Abstract: A portable system and method for producing biofuel from algae are disclosed. In the portable system, a chemostat and a plug flow reactor formed from plastic bladders are interconnected. Further, an algae separator is in fluid communication with the plug flow reactor for removing algae cells. Also, the system includes a device for processing biofuel from the algae cells. Importantly, the system includes a temperature controller to maintain desired temperatures in the chemostat and plug flow reactor for algae growth and intracellular algae production. In order to further support algae cell growth, the system includes a device for capturing carbon dioxide and delivering the carbon dioxide to the chemostat.