Patents by Inventor David Barbie
David Barbie has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Publication number: 20250295686Abstract: Provided herein are methods for treating a subject having cancer comprising administering to the subject a therapeutically effective amount of an epigenetic inhibitor, followed by a therapeutically effective amount of a DNA damaging agent. Also provided herein are methods for treating a subject having cancer based on the expression levels of STING and/or an epigenetic regulatory enzyme in a biological sample taken from the subject. Further provided herein are kits comprising an epigenetic inhibitor and a DNA damaging agent.Type: ApplicationFiled: October 18, 2022Publication date: September 25, 2025Inventors: David Barbie, Shunsuke Kitajima, Tetsuo Tani, Cloud P. Paweletz, Prafulla C. Gokhale
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Patent number: 12116636Abstract: Methods are provided for evaluating tumor cell spheroids in a three-dimensional microfluidic device by determining changes in the relative levels of live cells and dead cells in aliquots cultured under different conditions. Methods are also described for allowing ex vivo recapitulation of the tumor microenvironment such that the in vivo effectiveness of a test compound in treating tumor tissue may be predicted.Type: GrantFiled: July 19, 2021Date of Patent: October 15, 2024Assignee: Dana-Farber Cancer Institute, Inc.Inventors: David Barbie, Russell W Jenkins, Cloud P. Paweletz, Elena Ivanova, Amir Aref
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Publication number: 20240125787Abstract: Provided herein are STING and SPARCS genes as biomarkers for determining an effective therapy for treating cancer. Further provided are methods for treating cancer using said biomarkers.Type: ApplicationFiled: December 5, 2023Publication date: April 18, 2024Applicants: Dana-Farber Cancer Institute, Inc., The Brigham and Women's Hospital, Inc.Inventors: David Barbie, Israel Cañadas, Shunsuke Kitajima, Thanh Barbie
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Patent number: 11874276Abstract: Provided herein are Stimulator of Interferon Genes (STING) and Stimulated 3 Prime Antisense Retroviral Coding Sequences (SPARCS) genes as biomarkers for determining an effective therapy for treating cancer. Further provided are methods for treating cancer using said biomarkers.Type: GrantFiled: April 5, 2019Date of Patent: January 16, 2024Assignees: Dana-Farber Cancer Institute, Inc., The Brigham and Women's Hospital, Inc.Inventors: David Barbie, Israel Cañadas, Shunsuke Kitajima, Thanh Barbie
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Patent number: 11572590Abstract: Provided herein are methods for evaluating tumor cell spheroids in a three-dimensional microfluidic device by determining changes in the relative levels of live cells and dead cells in aliquots cultured under different conditions. Methods described herein allow ex vivo recapitulation of the tumor microenvironment such that the in vivo effectiveness of a test compound in treating tumor tissue may be predicted.Type: GrantFiled: March 30, 2018Date of Patent: February 7, 2023Assignee: Dana-Farber Cancer Institute, Inc.Inventors: Russell W. Jenkins, David Barbie, Cloud P. Paweletz, Elena Ivanova, Amir Aref
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Publication number: 20220305048Abstract: Disclosed herein are methods for treating a subject having cancer by coadministering a stimulator of interferon signaling and a heparin polysaccharide. Also disclosed herein are pharmaceutical compositions that include a stimulator of interferon signaling and a heparin polysaccharide.Type: ApplicationFiled: August 26, 2020Publication date: September 29, 2022Applicant: Dana-Farber Cancer Institute, Inc.Inventors: Shriram Sundararaman, Erik Knelson, Shunsuke Kitajima, David Barbie, Saemi Han
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Publication number: 20210363595Abstract: Provided herein are methods for evaluating tumor cell spheroids in a three-dimensional microfluidic device by determining changes in the relative levels of live cells and dead cells in aliquots cultured under different conditions. Methods described herein allow ex vivo recapitulation of the tumor microenvironment such that the in vivo effectiveness of a test compound in treating tumor tissue may be predicted.Type: ApplicationFiled: July 19, 2021Publication date: November 25, 2021Applicant: Dana-Farber Cancer Institute, Inc.Inventors: David Barbie, Russell W. Jenkins, Cloud P. Paweletz, Elena Ivanova, Amir Aref
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Patent number: 11098369Abstract: Provided herein are methods for evaluating tumor cell spheroids in a three-dimensional microfluidic device by determining changes in the relative levels of live cells and dead cells in aliquots cultured under different conditions. Methods described herein allow ex vivo recapitulation of the tumor microenvironment such that the in vivo effectiveness of a test compound in treating tumor tissue may be predicted.Type: GrantFiled: August 17, 2018Date of Patent: August 24, 2021Assignee: Dana-Farber Cancer Institute, Inc.Inventors: David Barbie, Russell W. Jenkins, Cloud P. Paweletz, Elena Ivanova, Amir Aref
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Publication number: 20210087635Abstract: Provided herein are methods for evaluating tumor cell spheroids in a three-dimensional microfluidic device by determining changes in the relative levels of live cells and dead cells in aliquots cultured under different conditions. Methods described herein allow ex vivo recapitulation of the tumor microenvironment such that the in vivo effectiveness of a test compound in treating tumor tissue may be predicted.Type: ApplicationFiled: March 30, 2018Publication date: March 25, 2021Applicant: Dana-Farber Cancer Institute, Inc.Inventors: Russell W. Jenkins, David Barbie, Cloud P. Paweletz, Elena Ivanova, Amir Aref
