Patents by Inventor Frederic Paques

Frederic Paques has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 10066234
    Abstract: The invention relates to yeast cells modified to express a functional type I RuBisCO enzyme, and a class II phosphoribulokinase. The expression of these enzymes recreates a Calvin cycle in said yeasts in order to enable the yeasts to use carbon dioxide.
    Type: Grant
    Filed: January 16, 2015
    Date of Patent: September 4, 2018
    Assignees: Institut National de la Recherche Agronomique, Institut National Des Sciences Appliquees De Toulouse, Centre National de la Recherche Scientifique
    Inventors: Denis Pompon, Frederic Paques, Julie Lesage, Stephane Guillouet, Florence Bonnot, Jillian Marc, Nathalie Gorret, Carine Bideaux, Christel Boutonnet
  • Publication number: 20170002368
    Abstract: The invention relates to yeast cells modified to express a functional type I RuBisCO enzyme, and a class II phosphoribulokinase. The expression of these enzymes recreates a Calvin cycle in said yeasts in order to enable the yeasts to use carbon dioxide.
    Type: Application
    Filed: January 16, 2015
    Publication date: January 5, 2017
    Inventors: Denis Pompon, Frederic Paques, Julie Lesage, Stephane Guillouet, Florence Bonnot, Jillian Marc, Nathalie Gorret, Carine Bideaux, Christel Boutonnet
  • Patent number: 8715992
    Abstract: Method of preparing I-CreI meganuclease variants having a modified cleavage specificity, variants obtainable by said method and their applications either for cleaving new DNA target or for genetic engineering and genome engineering for non-therapeutic purposes. Nucleic acids encoding said variants, expression cassettes comprising said nucleic acids, vectors comprising said expression cassettes, cells or organisms, plants or animals except humans, transformed by said vectors.
    Type: Grant
    Filed: March 16, 2012
    Date of Patent: May 6, 2014
    Assignee: Cellectis
    Inventors: Philippe Duchateau, Frederic Paques
  • Publication number: 20140121115
    Abstract: New rare-cutting endonucleases, also called custom-made meganucleases, which recognize and cleave a specific nucleotide sequence, derived polynucleotide sequences, recombinant vector cell, animal, or plant comprising said polynucleotide sequences, process for producing said rare-cutting endonucleases and any use thereof, more particularly, for genetic engineering, antiviral therapy and gene therapy.
    Type: Application
    Filed: December 21, 2012
    Publication date: May 1, 2014
    Applicant: Cellectis
    Inventors: Sylvain Arnould, Sylvia Bruneau, Jean-Pierre Cabaniols, Patrick Chames, Andre Choulika, Phillipe Duchateau, Jean-Charles Epinat, Agnes Gouble, Emmanuel Lacroix, Frederic Paques, Christophe Perez-Michaut, Julianne Smith, Davie Sourdive
  • Patent number: 8697395
    Abstract: Use of meganucleases for cleaving DNA in a non-human or an isolated human cell and, in some instances, inducing homologous recombination in said cells and to its application for genome engineering and gene therapy.
    Type: Grant
    Filed: July 24, 2012
    Date of Patent: April 15, 2014
    Assignee: Cellectis S.A.
    Inventors: Sylvain Arnould, Patrick Chames, Phillippe Duchateau, Jean-Charles Epinat, Emmanuel Lacroix, Frederic Paques
  • Patent number: 8624000
    Abstract: A monomer of an I-CreI meganuclease variant wherein said monomer comprises mutations in the amino acid sequence of SEQ ID NO: 34, wherein said mutations include, (i) at least one and up to five amino acid substitutions from residue Q44 to residue R70, said substitutions selected from the group consisting of substitutions at positions Q44, T46, Y66, R68 and R7; and (ii) at least one and up to six amino acid substitutions from residue Q26 to residue Q38 said substitutions selected from the group consisting of substitutions at positions Q26, K28, N30, S32, Y33 and Q38, and wherein said monomer when in dimeric form binds and cleaves a DNA target sequence. Said dimeric forms include homodimeric, heterodimeric and single-chain I-CreI meganuclease variants.
    Type: Grant
    Filed: May 31, 2012
    Date of Patent: January 7, 2014
    Assignee: Cellectis S.A.
    Inventors: Sylvain Arnould, Patrick Chames, Phillippe Duchateau, Jean-Charles Epinat, Emmanuel Lacroix, Frederic Paques
  • Publication number: 20130326644
    Abstract: A LAGLIDADG homing endonuclease variant, having mutations in two separate subdomains, each binding a distinct part of a modified DNA target half-site, said LAGLIDADG homing endonuclease variant being able to cleave a chimeric DNA target sequence comprising the nucleotides bound by each subdomain. Use of said herodimeric meganuclease and derived products for genetic engineering, genome therapy and antiviral therapy.
