Patents by Inventor Fikri Y. Avci

Fikri Y. Avci has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240117019
    Abstract: Monoclonal antibodies and antigen binding fragments that specifically bind pneumococcal proteins, specifically pneumococcal histidine triad protein (PhtD) and pneumococcal surface protein A (PspA), are provided. Also disclosed are nucleic acid molecules encoding the antibody, antigen binding fragment, a VH or VL of the antibody, or a multipiece antibody including the VH and/or VL, vectors including these nucleic acid molecules, and host cells transfected with these vectors. Methods of inhibiting, treating, and detecting a Streptococcus pneumoniae infection are also provided.
    Type: Application
    Filed: February 7, 2022
    Publication date: April 11, 2024
    Applicant: University of Georgia Research Foundation, Inc.
    Inventors: Jarrod Mousa, Aaron Gingerich, Jiachen Huang, Fredejah Royer, Fikri Y. Avci
  • Publication number: 20240024435
    Abstract: Provided herein is a protein, referred to as a Pn3Pase protein, that degrades the capsular polysaccharide of serotype 3 Streptococcus pneumoniae. The disclosure includes a genetically modified cell that includes a Pn3Pase protein, and compositions that include the protein, the polynucleotide encoding the protein, the genetically modified cell, or a combination thereof. Also provided are methods for using a Pn3Pase protein, including methods for contacting a S. pneumoniae having a type III capsular polysaccharide with a Pn3Pase protein, increasing deposition of at least one complement component on the surface of a S. pneumoniae, treating an infection in a subject, treating a symptom in a subject, decreasing colonization of a subject by S. pneumoniae, or a combination thereof.
    Type: Application
    Filed: May 19, 2023
    Publication date: January 25, 2024
    Inventors: Fikri Y. Avci, Dustin Middleton, Amy Victoria Paschall
  • Publication number: 20230285519
    Abstract: The present disclosure includes catalytically active truncations of a protein, referred to as a PnSPase protein, that degrade the capsular polysaccharide of serotype 3 Streptococcus pneumoniae. The disclosure includes a genetically modified cell that includes a PnSPase protein of the present disclosure, and compositions that include the protein, the polynucleotide encoding the protein, the genetically modified cell, or a combination thereof. Also provided are methods for using a PnSPase protein of the present disclosure, including methods for contacting a S. pneumoniae having a type III capsular polysaccharide with a PnSPase protein, increasing deposition of at least one complement component on the surface of a S. pneumoniae, treating an infection in a subject, treating a symptom in a subject, decreasing colonization of a subject by S. pneumoniae, or a combination thereof.
    Type: Application
    Filed: July 16, 2021
    Publication date: September 14, 2023
    Inventors: Fikri Y. Avci, Paeton Wantuch
  • Publication number: 20230211004
    Abstract: The present disclosure provides peptides derived from CRM197 and Tetanus toxoid that can be used to generate an immune response in an individual. The present disclosure includes isolated peptides and multimers of isolated peptides. Also provided are compositions that include the isolated peptide or the multimer.
    Type: Application
    Filed: November 22, 2020
    Publication date: July 6, 2023
    Inventors: Paeton L. WANTUCH, Jeremy A. DUKE, Fikri Y. AVCI
  • Patent number: 11690900
    Abstract: Provided herein is a protein, referred to as a Pn3Pase protein, that degrades the capsular polysaccharide of serotype 3 Streptococcus pneumoniae. The disclosure includes a genetically modified cell that includes a Pn3Pase protein, and compositions that include the protein, the polynucleotide encoding the protein, the genetically modified cell, or a combination thereof. Also provided are methods for using a Pn3Pase protein, including methods for contacting a S. pneumoniae having a type III capsular polysaccharide with a Pn3Pase protein, increasing deposition of at least one complement component on the surface of a S. pneumoniae, treating an infection in a subject, treating a symptom in a subject, decreasing colonization of a subject by S. pneumoniae, or a combination thereof.
