Patents by Inventor J. Mark Weber

J. Mark Weber has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20100143976
    Abstract: A method of increasing production of a methylmalonyl-CoA derivative in a bacterium is disclosed that includes providing a bacterium that produces a methylmalonyl-CoA derivative in which methylmalonyl-CoA mutase function has been inhibited and culturing the bacterium in a medium containing an effective amount of methylmalonyl-CoA or a precursor thereof to increase the production of the methylmalonyl-CoA derivative by the bacterium. The production of the methylmalonyl-CoA derivative is increased when compared to production of the methylmalonyl-CoA derivative by the bacterium when cultured in a medium without the effective amount of methylmalonyl-CoA or a precursor thereof.
    Type: Application
    Filed: November 9, 2009
    Publication date: June 10, 2010
    Applicant: FERMALOGIC, Inc.
    Inventors: J. Mark WEBER, Andrew R. Reeves, Igor A. Brikun, William Henry Cernota
  • Publication number: 20100047899
    Abstract: A process of increasing the cellular production of biologically active compounds is provided. The process is particularly useful for increasing antibiotic production by bacterial cells. The process includes the step of inhibiting the activity of methylmalonyl-CoA mutase.
    Type: Application
    Filed: May 19, 2009
    Publication date: February 25, 2010
    Inventors: J. Mark Weber, Andrew R. Reeves, Igor A. Brikun, William Henry Cernota
  • Patent number: 7638306
    Abstract: A process of increasing the cellular production of biologically active compounds is provided. The process is particularly useful for increasing antibiotic production by bacterial cells. The process includes the step of inhibiting the activity of methylmalonyl-CoA mutase.
    Type: Grant
    Filed: August 8, 2003
    Date of Patent: December 29, 2009
    Assignee: Fermalogic, Inc.
    Inventors: J. Mark Weber, Andrew R. Reeves, Igor A. Brikun, William Henry Cernota
  • Publication number: 20080044861
    Abstract: A method for obtaining improved yields of isoflavones from spent fermentation beer produced by Actinomycetes grown on leguminous plant materials is demonstrated. This method involves conversion of isoflavone biotransformation products to isoflavone aglycones followed by isolation of the isoflavone aglycones. Formation of the biotransformation products had previously limited the production of isoflavone aglycones in these Actinomycete fermentations.
    Type: Application
    Filed: August 15, 2006
    Publication date: February 21, 2008
    Applicant: FERMALOGIC, INC.
    Inventor: J. Mark Weber
  • Patent number: 6420177
    Abstract: The present invention relates to a method of improving the strain used for the production of erythromycin through the disruption of the melA gene.
    Type: Grant
    Filed: September 15, 1998
    Date of Patent: July 16, 2002
    Assignee: FermaLogic Inc.
    Inventors: J. Mark Weber, Minh B. Luu
  • Patent number: 6350591
    Abstract: We have developed a new gene transfer system for extreme thermophiles of the genus Thermus, including Thermus flavus., using a chromosomal gene, and a thermostable derivative of the kanamycin-resistance gene (kantr2). A plasmid mediated gene-replacement process is used to insert it into the chromosome resulting in the production of Leu−Kmr transformants. This system not only allows stable, single-copy gene insertion into the chromosome of an extreme thermophile, but can be used in the thermo-genetic process described here to generate thermo-stabilized enzymes and proteins for industrial processes. This host-vector environment makes it possible to generate further thermo-stabilizing mutations in the kan gene beyond those levels previously reported.
    Type: Grant
    Filed: February 16, 1999
    Date of Patent: February 26, 2002
    Assignee: Thermogen, Inc.
    Inventors: J. Mark Weber, David C. Demirjian, Malcolm J. Casadaban, Veronika Vonstein, Nikos C. Pagratis
  • Patent number: 5981177
    Abstract: The instant disclosure teaches transposons and methods of the instant invention for making Protein Fusions by rapid, random shuffling of protein domains to produce novel protein fusions. This system is generally applicable to production of multifunctional chimeric proteins in vivo and in vitro. The methods and constructs of the instant invention can be used to randomly create both carboxy- and amino-terminal protein fusions in vivo. The methods and contructs of the instant invention are useful in the development of a protein domain library, in the construction of multifunctional enzymes, and in the accelerated evolution of new enzymatic activities.