    Type: Application
    Filed: June 13, 2013
    Publication date: December 5, 2013
    Applicant: CELLECTIS, S.A.
    Inventor: Frederic PAQUES
  • Patent number: 8530214
    Abstract: The present invention relates to a polynucleotide encoding a monomer of an I-CreI variant said monomer comprising mutations in the amino acid sequence of SEQ ID NO: 34, wherein said mutations include: (i) at least one and up to eleven amino acid substitutions from residue S22 to Q44 said substitutions selected from the group consisting of substitutions at positions I24, Q26, K28, N30, S32, Y33, Q38, S40 and T42; and (ii) at least one and up to six amino acid substitutions from residue Y66 to I77 said substitutions selected from the group consisting of substitutions at positions Y66, R68, R70, V73 and I77; and wherein said monomer when in dimeric form binds and cleaves DNA.
    Type: Grant
    Filed: June 3, 2011
    Date of Patent: September 10, 2013
    Assignee: Cellectis S.A.
    Inventors: Sylvain Arnould, Patrick Chames, Philippe Duchateau, Jean-Charles Epinat, Emmanuel Lacroix, Frederic Paques
  • Publication number: 20120322689
    Abstract: The present invention provides a method for detecting nucleic acid cleavage induced by a modified rare-cutting endonuclease derived from an initial rare-cutting endonuclease, said modified rare-cutting endonuclease being able to cleave a DNA target sequence, which may be different from the recognition and cleavage site of the initial rare-cutting endonuclease. In one embodiment of the invention expression of a marker gene is used as an indicator of target DNA cleavage.
    Type: Application
    Filed: June 15, 2012
    Publication date: December 20, 2012
    Applicant: CELLECTIS S.A.
    Inventors: Jean-Charles Epinat, Christophe Perez-Michaut, Frederic Paques
  • Publication number: 20120288941
    Abstract: Use of meganucleases for inducing homologous recombination ex vivo and in toto in vertebrate somatic tissues and to its application for genome engineering and gene therapy.
    Type: Application
    Filed: July 24, 2012
    Publication date: November 15, 2012
    Applicant: CELLECTIS S.A.
    Inventors: Sylvain Arnould, Patrick Chames, Phillippe Duchateau, Jean-Charles Epinat, Emmanuel Lacroix, Frederic Paques
  • Publication number: 20110287513
    Abstract: A single chain homing endonuclease, comprising a first variant of I-CreI having the amino acid sequence of accession number pdb 1g9y and a second variant of I-CreI variant having the amino acid sequence of accession number pdb 1g9y in a single polypeptide.
    Type: Application
    Filed: June 3, 2011
    Publication date: November 24, 2011
    Inventors: Sylvain Arnould, Sylvia Bruneau, Jean-Pierre Cabaniols, Patrick Chames, Andre Choulika, Philippe Duchateau, Jean-Charles Epinat, Agnes Gouble, Emmanuel Lacroix, Frederic Paques, Christophe Perez-Michaut, Julianne Smith, David Sourdive
  • Publication number: 20110207199
    Abstract: Method to generate and select a meganuclease having at least two altered characteristics in comparison to a parent meganuclease, comprising the steps: a. constructing from a parent meganuclease, a first series of variants which differ from said parent meganuclease by at least one acid amino substitution; b. screening the variants from said first series of step a. and selecting those which have a first altered characteristic; c. constructing from the selected variants of step b. a second series of variants having a least one other amino acid substitution; d. screening the variants from said series of step b. and selecting those which have said first altered characteristic and a second altered characteristic. Polypeptide obtained from said method.
    Type: Application
    Filed: February 9, 2009
    Publication date: August 25, 2011
    Applicant: CELLECTIS
    Inventors: Frederic Paques, Sylvestre Grizot, Philippe Duchateau
  • Publication number: 20110191870
    Abstract: A method for engineering I-CreI homing endonuclease variants able to cleave mutant I-CreI sites having variation in positions ±8 to ±10. A I-CreI homing endonuclease variant obtainable by said method, a vector encoding said variant, a cell, an animal or a plant modified by said vector. Use of said I-CreI endonuclease variant and derived products for genetic engineering, genome therapy and antiviral therapy.
