Patents by Inventor Jacek Lubelski

Jacek Lubelski has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240093231
    Abstract: The present invention relates to the production of adeno-associated viral vectors in insect cells. The insect cells therefore comprise a first nucleotide sequence encoding the adeno-associated virus (AAV) capsid proteins, whereby the initiation codon for translation of the AAV VP1 capsid protein is an AUG. Upstream of the VP1 open reading frame an alternative out of frame start codon is placed such that translation initiation of the VP1 protein is modified, i.e. reduced, to allow production of VP1:VP2:VP3 in a good stoichiometry resulting in AAV with high potency.
    Type: Application
    Filed: May 3, 2023
    Publication date: March 21, 2024
    Applicant: uniQure IP B.V.
    Inventors: David Johannes Francois Du Plessis, Olivier Ter Brake, Sebastiaan Menno Bosma, Harald Peter Albert Petry, Jacek Lubelski
  • Patent number: 11667931
    Abstract: The present invention relates to the production of adeno-associated viral vectors in insect cells. The insect cells therefore comprise a first nucleotide sequence encoding the adeno-associated virus (AAV) capsid proteins, whereby the initiation codon for translation of the AAV VP1 capsid protein is an AUG. Upstream of the VP1 open reading frame an alternative out of frame start codon is placed such that translation initiation of the VP1 protein is modified, i.e. reduced, to allow production of VP1:VP2:VP3 in a good stoichiometry resulting in AAV with high potency.
    Type: Grant
    Filed: January 15, 2020
    Date of Patent: June 6, 2023
    Assignee: uniQure IP B.V.
    Inventors: David Johannes Francois Du Plessis, Olivier Ter Brake, Sebastiaan Menno Bosma, Harald Peter Albert Petry, Jacek Lubelski
  • Publication number: 20230159951
    Abstract: The present invention relates novel combinations of nucleic acid constructs for the production of recombinant parvoviral gene therapy vectors. In particular the invention relates a combination preferably no more than two construct, the first construct expressing both the parvoviral Cap and Rep proteins, and the second construct at least comprising the transgene flanked ITRs and optionally again comprising an expression cassette forthe Cap proteins. The nucleic acid constructs are preferably baculoviral vectors for the production of rAAV in insect cells.
    Type: Application
    Filed: September 20, 2022
    Publication date: May 25, 2023
    Inventors: David Johannes Francois DU PLESSIS, ANGGAKUSUMA, Sebastiaan Menno BOSMA, Jacek LUBELSKI
  • Publication number: 20220073943
    Abstract: The present invention relates to promoters that function specifically or preferentially in the liver. These promoters are capable of enhancing liver-specific expression of genes. The invention also relates to expression constructs, vectors and cells comprising such liver-specific promoters, and to methods of their use. The present invention future relates to adeno-associated virus (AAV) gene therapy vectors comprising the liver-specific promoters, therapeutic agents comprising the liver-specific promoters, and methods using the same.
    Type: Application
    Filed: May 14, 2021
    Publication date: March 10, 2022
    Inventors: Jacek LUBELSKI, David Johannes Francois DU PLESSIS, Ying Poi LIU, Olivier TER BRAKE, Juan Manuel IGLESIAS GONZALEZ, Ross FRASER, Michael ROBERTS
  • Publication number: 20210332447
    Abstract: The current invention relates to nucleic acid impurities in a composition comprising a parvoviral vector. In particular, the current invention shows that DNA impurities are not randomly encapsulated within a parvoviral virion. The invention therefore relates to a method for identifying and quantifying a nucleic acid impurity in a composition comprising a parvoviral vector. Finally, the current invention relates to method of determining whether a composition comprising a parvoviral vector is regarded as clinically pure.
    Type: Application
    Filed: May 6, 2021
    Publication date: October 28, 2021
    Applicant: uniQure IP B.V.
    Inventors: Jacek LUBELSKI, Wilhelmus Theodorus Johannes Maria Christiaan HERMENS
  • Publication number: 20210222198
    Abstract: The present invention relates to the production of adeno-associated viral vectors in insect cells. The insect cells therefore comprise a first nucleotide sequence encoding the adeno-associated virus (AAV) capsid proteins, whereby the initiation codon for translation of the AAV VP1 capsid protein is a non-ATG, suboptimal initiation codon and wherein the coding sequence for one or more amino acid residues have been inserted between the suboptimal translation initiation codon and the codon encoding the amino acid residue that corresponds to the amino acid residue at position 2 of the wild type capsid amino acid sequence of which the first amino acid residue is alanine, glycine, valine, aspartic acid or glutamic acid.
    Type: Application
    Filed: November 5, 2020
    Publication date: July 22, 2021
    Applicant: Uniqure IP B.V.
    Inventors: Jacek LUBELSKI, Sebastiaan Bosma, Harald Peter Albert Petry, Wilhelmus Theodorus Johannes Maria Christ Hermens
  • Patent number: 11060070
    Abstract: Nucleic acids encoding Parvoviral Rep proteins with a mutated nuclear localization signal (NLS) are provided. Also provided is a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein with a mutated zinc finger domain and a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein comprising an amino acid mutation at position 43, 57, 79, 97, 120, 179, 305, 484, 493 or 571 with reference to SEQ ID NO: 2. Nucleic acid constructs and cells, such as insect cells, comprising the nucleic acids are provided as well as a method for producing a recombinant Parvoviral virion using the nucleic acids.
