Patents by Inventor Isaac Stoner

Isaac Stoner has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20230193352
    Abstract: The present invention provides, among other things, methods of detecting target nucleic acid, comprising steps of: a) contacting a sample with one or more capturing probes, each comprising at least one target capturing sequence, under conditions that permit the one or more capturing probes to capture one or more target nucleic acids in the sample; b) amplifying the captured one or more target nucleic acids in a reaction mixture comprising a detectable entity such that the amplified one or more target nucleic acids are labeled with the detectable entity; c) incubating amplification product with a plurality of re-capturing probes such that the amplified one or more target nucleic acids are re-captured by the plurality of the re-capturing probes; and d) detecting signal generated by detectable entity associated with the re-captured amplified one or more target nucleic acids, wherein the presence and/or abundance of the detectable signal indicates the presence and/or abundance of the one or more target nucleic ac
    Type: Application
    Filed: July 11, 2022
    Publication date: June 22, 2023
    Applicant: FIREFLY BIOWORKS, INC.
    Inventors: Daniel C. PREGIBON, Isaac Stoner, Anthony FUSCO, Michael R. TACKETT
  • Publication number: 20230123911
    Abstract: Disclosed are immune cell-selective small molecule IMPDH inhibitor compounds and methods of their synthesis and use to treat proliferative disorders.
    Type: Application
    Filed: January 29, 2021
    Publication date: April 20, 2023
    Inventors: Nathaniel SHERDEN, SHEN YU, LUIS CASTILLO-MENENDEZ, ISAAC STONER, BRENT CEZAIRLIYAN
  • Publication number: 20230119606
    Abstract: Disclosed are immune cell-selective small molecule compounds that modulate certain immune cell-specific receptors and enzymes, and methods of their synthesis and use to treat proliferative disorders.
    Type: Application
    Filed: January 29, 2021
    Publication date: April 20, 2023
    Inventors: Nathaniel Sherden, Shen Yu, Isaac Stoner
  • Patent number: 10890581
    Abstract: The present invention provides, among other things, methods, compositions and systems for highly efficient, robust, multiplex analysis of biomolecules based on substrate-mediated compartmentalization in conjunction with controlled release of assay reagents for interference-free detection of biomolecules.
    Type: Grant
    Filed: May 22, 2015
    Date of Patent: January 12, 2021
    Assignee: FIREFLY BIOWORKS, INC.
    Inventors: Isaac Stoner, Timothy Erps, Daniel Pregibon, Jessica Dawn Tytell, Andreas Windemuth, Graeme Doran
  • Publication number: 20180052154
    Abstract: The present invention provides, among other things, methods, compositions and systems for highly efficient, robust, multiplex analysis of biomolecules based on substrate-mediated compartmentalization in conjunction with controlled release of as-say reagents for interference-free detection of biomolecules.
    Type: Application
    Filed: May 22, 2015
    Publication date: February 22, 2018
    Inventors: Isaac STONER, Timothy ERPS, Daniel PREGIBON, Jessica Dawn TYTELL, Andreas WINDEMUTH, Graeme DORAN
  • Publication number: 20160333398
    Abstract: The present invention provides, among other things, methods and compositions for encoding a substrate for detecting and quantifying target nucleic acids.
    Type: Application
    Filed: February 12, 2016
    Publication date: November 17, 2016
    Inventors: Daniel C. Pregibon, Isaac Stoner, Andreas Windemuth, Timothy Erps
  • Patent number: 9476101
    Abstract: The present invention provides, among other things, methods and systems for characterizing multifunctional objects using a flow-through device, such as, a flow cytometer. In some embodiments, an inventive method according to the present invention includes one more steps of (a) interrogating a plurality of objects (e.g., particles), wherein each individual object (e.g., particle) comprises one or more interrogation regions detectable as a sequence of events; (b) recording multiple events, wherein each individual event corresponds to each individual interrogation region detectable above a pre-determined triggering threshold; (c) grouping the recorded multiple events, and (d) characterizing the plurality of objects based on the grouped events.
    Type: Grant
    Filed: June 7, 2011
    Date of Patent: October 25, 2016
    Assignee: Firefly Bioworks, Inc.
    Inventors: Daniel C. Pregibon, Davide M. Marini, Isaac Stoner, Andreas Windemuth, Timothy Erps
  • Patent number: 9290816
    Abstract: The present invention provides, among other things, methods and compositions for encoding a substrate for detecting and quantifying target nucleic acids.
    Type: Grant
    Filed: November 19, 2013
    Date of Patent: March 22, 2016
    Assignee: Firefly Bioworks Inc.
