Patents by Inventor Eleftherios T. Papoutsakis

Eleftherios T. Papoutsakis has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20210275464
    Abstract: The present invention provides bio-nanoparticles (BioNPs) for delivering an active agent into hematopoietic stem & progenitor cells (HSPCs). Each BioNP comprises a core and a biological membrane covering the core, which comprises the active agent and a polymer. The biological membrane comprises a phospholipid bilayer and one or more surface proteins of a megakaryocyte (Mk). The active agent remains active after being delivered into the HSPC. Also provided are methods for preparing the BioNPs and uses of the BioNPs for targeted delivery of an active agent into HSPCs and/or treating or preventing a disease or condition in a subject in need thereof.
    Type: Application
    Filed: May 24, 2021
    Publication date: September 9, 2021
    Applicant: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, Emily Day, Erica Winter, Jenna Harris, Chen-Yuan Kao, Samik Das
  • Patent number: 10717964
    Abstract: A non-naturally occurring microbe capable of growing in a medium comprising methanol is provided. The methanol contributes to a significant percentage (e.g., at least 40%) of the carbon source for the non-naturally occurring microbe, which expresses heterologous methanol dehydrogenase (MDH) and heterologous ribulose monophosphate (RuMP) pathway enzymes. Methods for producing liquid fuels and chemicals by the non-naturally occurring microbe and methods for preparing the non-naturally occurring microbe are also provided.
    Type: Grant
    Filed: July 23, 2018
    Date of Patent: July 21, 2020
    Assignee: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, Sergios Nicolaou, Alan Fast, Vasiliki Falara, Robert Kyle Bennett, William Brian Whitaker, Nicholas Richard Sandoval, Jacqueline Gonzalez, Maciek Antoniewicz
  • Patent number: 10640746
    Abstract: The present invention provides a non-naturally occurring microbe capable of growing in a medium comprising methanol, comprising a heterologous polynucleotide encoding a heterologous methanol dehydrogenase (MDH) derived from a Corynebacterium organism (Cor), wherein the MDH is expressed in the microbe, and wherein the MDH exhibits a Km of no more than 3 mM for methanol. Also provided are uses of the non-naturally occurring microbe for oxidizing methanol and producing a metabolite as well as the preparation of the non-naturally occurring microbe.
    Type: Grant
    Filed: January 13, 2017
    Date of Patent: May 5, 2020
    Assignee: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, William Brian Whitaker, Robert Kyle Bennett
  • Publication number: 20200017888
    Abstract: The present invention provides a method for increasing production of a metabolite by a non-naturally occurring methylotroph, comprising growing the non-naturally occurring methylotroph in a medium comprising methanol. Expression of one or more native genes in the non-naturally occurring methylotroph is changed. Also provided are the non-naturally occurring methylotroph and preparation thereof.
    Type: Application
    Filed: February 13, 2018
    Publication date: January 16, 2020
    Applicant: University of Delaware
    Inventors: Eleftherios T. Papoutsaki, Robert Kyle Bennett, Jacqueline Gonzalez, William Brian Whitaker, Maciek Antoniewicz
  • Publication number: 20190218505
    Abstract: Syntrophic co-cultures containing at least two microorganisms, wherein (a) at least one of the microorganisms is a solventogen able to metabolize biomass to produce metabolic byproduct(s) therefrom, (b) at least one of the microorganisms is a microorganism different from the solventogen, wherein the microorganism different from the primary solventogen depends on the metabolites and/or the metabolism of the primary solventogen for survival and growth and is able to fix or metabolize the metabolic byproducts produced by the solventogen to produce metabolic byproduct(s) therefrom, and (c) the solventogen is able to metabolize the metabolic byproduct(s) produced by the microorganism different from the solventogen to produce further metabolic byproducts, such as liquid fuels and commodity chemicals, as well as methods for using these syntrophic co-cultures to produce such products via fermentation, are disclosed.
    Type: Application
    Filed: August 23, 2017
    Publication date: July 18, 2019
    Applicant: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, Kamil Charubin, Alexander A. Mitkas
  • Publication number: 20190048310
    Abstract: A non-naturally occurring microbe capable of growing in a medium comprising methanol is provided. The methanol contributes to a significant percentage (e.g., at least 40%) of the carbon source for the non-naturally occurring microbe, which expresses heterologous methanol dehydrogenase (MDH) and heterologous ribulose monophosphate (RuMP) pathway enzymes. Methods for producing liquid fuels and chemicals by the non-naturally occurring microbe and methods for preparing the non-naturally occurring microbe are also provided.
