Patents by Inventor Elizabeth A. Bodie

Elizabeth A. Bodie has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 8304221
    Abstract: The present invention generally relates to hyphal growth in fungi and in particular describes the modulation of genes associated with hyphal growth in filamentous fungi. The present invention provides methods and systems for the production of proteins and/or chemicals from filamentous fungi which comprise modulation of genes associated with hyphal growth. Specifically, the present invention is directed to a full length cotA gene, its gene product and methods of use.
    Type: Grant
    Filed: June 15, 2010
    Date of Patent: November 6, 2012
    Assignee: Danisco US Inc.
    Inventors: Ali R. Akin, Elizabeth A. Bodie, Shirley M. Burrow, Nigel Dunn-Coleman, Geoffrey Turner, Michael Ward
  • Publication number: 20120244576
    Abstract: The present invention relates to the identification of novel nucleic acid sequences, designated herein as 7p, 8k, 7E, 9G, 8Q and 203, in a host cell which effect protein production. The present invention also provides host cells having a mutation or deletion of part or all of the gene encoding 7p, 8k, 7E, 9G, 8Q and 203, which are presented in FIG. 1, and are SEQ ID NOS.: 1-6, respectively. The present invention also provides host cells further comprising a nucleic acid encoding a desired heterologous protein such as an enzyme.
    Type: Application
    Filed: June 12, 2012
    Publication date: September 27, 2012
    Applicant: Danisco US Inc.
    Inventors: Elizabeth A. Bodie, Steve Kim
  • Patent number: 8216844
    Abstract: The present invention relates to the identification of novel nucleic acid sequences, designated herein as 7p, 8k, 7E, 9G, 8Q and 203, in a host cell which effect protein production. The present invention also provides host cells having a mutation or deletion of part or all of the gene encoding 7p, 8k, 7E, 9G, 8Q and 203, which are presented in FIG. 1, and are SEQ ID NOS.: 1-6, respectively. The present invention also provides host cells further comprising a nucleic acid encoding a desired heterologous protein such as an enzyme.
    Type: Grant
    Filed: August 28, 2007
    Date of Patent: July 10, 2012
    Assignee: Danisco US Inc.
    Inventors: Elizabeth A. Bodie, Steve Kim
  • Patent number: 8043828
    Abstract: Described herein is a modified EGII cellulase having the amino acid sequence shown in SEQ ID NO:1, compositions comprising the modified EGII and methods of use.
    Type: Grant
    Filed: January 11, 2008
    Date of Patent: October 25, 2011
    Assignee: Danisco US Inc.
    Inventors: Elizabeth A. Bodie, Andre Krouwer
  • Publication number: 20110059507
    Abstract: The present invention generally relates to hyphal growth in fungi and in particular describes the modulation of genes associated with hyphal growth in filamentous fungi. The present invention provides methods and systems for the production of proteins and/or chemicals from filamentous fungi which comprise modulation of genes associated with hyphal growth. Specifically, the present invention is directed to a full length cotA gene, its gene product and methods of use.
    Type: Application
    Filed: June 15, 2010
    Publication date: March 10, 2011
    Inventors: Ali R. Akin, Elizabeth A. Bodie, Shirley M. Burrow, Nigel Dunn-Coleman, Geoffrey Turner, Michael Ward
  • Publication number: 20110045526
    Abstract: The present invention provides methods for screening for a desired filamentous fungus that produces cellulase more efficiently and/or with increased specific activity. It also provides filamentous fungi that produce cellulase more efficiently.
    Type: Application
    Filed: June 10, 2008
    Publication date: February 24, 2011
    Inventors: Elizabeth A. Bodie, Edmund A. Larenas
  • Publication number: 20100279346
    Abstract: The present invention relates to the identification of novel nucleic acid sequences, designated herein as 7p,8k, 7E, 9G, 8Q and 203, in a host cell which effect protein production. The present invention also provides host cells having a mutation or deletion of part or all of the gene encoding 7p,8k, 7E, 9G, 8Q and 203, which are presented in FIG. 1, and are SEQ ID NOS.: 1-6, respectively. The present invention also provides host cells further comprising a nucleic acid encoding a desired heterologous protein such as an enzyme.
