Publication number: 20210380996
    Abstract: Disclosed are genetically engineered organisms, such as yeast and bacteria, that have the ability to metabolize atypical nitrogen sources, such as melamine and cyanamide. Fermentation methods using the genetically engineered organisms are also described. The methods of the invention are robust processes for the industrial bioproduction of a variety of compounds, including commodities, fine chemicals, and pharmaceuticals.
    Type: Application
    Filed: June 16, 2021
    Publication date: December 9, 2021
    Inventors: Colin R. South, Arthur J. Shaw, IV
  • Patent number: 11041162
    Abstract: Disclosed are genetically engineered organisms, such as yeast and bacteria, that have the ability to metabolize atypical nitrogen sources, such as melamine and cyanamide. Fermentation methods using the genetically engineered organisms are also described. The methods of the invention are robust processes for the industrial bioproduction of a variety of compounds, including commodities, fine chemicals, and pharmaceuticals.
    Type: Grant
    Filed: April 23, 2019
    Date of Patent: June 22, 2021
    Assignee: Ginkgo Bioworks, Inc.
    Inventors: Colin R. South, Arthur J. Shaw, IV
  • Publication number: 20190233800
    Abstract: Disclosed are genetically engineered organisms, such as yeast and bacteria, that have the ability to metabolize atypical phosphorus or sulfur sources. Fermentation methods using the genetically engineered organisms are also described. The fermentation methods are robust processes for the industrial bioproduction of a variety of compounds, including commodities, fine chemicals, and pharmaceuticals.
    Type: Application
    Filed: November 27, 2018
    Publication date: August 1, 2019
    Inventors: Arthur J Shaw, IV, Colin R South, Johannes P Van Dijken
  • Patent number: 10174296
    Abstract: Disclosed are genetically engineered organisms, such as yeast and bacteria, that have the ability to metabolize atypical phosphorus or sulfur sources. Fermentation methods using the genetically engineered organisms are also described. The fermentation methods are robust processes for the industrial bioproduction of a variety of compounds, including commodities, fine chemicals, and pharmaceuticals.
    Type: Grant
    Filed: August 27, 2014
    Date of Patent: January 8, 2019
    Assignee: Novogy, Inc.
    Inventors: Arthur J. Shaw, IV, Colin R. South, Johannes P. Van Dijken
  • Patent number: 9765348
    Abstract: Disclosed are genetically engineered organisms, such as yeast and bacteria, that have the ability to metabolize atypical nitrogen sources, such as melamine and cyanamide. Fermentation methods using the genetically engineered organisms are also described. The methods of the invention are robust processes for the industrial bioproduction of a variety of compounds, including commodities, fine chemicals, and pharmaceuticals.
    Type: Grant
    Filed: January 6, 2014
    Date of Patent: September 19, 2017
    Assignee: Novogy, Inc.
    Inventors: Colin R. South, Arthur J. Shaw, IV
  • Publication number: 20170204401
    Abstract: Disclosed are methods and compositions for reducing horizontal gene transfer of functional proteins. In some embodiments, the risk of horizontal gene transfer of a functional protein is reduced by separately encoding domains of a protein on at least two spatially distinct nucleic acid sequences, where each individual domain alone is non-functional, but co-expression of the encoded domains results in their association to form a functional protein.
    Type: Application
    Filed: March 3, 2015
    Publication date: July 20, 2017
    Applicant: Novogy, Inc.
    Inventors: Elena E. Brevnova, Emily H. Greenhagen, Arthur J. Shaw, IV, Colin R. South
  • Publication number: 20160215274
    Abstract: Disclosed are genetically engineered organisms, such as yeast and bacteria, that have the ability to metabolize atypical phosphorus or sulfur sources. Fermentation methods using the genetically engineered organisms are also described. The fermentation methods are robust processes for the industrial bioproduction of a variety of compounds, including commodities, fine chemicals, and pharmaceuticals.
    Type: Application
    Filed: August 27, 2014
    Publication date: July 28, 2016
    Inventors: Arthur J. Shaw, Colin R. South, Johannes P. Van Dijken
  • Publication number: 20160115492
    Abstract: Disclosed are genetically engineered organisms, such as yeast and bacteria, that have the ability to metabolize atypical nitrogen sources, such as melamine and cyanamide. Fermentation methods using the genetically engineered organisms are also described. The methods of the invention are robust processes for the industrial bioproduction of a variety of compounds, including commodities, fine chemicals, and pharmaceuticals.
