Patents by Inventor Himanshu SETHI

Himanshu SETHI has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 12024738
    Abstract: The invention provides methods for detecting single nucleotide variants in breast cancer, bladder cancer, or colorectal cancer. Additional methods and compositions, such as reaction mixtures and solid supports comprising clonal populations of nucleic acids, are provided.
    Type: Grant
    Filed: April 12, 2019
    Date of Patent: July 2, 2024
    Assignee: Natera, Inc.
    Inventors: Bernhard Zimmermann, Raheleh Salari, Ryan Swenerton, Hsin-Ta Wu, Himanshu Sethi
  • Publication number: 20230332221
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Application
    Filed: December 5, 2022
    Publication date: October 19, 2023
    Applicant: Natera, Inc.
    Inventors: Bernhard ZIMMERMANN, Ryan SWENERTON, Matthew RABINOWITZ, Styrmir SIGURJONSSON, George GEMELOS, Apratim GANGULY, Himanshu SETHI
  • Patent number: 11530442
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Grant
    Filed: May 21, 2019
    Date of Patent: December 20, 2022
    Assignee: Natera, Inc.
    Inventors: Bernhard Zimmermann, Ryan Swenerton, Matthew Rabinowitz, Styrmir Sigurjonsson, George Gemelos, Apratim Ganguly, Himanshu Sethi
  • Patent number: 11519028
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Grant
    Filed: October 5, 2021
    Date of Patent: December 6, 2022
    Assignee: Natera, Inc.
    Inventors: Bernhard Zimmermann, Ryan Swenerton, Matthew Rabinowitz, Styrmir Sigurjonsson, George Gemelos, Apratim Ganguly, Himanshu Sethi
  • Publication number: 20220356530
    Abstract: The invention provides methods for determining the growth rate of ctDNA, comprising (a) sequencing nucleic acids isolated from a biological sample of a cancer patient to identify patient-specific cancer mutations; (b) quantify the amount of ctDNA in a first liquid biopsy sample collected from the cancer patient by performing a multiplex amplification reaction to amplify target loci from cfDNA isolated from the first liquid biopsy sample, wherein each target locus spans at least one patient-specific cancer mutation, and sequencing the amplified target loci to identify the patient-specific cancer mutations and quantify the amount of ctDNA in the first liquid biopsy sample; (c) quantify the amount of ctDNA in a second liquid biopsy sample collected from the cancer patient by performing a multiplex amplification reaction to amplify target loci from cfDNA isolated from the second liquid biopsy sample, wherein each target locus spans at least one patient-specific cancer mutation, and sequencing the amplified target
    Type: Application
    Filed: April 20, 2022
    Publication date: November 10, 2022
    Applicant: Natera, Inc.
    Inventors: Shruti SHARMA, Bernhard ZIMMERMANN, Himanshu SETHI, Alexey ALESHIN, Svetlana SHCHEGROVA
  • Publication number: 20220056509
    Abstract: The invention provides methods for detecting single nucleotide variants in breast cancer, bladder cancer, or colorectal cancer. Additional methods and compositions, such as reaction mixtures and solid supports comprising clonal populations of nucleic acids, are provided.
    Type: Application
    Filed: August 30, 2021
    Publication date: February 24, 2022
    Applicant: Natera, Inc.
    Inventors: Bernhard ZIMMERMANN, Raheleh SALARI, Ryan SWENERTON, Hsin-Ta WU, Himanshu SETHI
  • Publication number: 20220025455
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Application
    Filed: October 5, 2021
    Publication date: January 27, 2022
    Applicant: Natera, Inc.
    Inventors: Bernhard ZIMMERMANN, Ryan SWENERTON, Matthew RABINOWITZ, Styrmir SIGURJONSSON, George GEMELOS, Apratim GANGULY, Himanshu SETHI
  • Patent number: 11168362
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Grant
    Filed: May 21, 2019
    Date of Patent: November 9, 2021
    Assignee: Natera, Inc.
    Inventors: Bernhard Zimmermann, Ryan Swenerton, Matthew Rabinowitz, Styrmir Sigurjonsson, George Gemelos, Apratim Ganguly, Himanshu Sethi
  • Patent number: 11066703
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Grant
    Filed: May 21, 2019
    Date of Patent: July 20, 2021
    Assignee: Natera, Inc.
