Patents by Inventor David Fabrizio

David Fabrizio has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 12584163
    Abstract: Compositions and methods of evaluating genomic alterations in a sample are disclosed.
    Type: Grant
    Filed: June 11, 2019
    Date of Patent: March 24, 2026
    Assignee: Foundation Medicine, Inc.
    Inventors: Geoffrey Alan Otto, Travis Clark, Doron Lipson, Daniel Lieber, David Fabrizio
  • Publication number: 20260058014
    Abstract: Methods for using tumor heterogeneity score as a biomarker to guide treatment and/or patient monitoring decisions are described. The methods may comprise, for example, acquiring knowledge of a driver mutation in a sample obtained from a subject; identifying one or more variants present in the sample; determining a tumor heterogeneity score for the sample based on the one or more variants; and comparing the tumor heterogeneity score for the sample to a threshold tumor heterogeneity score, where if the tumor heterogeneity score is less than or equal to the threshold tumor heterogeneity score, the subject is identified for treatment with a first anti¬cancer agent, and where if the tumor heterogeneity score is greater than the threshold tumor heterogeneity score, the subject is identified for treatment with a second anti-cancer agent.
    Type: Application
    Filed: March 16, 2023
    Publication date: February 26, 2026
    Applicant: Foundation Medicine, Inc.
    Inventors: Karthikeyan MURUGESAN, Meagan Kathleen MONTESION, David FABRIZIO, Khaled A. TOLBA, Garrett M. FRAMPTON
  • Patent number: 12534511
    Abstract: The present invention relates to polypeptides which include tenth fibronectin type III domains (10Fn3) that binds to serum albumin, with south pole loop substitutions. The invention further relates to fusion molecules comprising a serum albumin-binding 10Fn3 joined to a heterologous protein for use in diagnostic and therapeutic applications.
    Type: Grant
    Filed: November 16, 2021
    Date of Patent: January 27, 2026
    Assignee: Bristol-Myers Squibb Company
    Inventors: Tracy S. Mitchell, Michael L. Gosselin, Dasa Lipovsek, Rex Parker, Ray Camphausen, Jonathan H. Davis, David Fabrizio
  • Patent number: 12473589
    Abstract: Compositions and methods of evaluating genomic alterations in a sample are disclosed.
    Type: Grant
    Filed: February 3, 2025
    Date of Patent: November 18, 2025
    Assignee: Foundation Medicine, Inc.
    Inventors: Geoffrey Alan Otto, Travis Clark, Doron Lipson, Daniel Lieber, David Fabrizio
  • Publication number: 20250306027
    Abstract: The present invention provides therapeutic and diagnostic methods and compositions for cancer, for example, lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma. The invention provides methods of treating cancer (e.g., lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma), methods of determining whether a patient suffering from cancer (e.g., lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma) is likely to respond to treatment comprising a PD-L1 axis binding antagonist, methods of predicting responsiveness of a patient suffering from cancer (e.g., lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma) to treatment comprising a PD-L1 axis binding antagonist, and methods of selecting a therapy for a patient suffering from cancer (e.g.
    Type: Application
    Filed: March 12, 2025
    Publication date: October 2, 2025
    Inventors: David FABRIZIO, Garrett M. FRAMPTON, Priti HEGDE, Marcin KOWANETZ, David SHAMES, Philip J. STEPHENS, James Xin SUN, Roman YELENSKY, Wei ZOU
  • Publication number: 20250244329
    Abstract: The present invention provides therapeutic, diagnostic, and prognostic methods for cancer. The invention provides methods of treating a cancer, methods of determining whether an individual having a cancer is likely to respond to a treatment including an immune checkpoint inhibitor (e.g., a PD-L1 axis binding antagonist), methods of predicting responsiveness of an individual having a cancer to a treatment including an immune checkpoint inhibitor (e.g., a PD-L1 axis binding antagonist), methods of selecting a therapy for an individual having a cancer, methods of providing a prognosis for an individual having a cancer, and methods of monitoring a response of an individual having a cancer, based on a blood tumor mutational burden (bTMB) score or a maximum somatic allele frequency (MSAF) from a sample (e.g., a whole blood sample, a plasma sample, a serum sample, or a combination thereof) from the individual.
