Patents by Inventor David A. Jaffe

David A. Jaffe has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20090148842
    Abstract: The invention relates to a method of preparing and using a library of template polynucleotides suitable for use as templates in solid-phase nucleic acid amplification and sequencing reactions to determine the methylation status of the cytosine bases in the library. In particular, the invention relates to a method of preparing and analysing a library of template polynucleotides suitable for methylation analysis.
    Type: Application
    Filed: February 7, 2008
    Publication date: June 11, 2009
    Inventors: Niall Gormley, Andreas Gnirke, David Jaffe, Harris Nusbaum
  • Publication number: 20090121287
    Abstract: A semiconductor device having wiring levels on opposite sides, a method of fabricating a semiconductor structure having contacts to devices and wiring levels on opposite sides, and a design structure of a semiconductor device having wiring levels on opposite sides. The method including fabricating a device on a silicon-on-insulator substrate with first contacts to the devices and wiring levels on a first side to the first contacts, removing a lower silicon layer to expose the buried oxide layer, forming second contacts to the devices through the buried oxide layer and forming wiring levels over the buried oxide layer to the second contacts.
    Type: Application
    Filed: November 14, 2007
    Publication date: May 14, 2009
    Inventors: Kerry Bernstein, Timothy Joseph Dalton, Jeffrey Peter Gambino, Mark David Jaffe, Paul David Kartschoke, Anthony Kendall Stamper
  • Publication number: 20090121260
    Abstract: A double-sided integrated circuit chips, methods of fabricating the double-sided integrated circuit chips and design structures for double-sided integrated circuit chips. The method includes removing the backside silicon from two silicon-on-insulator wafers having devices fabricated therein and bonding them back to back utilizing the buried oxide layers. Contacts are then formed in the upper wafer to devices in the lower wafer and wiring levels are formed on the upper wafer. The lower wafer may include wiring levels. The lower wafer may include landing pads for the contacts. Contacts to the silicon layer of the lower wafer may be silicided.
    Type: Application
    Filed: November 14, 2007
    Publication date: May 14, 2009
    Inventors: Kerry Bernstein, Timothy Joseph Dalton, Jeffrey Peter Gambino, Mark David Jaffe, Paul David Kartschoke, Stephen Ellinwood Luce, Anthony Kendall Stamper
  • Publication number: 20090065925
    Abstract: An electronic device and method of packaging an electronic device. The device including: a first substrate, a second substrate and an integrated circuit chip having a first side and an opposite second side, a first set of chip pads on the first side and a second set of chip pads on the second side of the integrated circuit chip, chip pads of the first set of chip pads physically and electrically connected to corresponding substrate pads on the first substrate and chip pads of the second set of chip pads physically and electrically connected to substrate pads of the substrate.
    Type: Application
    Filed: August 6, 2008
    Publication date: March 12, 2009
    Inventors: Kerry Bernstein, Timothy Dalton, Timothy Harrison Daubenspeck, Jeffrey Peter Gambino, Mark David Jaffe, Christopher David Muzzy, Wolfgang Sauter, Edmund Sprogis, Anthony Kendall Stamper
  • Patent number: 7492048
    Abstract: Structures and method for forming the same. The semiconductor structure comprises a photo diode that includes a first semiconductor region and a second semiconductor region. The first and second semiconductor regions are doped with a first and second doping polarities, respectively, and the first and second doping polarities are opposite. The semiconductor structure also comprises a transfer gate that comprises (i) a first extension region, (ii) a second extension region, and (iii) a floating diffusion region. The first and second extension regions are in direct physical contact with the photo diode and the floating diffusion region, respectively. The semiconductor structure further comprises a charge pushing region. The charge pushing region overlaps the first semiconductor region and does not overlap the floating diffusion region. The charge pushing region comprises a transparent and electrically conducting material.
    Type: Grant
    Filed: January 10, 2006
    Date of Patent: February 17, 2009
    Assignee: International Business Machines Corporation
    Inventors: James William Adkisson, Jeffrey Peter Gambino, Mark David Jaffe, Jeffrey Bowman Johnson, Jerome Brett Lasky, Richard John Rassel
  • Publication number: 20080308948
    Abstract: Structures for aligning wafers and methods for operating the same. The structure includes (a) a first semiconductor wafer including a first capacitive coupling structure, and (b) a second semiconductor wafer including a second capacitive coupling structure. The first and second semiconductor wafers are in direct physical contact with each other via a common surface. If the first and second semiconductor wafers are moved with respect to each other by a first displacement distance of 1 nm in a first direction while the first and second semiconductor wafers are in direct physical contact with each other via the common surface, then a change of at least 10?18 F in capacitance of a first capacitor comprising the first and second capacitive coupling structures results. The first direction is essentially parallel to the common surface.