    Type: Application
    Filed: July 23, 2018
    Publication date: February 14, 2019
    Applicant: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, Sergios Nicolaou, Alan Fast, Vasiliki Falara, Robert Kyle Bennett, William Brian Whitaker, Nicholas Richard Sandoval, Jacqueline Gonzalez, Maciek Antoniewicz
  • Publication number: 20190024040
    Abstract: The present invention provides a non-naturally occurring microbe capable of growing in a medium comprising methanol, comprising a heterologous polynucleotide encoding a heterologous methanol dehydrogenase (MDH) derived from a Corynebacterium organism (Cor), wherein the MDH is expressed in the microbe, and wherein the MDH exhibits a Km of no more than 3 mM for methanol. Also provided are uses of the non-naturally occurring microbe for oxidizing methanol and producing a metabolite as well as the preparation of the non-naturally occurring microbe.
    Type: Application
    Filed: January 13, 2017
    Publication date: January 24, 2019
    Applicant: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, William Brian Whitaker, Robert Kyle Bennett
  • Patent number: 10059920
    Abstract: A non-naturally occurring microbe capable of growing in a medium comprising methanol is provided. The methanol contributes to a significant percentage (e.g., at least 40%) of the carbon source for the non-naturally occurring microbe, which expresses heterologous methanol dehydrogenase (MDH) and heterologous ribulose monophosphate (RuMP) pathway enzymes. Methods for producing liquid fuels and chemicals by the non-naturally occurring microbe and methods for preparing the non-naturally occurring microbe are also provided.
    Type: Grant
    Filed: January 9, 2015
    Date of Patent: August 28, 2018
    Assignee: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, Sergios Nicolaou, Alan Fast, Vasiliki Falara, Robert Kyle Bennett, William Brian Whitaker, Nicholas Richard Sandoval, Jacqueline Gonzalez, Maciek Antoniewicz
  • Publication number: 20160333308
    Abstract: A non-naturally occurring microbe capable of growing in a medium comprising methanol is provided. The methanol contributes to a significant percentage (e.g., at least 40%) of the carbon source for the non-naturally occurring microbe, which expresses heterologous methanol dehydrogenase (MDH) and heterologous ribulose monophosphate (RuMP) pathway enzymes. Methods for producing liquid fuels and chemicals by the non-naturally occurring microbe and methods for preparing the non-naturally occurring microbe are also provided.
    Type: Application
    Filed: January 9, 2015
    Publication date: November 17, 2016
    Applicant: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, Sergios Nicolaou, Alan Fast, Vasiliki Falara, Robert Kyle Bennett, William Brian Whitaker, Nicholas Richard Sandoval, Jacqueline Gonzalez, Maciek Antoniewicz
  • Patent number: 9023618
    Abstract: The present invention relates to a recombinant E. coli exhibiting a complex phenotype, comprising one or more RNA polymerase subunit genes, one or more functional genes, and, optionally, one or more transcription factors from a heterologous prokaryote. Also provided are methods for screening such a recombinant E. coli.
    Type: Grant
    Filed: June 2, 2011
    Date of Patent: May 5, 2015
    Assignee: Eleftherios Papoutsakis and Stefan Gaida
    Inventors: Eleftherios T. Papoutsakis, Stefan Marcus Gaida
  • Publication number: 20140335623
    Abstract: The present invention relates to methods and compositions for engineering sporulating bacterial cells, particularly a cell of the class Clostridia. In particular, the present invention relates to the generation of sporulation deficient bacteria for the generation of industrial superior phenotypes.
    Type: Application
    Filed: May 9, 2014
    Publication date: November 13, 2014
    Applicant: NORTHWESTERN UNIVERSITY
    Inventors: Bryan P. Tracy, Carlos J. Paredes, Eleftherios T. Papoutsakis
  • Patent number: 8759070
    Abstract: The present invention relates a recombinant Clostridium expressing one or more heterologous Wood-Ljungdahl (WL) genes. In particular, the recombinant Clostridium produces a metabolite at an increased level. The present invention also relates to a method for producing a metabolite by the recombinant Clostridium.