    Type: Application
    Filed: November 15, 2024
    Publication date: July 31, 2025
    Inventors: Craig Anthony CUMMINGS, Yan LI, Sarah Margaret SHAGAN, Erica Beth SCHLEIFMAN, David SHAMES, David FABRIZIO, Daniel LIEBER, Geoffrey Alan OTTO, Mark KENNEDY, Travis CLARK, Doron LIPSON, Jie HE, Shan ZHONG
  • Publication number: 20250210194
    Abstract: Methods and systems for determining a tumor heterogeneity score based on genomic data for a patient that is predictive of the estimated duration of the patient's response to a selected treatment for a given disease, e.g., a cancer, are described. In some instances, for example, the methods may comprise: receiving genomic data for a subject having a disease, wherein the genomic data indicates the presence of one or more short variants in a sample derived from the subject; determining a plurality of cancer cell fraction (CCF) measures by calculating a CCF measure for each of the one or more short variants; determining a tumor heterogeneity score (THS) based on the plurality of CCF measures; comparing the tumor heterogeneity score to one or more predetermined THS thresholds; and predicting an estimated duration of the subject's response to a therapy for treating the disease based on the comparison.
    Type: Application
    Filed: March 16, 2023
    Publication date: June 26, 2025
    Applicant: Foundation Medicine, Inc.
    Inventors: Karthikeyan MURUGESAN, Meagan Kathleen MONTESION, David FABRIZIO, Khaled A. TOLBA, Garrett M. FRAMPTON
  • Patent number: 12331128
    Abstract: The present invention provides therapeutic and diagnostic methods and compositions for cancer, for example, bladder cancer. The invention provides methods of treating bladder cancer, methods of determining whether a patient suffering from bladder cancer is likely to respond to treatment comprising a PD-L1 axis binding antagonist, methods of predicting responsiveness of a patient suffering from bladder cancer to treatment comprising a PD-L1 axis binding antagonist, and methods of selecting a therapy for a patient suffering from bladder cancer, based on somatic mutation levels of genes of the invention (e.g., somatic mutation levels in a tumor sample obtained from the patient).
    Type: Grant
    Filed: February 2, 2022
    Date of Patent: June 17, 2025
    Assignees: Genentech, Inc., Foundation Medicine, Inc.
    Inventors: Richard Bourgon, David Fabrizio, Gregg Fine, Garrett M. Frampton, Priti Hegde, Sanjeev Mariathasan, Philip J. Stephens, James Xin Sun, Roman Yelensky
  • Publication number: 20250171836
    Abstract: Compositions and methods of evaluating genomic alterations in a sample are disclosed.
    Type: Application
    Filed: February 3, 2025
    Publication date: May 29, 2025
    Applicant: Foundation Medicine, Inc.
    Inventors: Geoffrey Alan OTTO, Travis CLARK, Doron LIPSON, Daniel LIEBER, David FABRIZIO
  • Patent number: 12194110
    Abstract: Provided herein are novel 10Fn3 domains which specifically bind to PD-L1, as well as imaging agents based on the same for diagnostics.
    Type: Grant
    Filed: September 23, 2021
    Date of Patent: January 14, 2025
    Assignee: Bristol-Myers Squibb Company
    Inventors: Paul E. Morin, David Donnelly, Dasa Lipovsek, Jochem Gokemeijer, Maria N. Jure-Kunkel, David Fabrizio, Martin C. Wright, Douglas Dischino, Samuel J. Bonacorsi, Jr., Ralph Adam Smith, Virginie Lafont, Daniel Cohen
  • Publication number: 20240392378
    Abstract: Methods and compositions for treating cancer such as melanomas are disclosed.