    Type: Application
    Filed: August 28, 2007
    Publication date: November 4, 2010
    Inventors: Elizabeth A. Bodie, Steve Kim
  • Publication number: 20100196954
    Abstract: Described herein is a modified EGII cellulase having the amino acid sequence shown in SEQ ID NO:1, compositions comprising the modified EGII and methods of use.
    Type: Application
    Filed: January 11, 2008
    Publication date: August 5, 2010
    Applicant: DANISCO US, INC., GENECOR DIVISION
    Inventors: Elizabeth A. Bodie, Andre Krouwer
  • Patent number: 7745189
    Abstract: The present invention generally relates to hyphal growth in fungi and in particular describes the modulation of genes associated with hyphal growth in filamentous fungi. The present invention provides methods and systems for the production of proteins and/or chemicals from filamentous fungi which comprise modulation of genes associated with hyphal growth. Specifically, the present invention is directed to a full length cotA gene, its gene product and methods of use.
    Type: Grant
    Filed: July 31, 2008
    Date of Patent: June 29, 2010
    Assignee: Genencor International, Inc.
    Inventors: Ali R. Akin, Elizabeth A. Bodie, Shirley M. Burrow, Nigel Dunn-Coleman, Geoffrey Turner, Michael Ward
  • Publication number: 20100129835
    Abstract: The present invention relates to a system for improving a strain of filamentous fungus that is useful in producing an enzyme of interest such as a cellulase. The invention involves generating genetic diversity in a strain of fungal cells, subjecting the population of cells to selection, and isolating the cells that overproduce the enzyme. The selection techniques involve culturing the population of cells in purified cellulose and/or at an elevated temperature that is adverse to production of the enzyme.
    Type: Application
    Filed: January 8, 2008
    Publication date: May 27, 2010
    Inventor: Elizabeth A. Bodie
  • Publication number: 20100093061
    Abstract: The invention relates to methods for obtaining improved strains of filamentous ascomycete fungus, such as Trichoderma reesei, and the product of said method. The method includes contacting ascomycete cells comprising a reporter gene construct with a mutagen, wherein said reporter gene construct comprises a promoter operably linked with a reporter gene; culturing said ascomycete cells under conditions that repress activity of the promoter; and isolating said ascomycete cells that produce the reporter in amounts detectably higher than ascomycete cells which have not been contacted with the mutagen.
    Type: Application
    Filed: December 18, 2007
    Publication date: April 15, 2010
    Inventor: Elizabeth A. Bodie
  • Publication number: 20090311752
    Abstract: The present invention relates to methods for improving the yield of microbial processes that use lignocellulose biomass as a nutrient source. The methods comprise conditioning a composition comprising lignocellulose biomass with an enzyme composition that comprises a phenol oxidizing enzyme. The conditioned composition can support a higher rate of growth of microorganisms in a process. In one embodiment, a laccase composition is used to condition lignocellulose biomass derived from non-woody plants, such as corn and sugar cane. The invention also encompasses methods for culturing microorganisms that are sensitive to inhibitory compounds in lignocellulose biomass. The invention further provides methods of making a product by culturing the production microorganisms in conditioned lignocellulose biomass.
    Type: Application
    Filed: December 17, 2007
    Publication date: December 17, 2009
    Inventors: Elizabeth A. Bodie, George England
  • Publication number: 20090093039
    Abstract: The present invention generally relates to hyphal growth in fungi and in particular describes the modulation of genes associated with hyphal growth in filamentous fungi. The present invention provides methods and systems for the production of proteins and/or chemicals from filamentous fungi which comprise modulation of genes associated with hyphal growth. Specifically, the present invention is directed to a full length cotA gene, its gene product and methods of use.
    Type: Application
    Filed: July 31, 2008
    Publication date: April 9, 2009
    Applicant: Genencor International, Inc.
    Inventors: Ali R. Akin, Elizabeth A. Bodie, Shirley Burrow, Nigel Dunn-Coleman, Geoffrey Turner, Michael Ward
  • Patent number: 7425450
    Abstract: The present invention generally relates to hyphal growth in fungi and in particular describes the modulation of genes associated with hyphal growth in filamentous fungi. The present invention provides methods and systems for the production of proteins and/or chemicals from filamentous fungi which comprise modulation of genes associated with hyphal growth. Specifically, the present invention is directed to a full length cotA gene, its gene product and methods of use.