    Type: Application
    Filed: August 26, 2008
    Publication date: December 18, 2008
    Inventors: Thomas Joseph Dalton, Jeffrey Peter Gambino, Mark David Jaffe, Stephen Ellinwood Luce, Edmund Juris Sprogis
  • Patent number: 7462509
    Abstract: An method of packaging an electronic device. The method for packaging the device including: providing a first substrate, a second substrate and an integrated circuit chip having a first side and an opposite second side, a first set of chip pads on the first side and a second set of chip pads on the second side of the integrated circuit chip, chip pads of the first set of chip pads physically and electrically connected to corresponding substrate pads on the first substrate and chip pads of the second set of chip pads physically and electrically connected to substrate pads of the substrate.
    Type: Grant
    Filed: May 16, 2006
    Date of Patent: December 9, 2008
    Assignee: International Business Machines Corporation
    Inventors: Kerry Bernstein, Timothy Dalton, Timothy Harrison Daubenspeck, Jeffrey Peter Gambino, Mark David Jaffe, Christopher David Muzzy, Wolfgang Sauter, Edmund Sprogis, Anthony Kendall Stamper
  • Publication number: 20080213948
    Abstract: A semiconductor device having wiring levels on opposite sides and a method of fabricating a semiconductor structure having contacts to devices and wiring levels on opposite sides. The method including fabricating a device on a silicon-on-insulator substrate with first contacts to the devices and wiring levels on a first side to the first contacts, removing a lower silicon layer to expose the buried oxide layer, forming second contacts to the devices through the buried oxide layer and forming wiring levels over the buried oxide layer to the second contacts.
    Type: Application
    Filed: February 12, 2008
    Publication date: September 4, 2008
    Inventors: Kerry Bernstein, Timothy Joseph Dalton, Jeffrey Peter Gambino, Mark David Jaffe, Paul David Kartschoke, Anthony Kendall Stamper
  • Publication number: 20080128812
    Abstract: A semiconductor device having wiring levels on opposite sides and a method of fabricating a semiconductor structure having contacts to devices and wiring levels on opposite sides. The method including fabricating a device on a silicon-on-insulator substrate with first contacts to the devices and wiring levels on a first side to the first contacts, removing a lower silicon layer to expose the buried oxide layer, forming second contacts to the devices through the buried oxide layer and forming wiring levels over the buried oxide layer to the second contacts.
    Type: Application
    Filed: February 12, 2008
    Publication date: June 5, 2008
    Inventors: Kerry Bernstein, Timothy Joseph Dalton, Jeffrey Peter Gambino, Mark David Jaffe, Paul David Kartschoke, Anthony Kendall Stamper
  • Patent number: 7381627
    Abstract: A semiconductor device having wiring levels on opposite sides and a method of fabricating a semiconductor structure having contacts to devices and wiring levels on opposite sides. The method including fabricating a device on a silicon-on-insulator substrate with first contacts to the devices and wiring levels on a first side to the first contacts, removing a lower silicon layer to expose the buried oxide layer, forming second contacts to the devices through the buried oxide layer and forming wiring levels over the buried oxide layer to the second contacts.
    Type: Grant
    Filed: July 9, 2007
    Date of Patent: June 3, 2008
    Assignee: International Business Machines Corporation
    Inventors: Kerry Bernstein, Timothy Joseph Dalton, Jeffrey Peter Gambino, Mark David Jaffe, Paul David Kartschoke, Anthony Kendall Stamper
  • Publication number: 20070267746
    Abstract: An electronic device and method of packaging an electronic device. The device including: a first substrate, a second substrate and an integrated circuit chip having a first side and an opposite second side, a first set of chip pads on the first side and a second set of chip pads on the second side of the integrated circuit chip, chip pads of the first set of chip pads physically and electrically connected to corresponding substrate pads on the first substrate and chip pads of the second set of chip pads physically and electrically connected to substrate pads of the substrate.
    Type: Application
    Filed: May 16, 2006
    Publication date: November 22, 2007
    Inventors: Kerry Bernstein, Timothy Dalton, Timothy Harrison Daubenspeck, Jeffrey Peter Gambino, Mark David Jaffe, Christopher David Muzzy, Wolfgang Sauter, Edmund Sprogis, Anthony Kendall Stamper
  • Publication number: 20070267723
    Abstract: A semiconductor structure and method of fabricating the structure. The method includes removing the backside silicon from two silicon-on-insulator wafers having devices fabricated therein and bonding them back to back utilizing the buried oxide layers. Contacts are then formed in the upper wafer to devices in the lower wafer and wiring levels are formed on the upper wafer. The lower wafer may include wiring levels. The lower wafer may include landing pads for the contacts. Contacts to the silicon layer of the lower wafer may be silicided.
    Type: Application
    Filed: May 16, 2006
    Publication date: November 22, 2007
    Inventors: Kerry Bernstein, Timothy Joseph Dalton, Jeffrey Peter Gambino, Mark David Jaffe, Paul David Kartschoke, Stephen Ellinwood Luce, Anthony Kendall Stamper
  • Patent number: 7285477
    Abstract: A semiconductor device having wiring levels on opposite sides and a method of fabricating a semiconductor structure having contacts to devices and wiring levels on opposite sides. The method including fabricating a device on a silicon-on-insulator substrate with first contacts to the devices and wiring levels on a first side to the first contacts, removing a lower silicon layer to expose the buried oxide layer, forming second contacts to the devices through the buried oxide layer and forming wiring levels over the buried oxide layer to the second contacts.