    Type: Grant
    Filed: January 25, 1995
    Date of Patent: November 9, 1999
    Inventors: David C. Demirjian, Malcolm J. Casadaban, J. Mark Weber, George L. Gaines, III
  • Patent number: 5976836
    Abstract: The present invention provides isolated and purified polypeptides that increase antibiotic production, polynucleotides that encode those polypeptides, expression vectors containing those polynucleotides, host cells transformed with those expression vectors, a process of making the polypeptides using those polynucleotides and vectors, and processes using those polypeptides and polynucleotides.
    Type: Grant
    Filed: May 7, 1997
    Date of Patent: November 2, 1999
    Assignee: FermaLogic, Inc.
    Inventors: J. Mark Weber, Paul E. Hessler, Peter E. Larsen, Minh B. Luu
  • Patent number: 5872238
    Abstract: We have developed a new gene transfer system for extreme thermophiles of the genus Thermus, including Thermus flavus., using a chromosomal gene, and a thermostable derivative of the kanamycin-resistance gene (kan.sup.tr2). A plasmid mediated gene-replacement process is used to insert it into the chromosome resulting in the production of Leu.sup.- Km.sup.r transformants. This system not only allows stable, single-copy gene insertion into the chromosome of an extreme thermophile, but can be used in the thermo-genetic process described here to generate thermo-stabilized enzymes and proteins for industrial processes. This host-vector environment makes it possible to generate further thermo-stabilizing mutations in the kan gene beyond those levels previously reported.
    Type: Grant
    Filed: August 18, 1997
    Date of Patent: February 16, 1999
    Assignee: Thermogen, Inc.
    Inventors: J. Mark Weber, David C. Demirjian, Malcolm J. Casadaban, Veronika Vonstein, Nikos C. Pagratis
  • Patent number: 5786174
    Abstract: We have developed a new gene transfer system for extreme thermophiles of the genus Thermus, including Thermus flavus., using a chromosomal gene, and a thermostable derivative of the kanamycin-resistance gene (kan.sup.tr2). A plasmid mediated gene-replacement process is used to insert it into the chromosome resulting in the production of Leu.sup.- Km.sup.r transformants. This system not only allows stable, single-copy gene insertion into the chromosome of an extreme thermophile, but can be used in the thermo-genetic process described here to generate thermo-stabilized enzymes and proteins for industrial processes. This host-vector environment makes it possible to generate further thermo-stabilizing mutations in the kan gene beyond those levels previously reported.
    Type: Grant
    Filed: January 28, 1997
    Date of Patent: July 28, 1998
    Assignee: Thermogen, Inc.
    Inventors: J. Mark Weber, David C. Demirjian, Malcolm J. Casadaban, Nikos C. Pagratis, Veronika Vonstein
  • Patent number: 5554519
    Abstract: The present invention provides a process of preparing the isoflavone genistein. Genistein is prepared by fermenting the bacteria Saccharopolyspora erythraea in the presence of a soy-based substrate. A process of recovering genistein from a bacterial fermentation medium using alkaline, organic solvent extraction is also provided.
    Type: Grant
    Filed: August 7, 1995
    Date of Patent: September 10, 1996
    Assignee: FermaLogic, Inc.
    Inventors: J. Mark Weber, Andreas Constantinou, Paul E. Hessler
  • Patent number: 5141926
    Abstract: Novel 6-deoxyerythromycin derivatives are disclosed, as are methods for their preparation and use as antiinfective agents. The compounds of the invention include 6-deoxyerythromycins and 6-deoxy-15-norerythromycins which are represented by the structural formula ##STR1## in which R.sub.1 is selected from OH and H, and R.sub.2 and R.sub.3 are independently selected from H and CH.sub.3, as well as the pharmaceutically acceptable salts and esters of the above compounds. Additionally disclosed are genetically modified microorganisms which produce the compounds of the invention and means for the preparation of those microorganisms.
    Type: Grant
    Filed: April 18, 1990
    Date of Patent: August 25, 1992
    Assignee: Abbott Laboratories
    Inventors: J. Mark Weber, James B. McAlpine