    Inventors: Bernhard Zimmermann, Ryan Swenerton, Matthew Rabinowitz, Styrmir Sigurjonsson, George Gemelos, Apratim Ganguly, Himanshu Sethi
  • Publication number: 20210071246
    Abstract: Disclosed here is a composition comprising a primer that is (a) a loopable primer comprising a target-specific section, an adaptor section, and a stem-forming section, wherein the stem-forming section is hybridizable to a portion of the target-specific section to form a stem structure, or (b) a split primer comprising a first target-specific section, a second target-specific section, and an adaptor section positioned between the first target-specific section and the second target-specific section, or (c) a split-loopable primer comprising a first target-specific section, a second target-specific section, a stem-forming section positioned between the first target-specific section and the second target-specific section, and an adaptor section, or comprising a first adaptor section, a second adaptor section, a stem-forming section positioned between the first adaptor section and the second adaptor section, and a target-specific section.
    Type: Application
    Filed: January 11, 2019
    Publication date: March 11, 2021
    Applicant: Natera, Inc.
    Inventors: Bernhard ZIMMERMANN, Ryan SWENERTON, Scott DASHNER, Fei LU, Himanshu SETHI
  • Patent number: 10577650
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Grant
    Filed: September 26, 2017
    Date of Patent: March 3, 2020
    Assignee: Natera, Inc.
    Inventors: Bernhard Zimmermann, Ryan Swenerton, Matthew Rabinowitz, Styrmir Sigurjonsson, George Gemelos, Apratim Ganguly, Himanshu Sethi
  • Patent number: 10533219
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Grant
    Filed: September 26, 2017
    Date of Patent: January 14, 2020
    Assignee: Natera, Inc.
    Inventors: Bernhard Zimmermann, Ryan Swenerton, Matthew Rabinowitz, Styrmir Sigurjonsson, George Gemelos, Apratim Ganguly, Himanshu Sethi
  • Publication number: 20190316184
    Abstract: The invention provides methods for detecting single nucleotide variants in breast cancer, bladder cancer, or colorectal cancer. Additional methods and compositions, such as reaction mixtures and solid supports comprising clonal populations of nucleic acids, are provided.
    Type: Application
    Filed: April 12, 2019
    Publication date: October 17, 2019
    Applicant: Natera, Inc.
    Inventors: Bernhard ZIMMERMANN, Raheleh SALARI, Ryan SWENERTON, Hsin-Ta WU, Himanshu SETHI
  • Publication number: 20190309359
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Application
    Filed: May 21, 2019
    Publication date: October 10, 2019
    Applicant: Natera, Inc.
    Inventors: Bernhard ZIMMERMANN, Ryan SWENERTON, Matthew RABINOWITZ, Styrmir SIGURJONSSON, George GEMELOS, Apratim GANGULY, Himanshu SETHI
  • Patent number: 10011870
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Grant
    Filed: December 7, 2016
    Date of Patent: July 3, 2018
    Assignee: Natera, Inc.
    Inventors: Bernhard Zimmermann, Ryan Swenerton, Matthew Rabinowitz, Styrmir Sigurjonsson, George Gemelos, Apratim Ganguly, Himanshu Sethi
  • Publication number: 20180155776
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Application
    Filed: September 26, 2017
    Publication date: June 7, 2018
    Applicant: Natera, Inc.
    Inventors: Bernhard ZIMMERMANN, Ryan SWENERTON, Matthew RABINOWITZ, Styrmir SIGURJONSSON, George GEMELOS, Apratim GANGULY, Himanshu SETHI
  • Publication number: 20180155779
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Application
    Filed: December 7, 2016
    Publication date: June 7, 2018
    Applicant: Natera, Inc.
    Inventors: Bernhard ZIMMERMANN, Ryan SWENERTON, Matthew RABINOWITZ, Styrmir SIGURJONSSON, George GEMELOS, Apratim GANGULY, Himanshu SETHI
  • Publication number: 20180155775
    Abstract: The present disclosure provides methods and compositions for sequencing nucleic acid molecules and identifying individual sample nucleic acid molecules using Molecular Index Tags (MITs). Furthermore, reaction mixtures, kits, and adapter libraries are provided.
    Type: Application
    Filed: September 26, 2017
    Publication date: June 7, 2018
    Applicant: Natera, Inc.
    Inventors: Bernhard ZIMMERMANN, Ryan SWENERTON, Matthew RABINOWITZ, Styrmir SIGURJONSSON, George GEMELOS, Apratim GANGULY, Himanshu SETHI