    Type: Grant
    Filed: July 17, 2019
    Date of Patent: July 13, 2021
    Assignee: UNIQURE IP B.V.
    Inventors: Yvet Noordman, Jacek Lubelski, Andrew Christian Bakker
  • Patent number: 11021762
    Abstract: The current invention relates to nucleic acid impurities in a composition comprising a parvoviral vector. In particular, the current invention shows that DNA impurities are not randomly encapsulated within a parvoviral virion. The invention therefore relates to a method for identifying and quantifying a nucleic acid impurity in a composition comprising a parvoviral vector. Finally, the current invention relates to method of determining whether a composition comprising a parvoviral vector is regarded as clinically pure.
    Type: Grant
    Filed: November 27, 2015
    Date of Patent: June 1, 2021
    Assignee: UNIQURE IP B.V.
    Inventors: Jacek Lubelski, Wilhelmus Theodorus Johannes Maria Christiaan Hermens
  • Patent number: 10837027
    Abstract: The present invention relates to the production of adeno-associated viral vectors in insect cells. The insect cells therefore comprise a first nucleotide sequence encoding the adeno-associated virus (AAV) capsid proteins, whereby the initiation codon for translation of the AAV VP1 capsid protein is a non-ATG, suboptimal initiation codon and wherein the coding sequence for one or more amino acid residues have been inserted between the suboptimal translation initiation codon and the codon encoding the amino acid residue that corresponds to the amino acid residue at position 2 of the wild type capsid amino acid sequence of which the first amino acid residue is alanine, glycine valine, aspartic acid or glutamic acid.
    Type: Grant
    Filed: March 10, 2015
    Date of Patent: November 17, 2020
    Assignee: UNIQURE IP B.V.
    Inventors: Jacek Lubelski, Sebastiaan Menno Bosma, Harald Peter Albert Petry, Wilhelmus Theodorus Johannes Maria Christiaan Hermens
  • Publication number: 20200248206
    Abstract: The present invention relates to the production of adeno-associated viral vectors in insect cells. The insect cells therefore comprise a first nucleotide sequence encoding the adeno-associated virus (AAV) capsid proteins, whereby the initiation codon for translation of the AAV VP1 capsid protein is an AUG. Upstream of the VP1 open reading frame an alternative out of frame start codon is placed such that translation initiation of the VP1 protein is modified, i.e. reduced, to allow production of VP1:VP2:VP3 in a good stoichiometry resulting in AAV with high potency.
    Type: Application
    Filed: January 15, 2020
    Publication date: August 6, 2020
    Inventors: David Johannes Francois Du Plessis, Olivier Ter Brake, Sebastiaan Menno Bosma, Harald Peter Albert Petry, Jacek Lubelski
  • Publication number: 20190338254
    Abstract: Nucleic acids encoding Parvoviral Rep proteins with a mutated nuclear localization signal (NLS) are provided. Also provided is a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein with a mutated zinc finger domain and a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein comprising an amino acid mutation at position 43, 57, 79, 97, 120, 179, 305, 484, 493 or 571 with reference to SEQ ID NO: 2. Nucleic acid constructs and cells, such as insect cells, comprising the nucleic acids are provided as well as a method for producing a recombinant Parvoviral virion using the nucleic acids.
    Type: Application
    Filed: July 17, 2019
    Publication date: November 7, 2019
    Applicant: uniQure IP B.V.
    Inventors: Yvet NOORDMAN, Jacek LUBELSKI, Andrew Christian BAKKER
  • Patent number: 10400221
    Abstract: Nucleic acids encoding Parvoviral Rep proteins with a mutated nuclear localization signal (NLS) are provided. Also provided is a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein with a mutated zinc finger domain and a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein comprising an amino acid mutation at position 43, 57, 79, 97, 120, 179, 305, 484, 493 or 571 with reference to SEQ ID NO: 2. Nucleic acid constructs and cells, such as insect cells, comprising the nucleic acids are provided as well as a method for producing a recombinant Parvoviral virion using the nucleic acids.
    Type: Grant
    Filed: January 5, 2018
    Date of Patent: September 3, 2019
    Assignee: Uniqure IP B.V.
    Inventors: Yvet Noordman, Jacek Lubelski, Andrew Christian Bakker
  • Publication number: 20180135027
    Abstract: Nucleic acids encoding Parvoviral Rep proteins with a mutated nuclear localization signal (NLS) are provided. Also provided is a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein with a mutated zinc finger domain and a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein comprising an amino acid mutation at position 43, 57, 79, 97, 120, 179, 305, 484, 493 or 571 with reference to SEQ ID NO: 2. Nucleic acid constructs and cells, such as insect cells, comprising the nucleic acids are provided as well as a method for producing a recombinant Parvoviral virion using the nucleic acids.