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Publication number: 20210025893Abstract: Provided herein are STING and SPARCS genes as biomarkers for determining an effective therapy for treating cancer. Further provided are methods for treating cancer using said biomarkers.Type: ApplicationFiled: April 5, 2019Publication date: January 28, 2021Applicants: Dana-Farber Cancer Institute, Inc., The Brigham and Women's Hospital Inc.Inventors: David Barbie, Israel Cañadas, Shunsuke Kitajima, Thanh Barbie
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Publication number: 20200399573Abstract: Provided herein are methods for culturing patient-derived tumor cell spheroids in a three-dimensional microfluidic device. The method comprises mincing primary tumor sample in a medium supplemented with serum; treating the minced primary tumor sample with a composition comprising an enzyme; collecting tumor spheroids having a diameter of 10 ?m to 500 ?m from the enzyme treated sample; suspending the tumor spheroids in biocompatible gel; and culturing the tumor spheroids in a three dimensional microfluidic device. Methods for identifying an agent for treating cancer and microfluidic devices that allow for the simultaneous exposure of the cultured patient-derived primary tumor cell spheroids to a treatment of choice and to control treatment are also provided.Type: ApplicationFiled: October 2, 2019Publication date: December 24, 2020Applicant: Dana-Farber Cancer Institute, Inc.Inventors: David Barbie, Amir Aref, Thanh Barbie, Russell W. Jenkins, Kwok-kin Wong
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Publication number: 20200032187Abstract: Provided herein are methods for culturing patient-derived tumor cell spheroids in a three-dimensional microfluidic device. The method comprises mincing primary tumor sample in a medium supplemented with serum; treating the minced primary tumor sample with a composition comprising an enzyme; collecting tumor spheroids having a diameter of 10 ?m to 500 ?m from the enzyme treated sample; suspending the tumor spheroids in biocompatible gel; and culturing the tumor spheroids in a three dimensional microfluidic device. Methods for identifying an agent for treating cancer and microfluidic devices that allow for the simultaneous exposure of the cultured patient-derived primary tumor cell spheroids to a treatment of choice and to control treatment are also provided.Type: ApplicationFiled: October 2, 2019Publication date: January 30, 2020Applicant: Dana-Farber Cancer Institute, Inc.Inventors: David Barbie, Amir Aref, Thanh Barbie, Russell W. Jenkins, Kwok-kin Wong
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Patent number: 10472599Abstract: Provided herein are methods for culturing patient-derived tumor cell spheroids in a three-dimensional microfluidic device. The method comprises mincing primary tumor sample in a medium supplemented with serum; treating the minced primary tumor sample with a composition comprising an enzyme; collecting tumor spheroids having a diameter of 10 ?m to 500 ?m from the enzyme treated sample; suspending the tumor spheroids in biocompatible gel; and culturing the tumor spheroids in a three dimensional microfluidic device. Methods for identifying an agent for treating cancer and microfluidic devices that allow for the simultaneous exposure of the cultured patient-derived primary tumor cell spheroids to a treatment of choice and to control treatment are also provided.Type: GrantFiled: January 7, 2016Date of Patent: November 12, 2019Assignee: Dana-Farber Cancer Institute, Inc.Inventors: David Barbie, Amir Aref, Thanh Barbie, Russell W. Jenkins, Kwok-kin Wong
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Publication number: 20190112666Abstract: Provided herein are methods for evaluating tumor cell spheroids in a three-dimensional microfluidic device by determining changes in the relative levels of live cells and dead cells in aliquots cultured under different conditions. Methods described herein allow ex vivo recapitulation of the tumor microenvironment such that the in vivo effectiveness of a test compound in treating tumor tissue may be predicted.Type: ApplicationFiled: August 17, 2018Publication date: April 18, 2019Applicant: Dana-Farber Cancer Institute, Inc.Inventors: David Barbie, Russell W. Jenkins, Cloud P. Paweletz, Elena Ivanova, Amir Aref
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Publication number: 20170369829Abstract: Provided herein are methods for culturing patient-derived tumor cell spheroids in a three-dimensional microfluidic device. The method comprises mincing primary tumor sample in a medium supplemented with serum; treating the minced primary tumor sample with a composition comprising an enzyme; collecting tumor spheroids having a diameter of 10 ?m to 500 ?m from the enzyme treated sample; suspending the tumor spheroids in biocompatible gel; and culturing the tumor spheroids in a three dimensional microfluidic device. Methods for identifying an agent for treating cancer and microfluidic devices that allow for the simultaneous exposure of the cultured patient-derived primary tumor cell spheroids to a treatment of choice and to control treatment are also provided.Type: ApplicationFiled: January 7, 2016Publication date: December 28, 2017Applicant: Dana-Farber Cancer Institute, Inc.Inventors: David Barbie, Amir Aref, Thanh Barbie, Russell W. Jenkins, Kwok-kin Wong
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Publication number: 20170115291Abstract: The present invention is based on the identification of novel biomarkers predictive of responsiveness to anti-immune checkpoint inhibitor therapies.Type: ApplicationFiled: May 28, 2015Publication date: April 27, 2017Inventors: Kwok-Kin Wong, David Barbie, Eliezer Van Allen