Abstract: Methods and systems are described that use 2D images and intraoral scans to generate and/or augment 3D models of dental site. In one example a method includes receiving a plurality of intraoral scans of a dental site generated by an intraoral scanner and a plurality of two-dimensional (2D) images of the dental site generated by the intraoral scanner, generating a three-dimensional (3D) surface of the dental site from the plurality of intraoral scans, determining a correspondence between points on the 3D surface and points in one or more 2D images of the plurality of 2D images, and performing one or more operations using the correspondence between the points on the 3D surface and the points on the one or more 2D images.