    Type: Application
    Filed: January 5, 2018
    Publication date: May 17, 2018
    Applicant: uniQure IP B.V.
    Inventors: Yvet NOORDMAN, Jacek LUBELSKI, Andrew Christian BAKKER
  • Patent number: 9885022
    Abstract: Nucleic acids encoding Parvoviral Rep proteins with a mutated nuclear localization signal (NLS) are provided. Also provided is a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein with a mutated zinc finger domain and a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein comprising an amino acid mutation at position 43, 57, 79, 97, 120, 179, 305, 484, 493 or 571 with reference to SEQ ID NO: 2. Nucleic acid constructs and cells, such as insect cells, comprising the nucleic acids are provided as well as a method for producing a recombinant Parvoviral virion using the nucleic acids.
    Type: Grant
    Filed: November 25, 2015
    Date of Patent: February 6, 2018
    Assignee: uniQure IP B.V.
    Inventors: Yvet Noordman, Jacek Lubelski, Andrew Christian Bakker
  • Publication number: 20170356008
    Abstract: The present invention relates to the production of adeno-associated viral vectors in insect cells. The insect cells therefore comprise a first nucleotide sequence encoding the adeno-associated virus (AAV) capsid proteins, whereby the initiation codon for translation of the AAV VP1 capsid protein is a non-ATG, suboptimal initiation codon and wherein the coding sequence for one or more amino acid residues have been inserted between the suboptimal translation initiation codon and the codon encoding the amino acid residue that corresponds to the amino acid residue at position 2 of the wild type capsid amino acid sequence of which the first amino acid residue is alanine, glycine valine, aspartic acid or glutamic acid.
    Type: Application
    Filed: March 10, 2015
    Publication date: December 14, 2017
    Applicant: UniQure IP B.V.
    Inventors: Jacek LUBELSKI, Sebastiaan Menno BOSMA, Harald Peter Albert PETRY, Wilhelmus Theodorus Johannes Maria Christiaan HERMENS
  • Publication number: 20170321290
    Abstract: The current invention relates to nucleic acid impurities in a composition comprising a parvoviral vector. In particular, the current invention shows that DNA impurities are not randomly encapsulated within a parvoviral virion. The invention therefore relates to a method for identifying and quantifying a nucleic acid impurity in a composition comprising a parvoviral vector. Finally, the current invention relates to method of determining whether a composition comprising a parvoviral vector is regarded as clinically pure.
    Type: Application
    Filed: November 27, 2015
    Publication date: November 9, 2017
    Applicant: uniQure IP B.V.
    Inventors: Jacek LUBELSKI, Wilhelmus Theodorus Johannes Maria Christiaan HERMENS
  • Publication number: 20160145584
    Abstract: Nucleic acids encoding Parvoviral Rep proteins with a mutated nuclear localization signal (NLS) are provided. Also provided is a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein with a mutated zinc finger domain and a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein comprising an amino acid mutation at position 43, 57, 79, 97, 120, 179, 305, 484, 493 or 571 with reference to SEQ ID NO: 2. Nucleic acid constructs and cells, such as insect cells, comprising the nucleic acids are provided as well as a method for producing a recombinant Parvoviral virion using the nucleic acids.
    Type: Application
    Filed: November 25, 2015
    Publication date: May 26, 2016
    Applicant: uniQure IP B.V.
    Inventors: Yvet NOORDMAN, Jacek LUBELSKI, Andrew Christian BAKKER
  • Patent number: 9228174
    Abstract: Nucleic acids encoding Parvoviral Rep proteins with a mutated nuclear localization signal (NLS) are provided. Also provided is a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein with a mutated zinc finger domain and a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein comprising an amino acid mutation at position 43, 57, 79, 97, 120, 179, 305, 484, 493 or 571 with reference to SEQ ID NO: 2. Nucleic acid constructs and cells, such as insect cells, comprising the nucleic acids are provided as well as a method for producing a recombinant Parvoviral virion using the nucleic acids.
    Type: Grant
    Filed: March 11, 2011
    Date of Patent: January 5, 2016
    Assignee: UNIQURE IP B.V.
    Inventors: Yvet Noordman, Jacek Lubelski, Andrew Christian Bakker
  • Publication number: 20130023034
    Abstract: The invention relates to a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein, wherein a nuclear localization signal (NLS) in said Parvoviral Rep protein is mutated as compared with a corresponding wild type sequence. The invention also relates to a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein, wherein the zinc finger domain in said Parvoviral Rep protein is mutated as compared with a corresponding wild type sequence. Further, the invention relates to a nucleic acid comprising a nucleotide sequence encoding a Parvoviral Rep protein, wherein an amino acid at position 43, 57, 79, 97, 120, 179, 305, 484, 493 or 571 of the said Parvoviral Rep protein is mutated in comparison to a corresponding wild type sequence, said amino acid position being defined with reference to SEQ ID NO: 2.
    Type: Application
    Filed: March 11, 2011
    Publication date: January 24, 2013
    Inventors: Yvet Noordman, Jacek Lubelski, Andrew Christian Bakker