    Type: Application
    Filed: June 22, 2023
    Publication date: November 28, 2024
    Applicants: Foundation Medicine, Inc., Vanderbilt University
    Inventors: Garrett Michael FRAMPTON, Roman YELENSKY, James Xin SUN, Douglas Buckner JOHNSON, Christine Marie LOVLY, Jeffrey Alan SOSMAN, David FABRIZIO, Philip James STEPHENS, Vincent A. MILLER
  • Publication number: 20240288430
    Abstract: The present invention provides therapeutic, diagnostic, and prognostic methods for cancer. The invention provides methods of treating a cancer, methods of determining whether an individual having a cancer is likely to respond to a treatment including an immune checkpoint inhibitor (e.g., a PD-L1 axis binding antagonist), methods of predicting responsiveness of an individual having a cancer to a treatment including an immune checkpoint inhibitor (e.g., a PD-L1 axis binding antagonist), methods of selecting a therapy for an individual having a cancer, methods of providing a prognosis for an individual having a cancer, and methods of monitoring a response of an individual having a cancer, based on a blood tumor mutational burden (bTMB) score or a maximum somatic allele frequency (MSAF) from a sample (e.g., a whole blood sample, a plasma sample, a serum sample, or a combination thereof) from the individual.
    Type: Application
    Filed: November 17, 2023
    Publication date: August 29, 2024
    Inventors: Craig Anthony CUMMINGS, Yan LI, Sarah Margaret SHAGAN, Erica Beth SCHLEIFMAN, David SHAMES, David FABRIZIO, Daniel LIEBER, Geoffrey Alan OTTO, Mark KENNEDY, Travis CLARK, Doron LIPSON, Jie HE, Shan ZHONG
  • Patent number: 11725247
    Abstract: Methods and compositions for treating cancer such as melanomas are disclosed.
    Type: Grant
    Filed: February 27, 2017
    Date of Patent: August 15, 2023
    Assignees: FOUNDATION MEDICINE, INC., VANDERBILT UNIVERSITY
    Inventors: Garrett Michael Frampton, Roman Yelensky, James Xin Sun, Douglas Buckner Johnson, Christine Marie Lovly, Jeffrey Alan Sosman, David Fabrizio, Philip James Stephens, Vincent A. Miller
  • Patent number: 11674962
    Abstract: The present invention provides therapeutic, diagnostic, and prognostic methods for cancer. The invention provides methods of treating a cancer, methods of determining whether an individual having a cancer is likely to respond to a treatment including an immune checkpoint inhibitor (e.g., a PD-L1 axis binding antagonist), methods of predicting responsiveness of an individual having a cancer to a treatment including an immune checkpoint inhibitor (e.g., a PD-L1 axis binding antagonist), methods of selecting a therapy for an individual having a cancer, methods of providing a prognosis for an individual having a cancer, and methods of monitoring a response of an individual having a cancer, based on a blood tumor mutational burden (bTMB) score or a maximum somatic allele frequency (MSAF) from a sample (e.g., a whole blood sample, a plasma sample, a serum sample, or a combination thereof) from the individual.
    Type: Grant
    Filed: July 20, 2018
    Date of Patent: June 13, 2023
    Assignees: Genentech, Inc., Foundation Medicine, Inc.
    Inventors: Craig Anthony Cummings, Yan Li, Sarah Margaret Shagan, Erica Beth Schleifman, David Shames, David Fabrizio, Daniel Lieber, Geoffrey Alan Otto, Mark Kennedy, Travis Clark, Doron Lipson, Jie He, Shan Zhong
  • Publication number: 20220412981
    Abstract: The present invention provides therapeutic and diagnostic methods and compositions for cancer, for example, lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma. The invention provides methods of treating cancer (e.g., lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma), methods of determining whether a patient suffering from cancer (e.g., lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma) is likely to respond to treatment comprising a PD-L1 axis binding antagonist, methods of predicting responsiveness of a patient suffering from cancer (e.g., lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma) to treatment comprising a PD-L1 axis binding antagonist, and methods of selecting a therapy for a patient suffering from cancer (e.g.
