Patents by Inventor Dan Levy
Dan Levy has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Patent number: 12516367Abstract: This invention provides a method for sequencing a nucleic acid molecule (NAM) that comprises two or more segments having substantially the same sequence, and that has a length of more than one sequencing read, comprising i) obtaining two more copies of the NAM; ii) subjecting each copy of the NAM in step i) to a mutagenesis that mutates only select nucleic acid positions in the NAMs at a rate of 10% to 90% to produce mutated copies of the NAM (mcNAM); iii) amplifying each of the mcNAMs; iv) obtaining composite sequences of the mcNAMs that are produced by assembling sequence reads of the amplified mcNAMs, such that when taken together, span as much as possible of the entire length of the NAM, thereby sequencing the NAM.Type: GrantFiled: May 14, 2021Date of Patent: January 6, 2026Assignee: COLD SPRING HARBOR LABORATORYInventors: Michael Wigler, Dan Levy
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Publication number: 20250290128Abstract: This invention provides a method for obtaining microsatellite lengths from initial nucleic acid templates each of which comprise a microsatellite and two flanking portions, which define the microsatellite and its locus.Type: ApplicationFiled: September 9, 2022Publication date: September 18, 2025Applicant: Cold Spring Harbor LaboratoryInventors: Michael Wigler, Dan Levy, Siran Li, Zihua Wang, Andrea Moffitt, Peter Andrews
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Publication number: 20240237655Abstract: Plant protection mixture and composition comprising a protective effective amount of mycorrhizal fungi of the species G. manihotis and G. deserticola. Applying a protective effective amount of the composition is protects plants from a fungal pathogen attack. The composition can be applied to the soil or the growth media of loci of the plant or propagating material of the plant, to the roots or as a seed coating. The plant protection composition can be applied in combination with chemical fungicides.Type: ApplicationFiled: May 24, 2022Publication date: July 18, 2024Inventors: Yochai ISACK, Dan LEVY, Yosef KOFMAN
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Patent number: 11739315Abstract: The present invention, SMASH (Short Multiply Aggregated Sequence Homologies), is a technique designed to pack multiple independent mappings into every read. Specifically, the invention relates to a composition comprising a first mixture of different chimeric genomic nucleic acid fragments, wherein each different fragment in the mixture comprises randomly ligated DNA segments, wherein each DNA segment in the fragment is a nucleic acid molecule at least 27 base pairs in length resulting from random fragmentation of a single genome. The invention also relates to methods for generating said composition and use of said composition to obtain genomic information, for example, copy number variation.Type: GrantFiled: May 3, 2019Date of Patent: August 29, 2023Assignee: COLD SPRING HARBOR LABORATORYInventors: Michael H. Wigler, Dan Levy, Zihua Wang
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Publication number: 20210340604Abstract: A method for determining the number of nucleic acid molecules (NAMs) in a group of NAMs, comprising i) obtaining an amplified and mutagenized group of NAMs that was produced by a. subjecting the group of NAMs to a chemical mutagenesis which mutates only select nucleic acid bases in the group of NAMs at a rate of 10% to 90% thus forming a group of mutagenized NAMs (mNAMs), and b. amplifying the group of mNAMs; ii) obtaining sequences of the mNAMs in the group of amplified mNAMs; and iii) counting the number of different sequences obtained in step (ii) to determine the number of unique mNAMs in the group of mNAMS, thereby determining the number of NAMs in the group of NAMs.Type: ApplicationFiled: May 14, 2021Publication date: November 4, 2021Applicant: Cold Spring Harbor LaboratoryInventors: Michael Wigler, Dan Levy
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Patent number: 11008606Abstract: A method for determining the number of nucleic acid molecules (NAMs) in a group of NAMs, comprising i) obtaining an amplified and mutagenized group of NAMs that was produced by a. subjecting the group of NAMs to a chemical mutagenesis which mutates only select nucleic acid bases in the group of NAMs at a rate of 10% to 90% thus forming a group of mutagenized NAMs (mNAMs), and b. amplifying the group of mNAMs; ii) obtaining sequences of the mNAMs in the group of amplified mNAMs; and iii) counting the number of different sequences obtained in step (ii) to determine the number of unique mNAMs in the group of mNAMS, thereby determining the number of NAMs in the group of NAMs.Type: GrantFiled: October 9, 2015Date of Patent: May 18, 2021Assignee: Cold Spring Harbor LaboratoryInventors: Michael Wigler, Dan Levy
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Patent number: 10731149Abstract: The present invention, SMASH (Short Multiply Aggregated Sequence Homologies), is a technique designed to pack multiple independent mappings into every read. Specifically, the invention relates to a composition comprising a first mixture of different chimeric genomic nucleic acid fragments, wherein each different fragment in the mixture comprises randomly ligated DNA segments, wherein each DNA segment in the fragment is a nucleic acid molecule at least 27 base pairs in length resulting from random fragmentation of a single genome. The invention also relates to methods for generating said composition and use of said composition to obtain genomic information, for example, copy number variation.Type: GrantFiled: January 30, 2017Date of Patent: August 4, 2020Assignee: Cold Spring Harbor LaboratoryInventors: Michael H. Wigler, Dan Levy, Zihua Wang