    Type: Grant
    Filed: May 16, 2006
    Date of Patent: October 23, 2007
    Assignee: International Business Machines Corporation
    Inventors: Kerry Bernstein, Timothy Joseph Dalton, Jeffrey Peter Gambino, Mark David Jaffe, Paul David Kartschoke, Anthony Kendall Stamper
  • Patent number: 7193423
    Abstract: Structures for aligning wafers and methods for operating the same. The structure includes (a) a first semiconductor wafer including a first capacitive coupling structure, and (b) a second semiconductor wafer including a second capacitive coupling structure. The first and second semiconductor wafers are in direct physical contact with each other via a common surface. If the first and second semiconductor wafers are moved with respect to each other by a first displacement distance of 1 nm in a first direction while the first and second semiconductor wafers are in direct physical contact with each other via the common surface, then a change of at least 10?18 F in capacitance of a first capacitor comprising the first and second capacitive coupling structures results. The first direction is essentially parallel to the common surface.
    Type: Grant
    Filed: December 12, 2005
    Date of Patent: March 20, 2007
    Assignee: International Business Machines Corporation
    Inventors: Timothy Joseph Dalton, Jeffrey Peter Gambino, Mark David Jaffe, Stephen Ellinwood Luce, Edmund Juris Sprogis
  • Publication number: 20030174147
    Abstract: A device, system and method may simulate a virtual model or modeling platform. A device, system and method for simulating a physical system such as a virtual simulation, living being, machine, etc., is capable of placing a set of virtual objects into a virtual work space, the virtual work space typically having a set of global definitions, simulating the interaction of the virtual objects and virtual work space, and displaying the simulated interaction. The device, system and method may include the capability of authoring a virtual simulation or experiment. A device, system or method may define a set of virtual objects and a virtual work space, the virtual objects having object parameters and the virtual work space having a set of global parameters, and place into a simulation data file the virtual experiment objects and said virtual work space. A student or researcher may conduct a virtual experiment using a computer system.
    Type: Application
    Filed: February 13, 2003
    Publication date: September 18, 2003
    Inventor: David Jaffe
  • Publication number: 20030066026
    Abstract: The present invention includes a virtual experiment authoring application and a virtual experiment presentation application. As part of the present invention, at least two virtual experiment objects, each object including a data structure with at least one parameter defining a physical characteristic of the virtual experiment object, may be placed within a virtual work space in an arrangement defining an initial state of a system formed by the at least two virtual experiment objects. The virtual work space may include at least one global parameter, and a translation module which may derive at least one equation defining a mathematical model of a system formed by the at least two virtual experiment objects within the virtual environment. Also included in the present invention may be a virtual lab area and a simulation engine.
    Type: Application
    Filed: August 13, 2002
    Publication date: April 3, 2003
    Inventor: David Jaffe
  • Patent number: 5781461
    Abstract: A sampled data, delay line structure that includes a sampled data delay line, two readers for reading data at corresponding positions of the delay line, controller that controls when the read position of each reader is updated for a new note of a different pitch, and a crossfader that crossfades between the outputs of the two readers to produce a legato transition between the two discrete notes associated with the two readers. The controller receives a control signal indicating a sequence of note events to be implemented by the delay line structure. When a new note on event occurs while a previous note is still playing, a legato crossfade sequence is performed. In particular, the delay line reader not used by the previous note is set to a delay position associated with the new note, and the crossfader is enabled. The crossfader gradually transitions its output from that of the reader used for the previous note to the output of the reader used from the new note.
    Type: Grant
    Filed: September 4, 1996
    Date of Patent: July 14, 1998
    Assignee: Board of Trustees of the Leland Stanford Junior University
    Inventors: David A. Jaffe, Julius O. Smith, III
  • Patent number: 5742532
    Abstract: A sampled data, non-integer delay line interpolation structure includes a sampled data delay line, two allpass filters, each having an associated read pointer for reading data at a corresponding integer position of the delay line, an alternating crossfader that alternatingly crossfades between the outputs of the two allpass filters, plus a controller that controls when the read position of each allpass filter is updated and also controls when the filter coefficient of each allpass filter is updated. A specified delay length value is sampled by the controller each time the crossfade orientation of the alternating crossfader is changed, and from that value the controller generates a new read pointer and filter coefficient for allpass filter to which the structure will next crossfade. The new read pointer is an integer that corresponds to an integer portion of the specified delay length, and the filter coefficient corresponds to a fractional portion of the specified delay length.
    Type: Grant
    Filed: May 9, 1996
    Date of Patent: April 21, 1998
    Assignee: The Board of Trustees of the Leland Stanford Junior University
    Inventors: Scott A. Van Duyne, David A. Jaffe, Gregory P. Scandalis, Timothy S. Stilson