    Type: Application
    Filed: March 4, 2022
    Publication date: December 29, 2022
    Inventors: David FABRIZIO, Garrett M. FRAMPTON, Priti HEGDE, Marcin KOWANETZ, David SHAMES, Philip J. STEPHENS, James Xin SUN, Roman YELENSKY, Wei ZOU
  • Publication number: 20220347324
    Abstract: Provided herein are novel 10Fn3 domains which specifically bind to PD-L1, as well as imaging agents based on the same for diagnostics.
    Type: Application
    Filed: April 4, 2022
    Publication date: November 3, 2022
    Inventors: Paul E. MORIN, David DONNELLY, Dasa LIPOVSEK, Jochem GOKEMEIJER, Maria N. JURE-KUNKEL, David FABRIZIO, Martin C. WRIGHT, Douglas DISCHINO, Samuel J. BONACORSI, Jr., Ralph Adam SMITH, Virginie LAFONT, Daniel COHEN, David K. LEUNG
  • Publication number: 20220204589
    Abstract: The present invention relates to polypeptides which include tenth fibronectin type III domains (10Fn3) that binds to serum albumin, with south pole loop substitutions. The invention further relates to fusion molecules comprising a serum albumin-binding 10Fn3 joined to a heterologous protein for use in diagnostic and therapeutic applications.
    Type: Application
    Filed: November 16, 2021
    Publication date: June 30, 2022
    Inventors: Tracy S. MITCHELL, Michael L. Gosselin, Dasa Lipovsek, Rex Parker, Ray Camphausen, Jonathan H. Davis, David Fabrizio
  • Patent number: 11344639
    Abstract: Provided herein are novel 10Fn3 domains which specifically bind to PD-L1, as well as imaging agents based on the same for diagnostics.
    Type: Grant
    Filed: May 31, 2017
    Date of Patent: May 31, 2022
    Assignee: BRISTOL-MYERS SQUIBB COMPANY
    Inventors: Paul E. Morin, David Donnelly, Dasa Lipovsek, Jochem Gokemeijer, Maria Jure-Kunkel, David Fabrizio, Martin C. Wright, Douglas Dischino, Samuel J. Bonacorsi, Jr., Ralph Adam Smith, Virginie Lafont, Daniel Cohen, David K. Leung
  • Publication number: 20220153861
    Abstract: The present invention provides therapeutic and diagnostic methods and compositions for cancer, for example, bladder cancer. The invention provides methods of treating bladder cancer, methods of determining whether a patient suffering from bladder cancer is likely to respond to treatment comprising a PD-L1 axis binding antagonist, methods of predicting responsiveness of a patient suffering from bladder cancer to treatment comprising a PD-L1 axis binding antagonist, and methods of selecting a therapy for a patient suffering from bladder cancer, based on somatic mutation levels of genes of the invention (e.g., somatic mutation levels in a tumor sample obtained from the patient).
    Type: Application
    Filed: February 2, 2022
    Publication date: May 19, 2022
    Inventors: Richard BOURGON, David FABRIZIO, Gregg FINE, Garrett M. FRAMPTON, Priti HEGDE, Sanjeev MARIATHASAN, Philip J. STEPHENS, James Xin SUN, Roman YELENSKY
  • Patent number: 11300570
    Abstract: The present invention provides therapeutic and diagnostic methods and compositions for cancer, for example, lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma. The invention provides methods of treating cancer (e.g., lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma), methods of determining whether a patient suffering from cancer (e.g., lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma) is likely to respond to treatment comprising a PD-L1 axis binding antagonist, methods of predicting responsiveness of a patient suffering from cancer (e.g., lung cancer (e.g., NSCLC), bladder cancer (e.g., UC), kidney cancer (e.g., RCC), breast cancer (e.g., TNBC), or melanoma) to treatment comprising a PD-L1 axis binding antagonist, and methods of selecting a therapy for a patient suffering from cancer (e.g.
    Type: Grant
    Filed: April 1, 2019
    Date of Patent: April 12, 2022
    Assignees: Genentech, Inc., Foundation Medicine, Inc.
    Inventors: David Fabrizio, Garrett M. Frampton, Priti Hegde, Marcin Kowanetz, David Shames, Philip J. Stephens, James Xin Sun, Roman Yelensky, Wei Zou