    Type: Grant
    Filed: August 13, 2018
    Date of Patent: July 4, 2023
    Assignee: UNIVERSITY OF GEORGIA RESEARCH FOUNDATION, INC.
    Inventors: Fikri Y. Avci, Dustin Middleton, Amy Victoria Paschall
  • Publication number: 20230008380
    Abstract: The present disclosure provides isolated polynucleotides encoding a mature Mycobacterium tuberculosis protein selected from Ag85A, Ag85B, and Ag85C, where the protein does not include a signal for glycosylation, such as a N-glycosylation consensus sequon. Also disclosed are M. tuberculosis proteins selected from Ag85A, Ag85B, and Ag85C that do not include a signal for glycosylation, such as a N-glycosylation consensus sequon, and/or are not glycosylated, and methods for using the polynucleotides and proteins.
    Type: Application
    Filed: December 8, 2020
    Publication date: January 12, 2023
    Applicant: UNIVERSITY OF GEORGIA RESEARCH FOUNDATION, INC.
    Inventors: Ahmet OZDILEK, Fikri Y. AVCI
  • Publication number: 20210308233
    Abstract: Provided herein is a protein, referred to as a Pn3Pase protein, that degrades the capsular polysaccharide of serotype 3 Streptococcus pneumoniae. The disclosure includes a genetically modified cell that includes a Pn3Pase protein, and compositions that include the protein, the polynucleotide encoding the protein, the genetically modified cell, or a combination thereof. Also provided are methods for using a Pn3Pase protein, including methods for contacting a S. pneumoniae having a type III capsular polysaccharide with a Pn3Pase protein, increasing deposition of at least one complement component on the surface of a S. pneumoniae, treating an infection in a subject, treating a symptom in a subject, decreasing colonization of a subject by S. pneumoniae, or a combination thereof.
    Type: Application
    Filed: August 13, 2018
    Publication date: October 7, 2021
    Inventors: Fikri Y. Avci, Dustin Middleton, Amy Victoria Paschall
  • Patent number: 8771995
    Abstract: Heparin is synthesized from a polysaccharide comprised of a 1-4 glycosidically linked alternating polymer of uronic acid and glucosamine residues, wherein the uronic acid is selected from iduronic and glucuronic acid, wherein the glucosamine is partially N-sulfated; by a series of selective reactions catalyzed by recombinant enzymes.
    Type: Grant
    Filed: March 12, 2012
    Date of Patent: July 8, 2014
    Assignees: The University of North Carolina at Chapel Hill, Rensselaer Polytechnic Institute
    Inventors: Jian Liu, Robert J. Linhardt, Fikri Y. Avci, Ava M. Munoz, Jinghua Chen
  • Publication number: 20120322114
    Abstract: Heparosan is sulfated at the iduronic acid residue by providing a reaction mixture comprising C5 epimerase to convert glucuronic acid to iduronic acid, and at least one O-sulfotransferase (OST) enzyme and 3?-phosphoadenosine 5?-phosphosulfate (PAPS).
    Type: Application
    Filed: March 12, 2012
    Publication date: December 20, 2012
    Inventors: Jian Liu, Robert J. Linhardt, Fikri Y. Avci, Eva M. Munoz, Jinghua Chen
  • Publication number: 20090197308
    Abstract: A method of sulfating a polysaccharide is provided. The method can include providing a reaction mixture comprising at least one O-sulfotransferase (OST) enzyme and 3?-phosphoadenosine 5?-phosphosulfate (PAPS); incubating a polysaccharide substrate with the reaction mixture, wherein production of the sulfated polysaccharide from the polysaccharide substrate is catalyzed by the OST enzyme with a conversion of the PAPS to adenosine 3?,5?-diphosphate (PAP); and providing a reaction condition which modifies PAP to reduce an inhibitory effect of PAP on the polysaccharide sulfation.
    Type: Application
    Filed: May 12, 2006
    Publication date: August 6, 2009
    Inventors: Jian Liu, Robert J. Linhardt, Fikri Y. Avci, Eva M. Munoz, Jinghua Chen