    Type: Grant
    Filed: September 9, 2011
    Date of Patent: June 24, 2014
    Assignee: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, Mohab Ali Al-Hinai, Shawn William Jones, Dinesh Chanukya Indurthi, Daniel Knox Mitchell, Alan Fast
  • Publication number: 20140141516
    Abstract: The present invention relates to methods and compositions for engineering Clostridia species. In particular, embodiments of the present invention relate to the expression of recombinant resolvase proteins in Clostridia species.
    Type: Application
    Filed: November 27, 2013
    Publication date: May 22, 2014
    Applicant: NORTHWESTERN UNIVERSITY
    Inventors: Bryan P. Tracy, Eleftherios T. Papoutsakis
  • Publication number: 20120301964
    Abstract: The present invention relates to methods and compositions for engineering Clostridia species. In particular, embodiments of the present invention relate to the expression of recombinant resolvase proteins in Clostridia species.
    Type: Application
    Filed: May 18, 2012
    Publication date: November 29, 2012
    Applicant: NORTHWESTERN UNIVERSITY
    Inventors: Bryan P. Tracy, Eleftherios T. Papoutsakis
  • Publication number: 20120064587
    Abstract: The present invention relates a recombinant Clostridium expressing one or more heterologous Wood-Ljungdahl (WL) genes. In particular, the recombinant Clostridium produces a metabolite at an increased level. The present invention also relates to a method for producing a metabolite by the recombinant Clostridium.
    Type: Application
    Filed: September 9, 2011
    Publication date: March 15, 2012
    Applicant: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, Mohab Ali Al-Hinai, Shawn William Jones, Dinesh Chanukya Indurthi, Daniel Knox Mitchell, Alan Fast
  • Publication number: 20120035078
    Abstract: The present invention relates to a recombinant E. coli exhibiting a complex phenotype, comprising one or more RNA polymerase subunit genes, one or more functional genes, and, optionally, one or more transcription factors from a heterologous prokaryote. Also provided are methods for screening such a recombinant E. coli.
    Type: Application
    Filed: June 2, 2011
    Publication date: February 9, 2012
    Applicant: UNIVERSITY OF DELAWARE
    Inventors: Eleftherios T. Papoutsakis, Stefan Marcus Gaida
  • Publication number: 20110300553
    Abstract: The present invention relates to a recombinant E. coli exhibiting a complex phenotype, comprising three or more heterologous DNA fragments integrated into a chromosome of the recombinant E. coli bacterium. Also provided are methods for screening such a recombinant E. coli.
    Type: Application
    Filed: June 2, 2011
    Publication date: December 8, 2011
    Applicant: UNIVERSITY OF DELAWARE
    Inventors: Eleftherios T. Papoutsakis, Changhao Bi, Sergios Nicolaou
  • Publication number: 20110256604
    Abstract: Expression of the SpoIIE gene in a solventogenic Clostridium cell is silenced and sporulation is abolished. The cell exhibits increased production of a solvent, such as butanol, relative to a wild-type solventogenic Clostridium cell and can be used for industrial-scale production of a chemical product. A method includes silencing the SpoIIE gene of the Clostridium cell via a homologous recombination method in which a resolvase gene is expressed. Another method includes increasing solvent production in bacterial cells by inoculating the cells with an inoculum of exponentially growing cells, wherein expression of a sporulation gene in the bacterial cells is inhibited or silenced and the cells of the inoculum are in a post-exponential phase of growth prior to inoculation.
    Type: Application
    Filed: January 19, 2011
    Publication date: October 20, 2011
    Applicant: University of Delaware
    Inventors: Eleftherios T. Papoutsakis, Daniel R. Hess, Bryan P. Tracy
  • Publication number: 20100151544
    Abstract: The present invention relates to metabolic engineering issues related to flux determinism in core primary-metabolism pathways. In particular, the present invention relates to alcohol (e.g., butanol) production and selectivity, and related methods thereof.
    Type: Application
    Filed: July 22, 2009
    Publication date: June 17, 2010
    Applicant: NORTHWESTERN UNIVERSITY
    Inventors: Eleftherios T. Papoutsakis, W. Ryan Sillers
  • Publication number: 20100075424
    Abstract: The present invention relates to methods and compositions for engineering Clostridia species. In particular, embodiments of the present invention relate to the expression of recombinant resolvase proteins in Clostridia species.
    Type: Application
    Filed: May 8, 2009
    Publication date: March 25, 2010
    Applicant: NORTHWESTERN UNIVERSITY
    Inventors: Bryan P. Tracy, Eleftherios T. Papoutsakis