    Type: Grant
    Filed: April 25, 2005
    Date of Patent: September 16, 2008
    Assignee: Genencor International, Inc.
    Inventors: Ali R. Akin, Elizabeth A. Bodie, Shirley M. Burrow, Nigel Dunn-Coleman, Geoffrey Turner, Michael Ward
  • Publication number: 20060024784
    Abstract: Disclosed herein are novel phenol oxidizing enzymes encoded by nucleic acid capable of hybridizing to the nucleic acid having the sequence as shown in SEQ ID NO:1 and in particular those obtainable from fungus. The present invention provides nucleic acid sequences and amino acid sequences from Bipolaris spicifera, Curvularia pallescens and Amerosporium atrum. The present invention provides expression vectors and host cells comprising nucleic acid encoding phenol oxidizing enzymes, methods for producing the phenol oxidizing enzyme as well as methods for constructing expression hosts.
    Type: Application
    Filed: May 17, 2005
    Publication date: February 2, 2006
    Inventors: Huaming Wang, Elizabeth Bodie
  • Publication number: 20050255513
    Abstract: The present invention generally relates to hyphal growth in fungi and in particular describes the modulation of genes associated with hyphal growth in filamentous fungi. The present invention provides methods and systems for the production of proteins and/or chemicals from filamentous fungi which comprise modulation of genes associated with hyphal growth. Specifically, the present invention is directed to a full length cotA gene, its gene product and methods of use.
    Type: Application
    Filed: April 25, 2005
    Publication date: November 17, 2005
    Inventors: Ali Akin, Elizabeth Bodie, Shirley Burrow, Nigel Dunn-Coleman, Geoffrey Turner, Michael Ward
  • Patent number: 6936449
    Abstract: The present invention generally relates to hyphal growth in fungi and in particular describes the modulation of genes associated with hyphal growth in filamentous fungi. The present invention provides methods and systems for the production of proteins and/or chemicals from filamentous fungi which comprise modulation of genes associated with hyphal growth. Specifically, the present invention is directed to a full length cotA gene, its gene product and methods of use.
    Type: Grant
    Filed: March 14, 2002
    Date of Patent: August 30, 2005
    Assignee: Genencor International, Inc.
    Inventors: Ali R. Akin, Elizabeth A. Bodie, Shirley Burrow, Nigel Dunn-Coleman, Geoffrey Turner, Michael Ward
  • Publication number: 20030045697
    Abstract: The present invention generally relates to hyphal growth in fungi and in particular describes the modulation of genes associated with hyphal growth in filamentous fungi. The present invention provides methods and systems for the production of proteins and/or chemicals from filamentous fungi which comprise modulation of genes associated with hyphal growth. Specifically, the present invention is directed to a full length cotA gene, its gene product and methods of use.
    Type: Application
    Filed: March 14, 2002
    Publication date: March 6, 2003
    Inventors: Ali R. Akin, Elizabeth A. Bodie, Shirley Burrow, Nigel Dunn-Coleman, Geoffrey Turner, Michael Ward
  • Publication number: 20020142423
    Abstract: Disclosed herein are novel phenol oxidizing enzymes encoded by nucleic acid capable of hybridizing to the nucleic acid having the sequence as shown in SEQ ID NO:1 and in particular those obtainable from fungus. The present invention provides nucleic acid sequences and amino acid sequences from Bipolaris spicifera, Curvularia pallescens and Amerosporium atrum.
    Type: Application
    Filed: February 19, 2002
    Publication date: October 3, 2002
    Inventors: Huaming Wang, Elizabeth A. Bodie
  • Patent number: 6399329
    Abstract: The invention relates to phenol oxidizing enzymes encoded by nucleic acids capable of hybridizing to the nucleic acid having the sequence shown in SEQ ID NO: 1 and in particular phenol oxidizing enzymes obtainable from fungus. Particularly provided are nucleic acid sequences and amino acids from Bipolaris spicifera, Curvularia pallescens and Amerosporium atrum, and expression vectors and host cells comprising said nucleic acid sequences encoding phenol oxidizing enzymes. Additionally, methods for producing the phenol oxidizing enzymes as well as methods for constructing expression hosts are disclosed.
    Type: Grant
    Filed: December 21, 1999
    Date of Patent: June 4, 2002
    Assignee: Genencor International, Inc.
    Inventors: Huaming Wang, Elizabeth A. Bodie