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Publication number: 20190360023Abstract: The present invention, SMASH (Short Multiply Aggregated Sequence Homologies), is a technique designed to pack multiple independent mappings into every read. Specifically, the invention relates to a composition comprising a first mixture of different chimeric genomic nucleic acid fragments, wherein each different fragment in the mixture comprises randomly ligated DNA segments, wherein each DNA segment in the fragment is a nucleic acid molecule at least 27 base pairs in length resulting from random fragmentation of a single genome. The invention also relates to methods for generating said composition and use of said composition to obtain genomic information, for example, copy number variation.Type: ApplicationFiled: May 3, 2019Publication date: November 28, 2019Applicant: Cold Spring Harbor LaboratoryInventors: Michael H. Wigler, Dan Levy, Zihua Wang
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Publication number: 20170306392Abstract: A method for determining the number of nucleic acid molecules (NAMs) in a group of NAMs, comprising i) obtaining an amplified and mutagenized group of NAMs that was produced by a. subjecting the group of NAMs to a chemical mutagenesis which mutates only select nucleic acid bases in the group of NAMs at a rate of 10% to 90% thus forming a group of mutagenized NAMs (mNAMs), and b. amplifying the group of mNAMs; ii) obtaining sequences of the mNAMs in the group of amplified mNAMs; and iii) counting the number of different sequences obtained in step (ii) to determine the number of unique mNAMs in the group of mNAMS, thereby determining the number of NAMs in the group of NAMs.Type: ApplicationFiled: October 9, 2015Publication date: October 26, 2017Applicant: Cold Spring Harbor LaboratoryInventors: Michael Wigler, Dan Levy
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Publication number: 20170152548Abstract: The present invention, SMASH (Short Multiply Aggregated Sequence Homologies), is a technique designed to pack multiple independent mappings into every read. Specifically, the invention relates to a composition comprising a first mixture of different chimeric genomic nucleic acid fragments, wherein each different fragment in the mixture comprises randomly ligated DNA segments, wherein each DNA segment in the fragment is a nucleic acid molecule at least 27 base pairs in length resulting from random fragmentation of a single genome. The invention also relates to methods for generating said composition and use of said composition to obtain genomic information, for example, copy number variation.Type: ApplicationFiled: January 30, 2017Publication date: June 1, 2017Applicant: Cold Spring Harbor LaboratoryInventors: Michael H. Wigler, Dan Levy, Zihua Wang
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Patent number: 8626651Abstract: A method and system for resolving disputes between parties involved in a network-based transaction is described. One aspect of the present invention seeks to automatically facilitate the restitution of value to parties of the transaction, for example, facilitated by a network-based commerce platform or involving a network-based payment service, where a dispute has arisen with respect to the transaction.Type: GrantFiled: December 15, 2009Date of Patent: January 7, 2014Assignee: eBay Inc.Inventors: Huey Lin, Max Levchin, Gina Han, Theodore Douglas Levan, Dan Levy, Chris McGraw, Erik Klein, Greg Cervelli, Steven Wo, Carl Freeland, May Chen, Kristen Wilson, Jason Nielson, Kyle Haffey, Julie Gonzales, Denise Aptekar
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Patent number: 7870066Abstract: A method and system for resolving disputes between parties involved in a network-based transaction is described. One aspect of the present invention seeks to automatically facilitate the restitution of value to parties of the transaction, for example, facilitated by a network-based commerce platform or involving a network-based payment service, where a dispute has arisen with respect to the transaction.Type: GrantFiled: April 30, 2004Date of Patent: January 11, 2011Assignee: eBay Inc.Inventors: Huey Lin, Max Levchin, Gina Han, Theodore Douglas LeVan, Dan Levy, Chris McGraw, Erik Klein, Greg Cervelli, Steven Wo, Carl Freeland, May Chen, Kristen Wilson, Jason Nielsen, Kyle Haffey, Julie Gonzales, Denise Aptekar
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Publication number: 20100100483Abstract: A method and system for resolving disputes between parties involved in a network-based transaction is described. One aspect of the present invention seeks to automatically facilitate the restitution of value to parties of the transaction, for example, facilitated by a network-based commerce platform or involving a network-based payment service, where a dispute has arisen with respect to the transaction.Type: ApplicationFiled: December 15, 2009Publication date: April 22, 2010Inventors: Huey Lin, Max Levchin, Gina Han, Theodore Douglas Levin, Dan Levy, Chris McGraw, Erik Klein, Greg Cervelli, Steven Wo, Carl Freeland, May Chen, Kristen Wilson, Jason Nielson, Kyle Haffey, Julie Gonzales, Denise Aptekar
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Publication number: 20050125340Abstract: A method and system for resolving disputes between parties involved in a network-based transaction is described. One aspect of the present invention seeks to automatically facilitate the restitution of value to parties of the transaction, for example, facilitated by a network-based commerce platform or involving a network-based payment service, where a dispute has arisen with respect to the transaction.Type: ApplicationFiled: April 30, 2004Publication date: June 9, 2005Inventors: Huey Lin, Max Levchin, Gina Han, Theodore LeVan, Dan Levy, Chris McGraw, Erik Klein, Greg Cervelli, Steven Wo, Carl Freeland, May Chen, Kristen Wilson, Jason Nielsen, Kyle Haffey, Julie Gonzales, Denise Aptekar
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Patent number: 4936479Abstract: A hamburger holder is provided and consists of a pair of hollow semi-cylindrical disc-shaped receptacles. The hamburger is stored within the receptacles until one is removed allowing a person to hold the remaining receptacle and eat the hamburger.Type: GrantFiled: April 17, 1989Date of Patent: June 26, 1990Inventors: Dan Levy, George Spector