    Inventors: Daniel C. Pregibon, Isaac Stoner, Andreas Windemuth, Timothy Erps
  • Publication number: 20160060682
    Abstract: The present invention provides, among other things, methods of detecting target nucleic acid, comprising steps of: a) contacting a sample with one or more capturing probes, each comprising at least one target capturing sequence, under conditions that permit the one or more capturing probes to capture one or more target nucleic acids in the sample; b) amplifying the captured one or more target nucleic acids in a reaction mixture comprising a detectable entity such that the amplified one or more target nucleic acids are labeled with the detectable entity; c) incubating amplification product with a plurality of re-capturing probes such that the amplified one or more target nucleic acids are re-captured by the plurality of the re-capturing probes; and d) detecting signal generated by detectable entity associated with the re-captured amplified one or more target nucleic acids, wherein the presence and/or abundance of the detectable signal indicates the presence and/or abundance of the one or more target nucleic ac
    Type: Application
    Filed: April 25, 2014
    Publication date: March 3, 2016
    Inventors: Daniel C. Pregibon, Isaac Stoner, Anthony Fusco, Michael R. Tackett
  • Publication number: 20150278901
    Abstract: In certain embodiments, the invention relates to systems, methods, and apparatus that allow a purchaser to customize a test kit based upon a literature search. A processor receives one or more search terms entered by a user and constructs a query comprising the one or more search terms. The processor obtains from one or more literature repositories a plurality of search results responsive to the query. The processor identifies one or more domain terms (relating to a scientific domain) within the plurality of search results. The processor prioritizes the one or more scientific domain terms based in part upon frequency of occurrence within the plurality of search results, and selects one or more order components relating to a tangible product, each order component relating to a respective scientific domain term of the one or more scientific domain terms. The order information is displayed to a user.
    Type: Application
    Filed: November 5, 2013
    Publication date: October 1, 2015
    Inventors: Andreas Windemuth, Isaac Stoner, Davide Marini, Daniel Pregibon
  • Publication number: 20150005198
    Abstract: The present invention provides, among other things, methods and compositions for encoding a substrate for detecting and quantifying target nucleic acids.
    Type: Application
    Filed: November 19, 2013
    Publication date: January 1, 2015
    Applicant: Firefly Bioworks, Inc.
    Inventors: Daniel C. Pregibon, Isaac Stoner, Andreas Windemuth, Timothy Erps
  • Patent number: 8609337
    Abstract: The present invention provides, among other things, methods and compositions for encoding a substrate for detecting and quantifying target nucleic acids.
    Type: Grant
    Filed: August 7, 2012
    Date of Patent: December 17, 2013
    Assignee: Firefly BioWorks, Inc.
    Inventors: Daniel C. Pregibon, Isaac Stoner, Andreas Windemuth, Timothy Erps
  • Publication number: 20130210653
    Abstract: The present invention provides, among other things, methods and systems for characterizing multifunctional objects using a flow-through device, such as, a flow cytometer. In some embodiments, an inventive method according to the present invention includes one more steps of (a) interrogating a plurality of objects (e.g., particles), wherein each individual object (e.g., particle) comprises one or more interrogation regions detectable as a sequence of events; (b) recording multiple events, wherein each individual event corresponds to each individual interrogation region detectable above a pre-determined triggering threshold; (c) grouping the recorded multiple events, and (d) characterizing the plurality of objects based on the grouped events.
    Type: Application
    Filed: June 7, 2011
    Publication date: August 15, 2013
    Applicant: FIREFLY BIOWORKS, INC.
    Inventors: Daniel C. Pregibon, Davide M. Marini, Isaac Stoner, Andreas Windemuth, Timothy Erps
  • Publication number: 20120316082
    Abstract: The present invention provides, among other things, methods and compositions for detecting and quantifying target nucleic acids via post-hybridization labeling.
    Type: Application
    Filed: August 7, 2012
    Publication date: December 13, 2012
    Applicant: FIREFLY BIOWORKS, INC.
    Inventors: Daniel C. Pregibon, Isaac Stoner, Andreas Windemuth, Timothy Erps
  • Publication number: 20120309651
    Abstract: The present invention provides, among other things, methods and compositions for encoding a substrate for detecting and quantifying target nucleic acids.
    Type: Application
    Filed: August 7, 2012
    Publication date: December 6, 2012
    Applicant: FIREFLY BIOWORKS, INC.
    Inventors: Daniel C. Pregibon, Isaac Stoner, Andreas Windemuth, Timothy Erps