Patents by Inventor Jeremy Davis-Turak

Jeremy Davis-Turak has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20250124037
    Abstract: A knowledge graph that relates experiments, factors, results, and scientists to provide users with new insights and new opportunities for collaboration. This system includes a plurality of representative experiment groups that each include their own context data and result data. The system may accept a new experiment data set comprising new context data and new result data. This new experiment data set may then be compared with the data from the plurality of representative experiment groups to generate similarity scores. These similarity scores may be used to determine what relationships to create between the current data and other pre-existing data. Grouping the new experiment data set may generate connections between related experiments and data, as well as spark collaboration between scientists doing similar experiments.
    Type: Application
    Filed: October 17, 2024
    Publication date: April 17, 2025
    Inventors: Benjamin Good, Jean Lozach, Timothy Wesselman, Jeremy Davis-Turak, Aaron Stanz
  • Patent number: 11387003
    Abstract: The present invention is directed to systems and methods for displaying and contributing to a database of genomic information in a notebook-like format, with emphasis on establishing and viewing relationships between data points in the database. The present invention features a server containing the database of genomic information and a computing device communicatively coupled to the database. The computing device may comprise a Note Input Module for allowing the user to input a note into the database of genomic information. The note may be associated with a first data point and connect it to one or more second data points. The computing device may further comprise a Note Association Module for adding to the list of associated data points of a pre-existing note. The computing device may further comprise a Browsing Module for allowing a user to search the database of genomic information for data points and notes.
    Type: Grant
    Filed: March 19, 2021
    Date of Patent: July 12, 2022
    Assignee: ROSALIND, INC.
    Inventors: Jeremy Davis-Turak, Roshni Patel, Aaron Stanz, Jean Lozach, James Belemonti, Gabriel Giestas, Cassandra Wesselman, Timothy Wesselman
  • Publication number: 20210210215
    Abstract: The present invention is directed to systems and methods for displaying and contributing to a database of genomic information in a notebook-like format, with emphasis on establishing and viewing relationships between data points in the database. The present invention features a server containing the database of genomic information and a computing device communicatively coupled to the database. The computing device may comprise a Note Input Module for allowing the user to input a note into the database of genomic information. The note may be associated with a first data point and connect it to one or more second data points. The computing device may further comprise a Note Association Module for adding to the list of associated data points of a pre-existing note. The computing device may further comprise a Browsing Module for allowing a user to search the database of genomic information for data points and notes.
    Type: Application
    Filed: March 19, 2021
    Publication date: July 8, 2021
    Inventors: Jeremy Davis-Turak, Roshni Patel, Aaron Stanz, Jean Lozach, James Belemonti, Gabriel Giestas, Cassandra Wesselman, Timothy Wesselman
  • Publication number: 20190287655
    Abstract: A method for efficiently processing and storing large data sets associated with a multi-stage bioinformatics analysis of genomic data is disclosed. The present method increases the efficiency of the electronic storage of these large data sets by automatically deleting or compressing intermediate data or a portion of output data and compressing input data, where both deletion and compression are based on predetermined characteristics of said data. When necessary, such data can be recovered using generated metadata associated with the data. Doing so, not only improves the storage efficiency of massively large genomic datasets, but also allows for the consistent reproduction of output data with the re-processing of intermediate data based on information stored in metadata.
    Type: Application
    Filed: June 5, 2019
    Publication date: September 19, 2019
    Inventors: Timothy Wesselman, Jeremy Davis-Turak, Roshni Patel, Bryan Chin, Ali Tajeldin, Jean Lozach
  • Patent number: 10331848
    Abstract: A method for efficiently processing and storing large data sets associated with a multi-stage bioinformatics analysis of genomic data is disclosed. The present method increases the efficiency of the electronic storage of these large data sets by automatically deleting or compressing intermediate data or a portion of output data and compressing input data, where both deletion and compression are based on predetermined characteristics of said data. When necessary, such data can be recovered using generated metadata associated with the data. Doing so, not only improves the storage efficiency of massively large genomic datasets, but also allows for the consistent reproduction of output data with the re-processing of intermediate data based on information stored in metadata.
    Type: Grant
    Filed: September 26, 2017
    Date of Patent: June 25, 2019
    Assignee: ONRAMP BIOINFORMATICS, INC.
    Inventors: Timothy Wesselman, Jeremy Davis-Turak, Roshni Patel, Bryan Chin, Ali Tajeldin, Jean Lozach
  • Publication number: 20180218114
    Abstract: A method for efficiently processing and storing large data sets associated with a multi-stage bioinformatics analysis of genomic data is disclosed. The present method increases the efficiency of the electronic storage of these large data sets by automatically deleting or compressing intermediate data or a portion of output data and compressing input data, where both deletion and compression are based on predetermined characteristics of said data. When necessary, such data can be recovered using generated metadata associated with the data. Doing so, not only improves the storage efficiency of massively large genomic datasets, but also allows for the consistent reproduction of output data with the re-processing of intermediate data based on information stored in metadata.
    Type: Application
    Filed: September 26, 2017
    Publication date: August 2, 2018
    Inventors: Timothy Wesselman, Jeremy Davis-Turak, Roshni Patel, Bryan Chin, Ali Tajeldin, Jean Lozach