    Type: Application
    Filed: October 3, 2006
    Publication date: August 4, 2011
    Applicant: CELLECTIS
    Inventor: Frederic Paques
  • Publication number: 20110158974
    Abstract: Heterodimeric meganuclease comprising two domains of different meganucleases which are in two separate polypeptides, said heterodimeric meganuclease being able to cleave a chimeric DNA target sequence comprising one different half of each parent meganuclease DNA target sequence. Use of said herodimeric meganuclease and derived products for genetic engineering, genome therapy and antiviral therapy.
    Type: Application
    Filed: March 15, 2006
    Publication date: June 30, 2011
    Applicant: Cellectis
    Inventors: Philippe Duchateau, Frederic Paques
  • Publication number: 20110151539
    Abstract: A single chain homing endonuclease, comprising a first variant of I-CreI having the amino acid sequence of accession number pdb 1g9y and a second variant of I-CreI variant having the amino acid sequence of accession number pdb 1g9y in a single polypeptide.
    Type: Application
    Filed: February 4, 2011
    Publication date: June 23, 2011
    Inventors: Sylvain Arnould, Sylvia Bruneau, Jean-Pierre Cabaniols, Patrick Chames, André Choulika, Philippe Duchateau, Jean-Charles Epinat, Agnes Gouble, Emmanuel Lacroix, Frederic Paques, Christophe Perez-Michaut, Julianne Smith, David Sourdive
  • Publication number: 20110072527
    Abstract: Method of preparing I-CreI meganuclease variants having a modified cleavage specificity, variants obtainable by said method and their applications either for cleaving new DNA target or for genetic engineering and genome engineering for non-therapeutic purposes. Nucleic acids encoding said variants, expression cassettes comprising said nucleic acids, vectors comprising said expression cassettes, cells or organisms, plants or animals except humans, transformed by said vectors.
    Type: Application
    Filed: August 20, 2010
    Publication date: March 24, 2011
    Applicant: CELLECTIS
    Inventors: Philippe DUCHATEAU, Frederic Paques
  • Patent number: 7897372
    Abstract: Method of preparing 1-CreI meganuclease variants having a modified cleavage specificity, variants obtainable by said method and their applications either for cleaving new DNA target or for genetic engineering and genome engineering for non-therapeutic purposes. Nucleic acids encoding said variants, expression cassettes comprising said nucleic acids, vectors comprising said expression cassettes, cells or organisms, plants or animals except humans, transformed by said vectors.
    Type: Grant
    Filed: March 15, 2006
    Date of Patent: March 1, 2011
    Assignee: Cellectis
    Inventors: Philippe Duchateau, Frederic Paques
  • Patent number: 7842489
    Abstract: A single chain homing endonuclease, comprising a first variant of I-CreI having the amino acid sequence of accession number pdb 1g9y (SEQ ID NO: 23 is residues 1-153 of pdb Ig9y) and a second variant of I-CreI variant having the amino acid sequence of accession number pdb 1g9y (SEQ ID NO: 23 is residues 1-153 of pdb Ig9y) in a single polypeptide.
    Type: Grant
    Filed: February 23, 2010
    Date of Patent: November 30, 2010
    Assignee: Cellectis
    Inventors: Sylvain Arnould, Sylvia Bruneau, Jean-Pierre Cabaniols, Patrick Chames, Andre Choulika, Philippe Duchateau, Jean-Charles Epinat, Agnes Gouble, Emmanuel Lacroix, Frederic Paques, Christophe Perez-Michaut, Julianne Smith, David Sourdive
  • Publication number: 20100021448
    Abstract: Method of preparing 1-CreI meganuclease variants having a modified cleavage specificity, variants obtainable by said method and their applications either for cleaving new DNA target or for genetic engineering and genome engineering for non-therapeutic purposes. Nucleic acids encoding said variants, expression cassettes comprising said nucleic acids, vectors comprising said expression cassettes, cells or organisms, plants or animals except humans, transformed by said vectors.
    Type: Application
    Filed: March 15, 2006
    Publication date: January 28, 2010
    Applicant: CELLECTIS
    Inventors: Philippe Duchateau, Frederic Paques
  • Publication number: 20090220476
    Abstract: Provided is a LAGLIDADG (SEQ ID NO: 50) homing endonuclease variant having mutations in two separate subdomains, each binding to a distinct part of a modified DNA target half-site, the LAGLIDADG (SEQ ID NO: 50) homing endonuclease variant being able to cleave a chimeric DNA target sequence having nucleotides bound by each subdomain. A heterodimeric meganuclease and derived products for genetic engineering, genome therapy and antiviral therapy are also provided.
    Type: Application
    Filed: October 3, 2006
    Publication date: September 3, 2009
    Applicant: CELLECTIS
    Inventor: Frederic Paques