    Type: Application
    Filed: January 6, 2014
    Publication date: April 28, 2016
    Applicant: NOVOGY, INC.
    Inventors: Colin R. South, Arthur J. Shaw, IV
  • Publication number: 20100285534
    Abstract: One aspect of the present invention relates to a method of processing lignocellulosic material, comprising initial steam pretreatment to give pretreated lignocellulosic material with an average particle size, followed by refining to give refined lignocellulosic material with an average particle size, wherein the average particle of the pretreated lignocellulosic material is greater than the average particle size of the refined lignocellulosic material. In certain embodiments, the lignocellulosic material is selected from the group consisting of grass, switch grass, cord grass, rye grass, reed canary grass, miscanthus, sugar-processing residues, sugar cane bagasse, agricultural wastes, rice straw, rice hulls, barley straw, corn cobs, cereal straw, wheat straw, canola straw, oat straw, oat hulls, corn fiber, stover, soybean stover, corn stover, forestry wastes, recycled wood pulp fiber, sawdust, hardwood, and softwood.
    Type: Application
    Filed: April 18, 2008
    Publication date: November 11, 2010
    Applicant: MASCOMA CORPORATION
    Inventors: Colin R. South, Herve I. Garant, Richard Lance Martin
  • Publication number: 20100279361
    Abstract: One aspect of the invention relates to a process, comprising treating lignocellulosic biomass according to a first pretreatment protocol, thereby generating a first product mixture; separating the first product mixture into a first plurality of fractions; and treating at least one fraction of said first plurality of fractions according to a second pretreatment protocol, thereby generating a second product mixture. In one embodiment, the lignocellulosic biomass is selected from the group consisting of grass, switch grass, cord grass, rye grass, reed canary grass, miscanthus, sugar-processing residues, sugarcane bagasse, agricultural wastes, rice straw, rice hulls, barley straw, corn cobs, cereal straw, wheat straw, canola straw, oat straw, oat hulls, corn fiber, stover, soybean stover, corn stover, forestry wastes, recycled wood pulp protocol protocol fiber, paper sludge, sawdust, hardwood, softwood, and combinations thereof.
    Type: Application
    Filed: May 2, 2008
    Publication date: November 4, 2010
    Applicant: Mascoma Corporation
    Inventors: Colin R. South, Charles E. Wyman, Richard Lance Martin
  • Patent number: 5837506
    Abstract: An improved continuous process for producing ethanol from cellulosic materials employs an intermittently agitated, perpetually fed, solids retaining reactor vessel. Cellulosic substrate, catalysts and fermentation agents are introduced into a reaction vessel to form a slurry. The slurry is agitated for a first selected time interval under conditions sufficient to initiate and maintain a fermentation reaction and then allowed to settle during a second selected time interval. At the end of the second selected time interval an ethanol-containing effluent is removed from the vessel. Thereafter, additional cellulosic material, catalysts and fermentation agents are added to the reactor vessel. This operating cycle is repeated virtually perpetually to effect the ethanol production. It can be implemented using a single bioreactor or a cascade of bioreactors.
    Type: Grant
    Filed: August 19, 1997
    Date of Patent: November 17, 1998
    Assignee: The Trustee of Dartmouth College
    Inventors: Lee R. Lynd, Colin R. South
  • Patent number: 4771396
    Abstract: A transversal finite impulse response, adaptive digital filter comprises three stages (10, 11, 12). The stage (10) is a memory stage which stores input samples x and coefficients. The second stage (11) is an arithmetic stage which forms convolution products and accumulates the product to provide an output. The third stage (12) forms update values for updating the coefficients according to a predetermined algorithm. The stages are coupled by buses (14, 15) and data transfer between the stages via the buses is controlled by a control unit (18). The filter operates so that convolution products are formed during a first part of each sample period and update values are formed during a second part of each sample period for use in the subsequent sample period.
    Type: Grant
    Filed: March 14, 1985
    Date of Patent: September 13, 1988
    Assignee: British Telecommunications PLC
    Inventors: Colin R. South, Alwyn V. Lewis