Patents by Inventor Daemon G. Anastas

Daemon G. Anastas has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • DNA alignment using a hierarchical inverted index table
    Patent number: 11594301
    Abstract: System and method for constructing a hierarchical index table usable for matching a search sequence to reference data. The index table may be constructed to contain entries associated with an exhaustive list of all subsequences of a given length, wherein each entry contains the number and locations of matches of each subsequence in the reference data. The hierarchical index table may be constructed in an iterative manner, wherein entries for each lengthened subsequence are selectively and iteratively constructed based on the number of matches being greater than each of a set of respective thresholds. The hierarchical index table may be used to search for matches between a search sequence and reference data, and to perform misfit identification and characterization upon each respective candidate match.
    Type: Grant
    Filed: October 21, 2016
    Date of Patent: February 28, 2023
    Assignee: Coherent Logix, Incorporated
    Inventors: Michael B. Doerr, Jan D. Garmany, Stephen V. Wood, Daemon G. Anastas, Martin A. Hunt
  • DNA Alignment using a Hierarchical Inverted Index Table
    Publication number: 20170116370
    Abstract: System and method for constructing a hierarchical index table usable for matching a search sequence to reference data. The index table may be constructed to contain entries associated with an exhaustive list of all subsequences of a given length, wherein each entry contains the number and locations of matches of each subsequence in the reference data. The hierarchical index table may be constructed in an iterative manner, wherein entries for each lengthened subsequence are selectively and iteratively constructed based on the number of matches being greater than each of a set of respective thresholds. The hierarchical index table may be used to search for matches between a search sequence and reference data, and to perform misfit identification and characterization upon each respective candidate match.
    Type: Application
    Filed: October 21, 2016
    Publication date: April 27, 2017
    Inventors: Michael B. Doerr, Jan D. Garmany, Stephen V. Wood, Daemon G. Anastas, Martin A. Hunt