Patents by Inventor Jeremy S. Edwards

Jeremy S. Edwards has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11624090
    Abstract: Nucleic acid sequencing methods and systems, the systems including nanochannel chip including: a nanochannel formed in an upper surface of the nanochannel chip and; a roof covering the nanochannel and comprising nanopores and a field enhancement structure; and a barrier disposed in the nanochannel. The method including: introducing a buffer solution including long-chain nucleic acids to the nanochannel chip; applying a voltage potential across the nanochannel chip to drive the nucleic acids through the nanochannel, towards the barrier, and to translocate the nucleic acids through nanopores adjacent to the barrier, such that bases of each of the nucleic acids pass through the field enhancement structure one base at a time and emerge onto an upper surface of the roof; detecting the Raman spectra of the bases of the nucleic acids as each base passes through the electromagnetic-field enhancement structure; and sequencing the nucleic acids based on the detected Raman spectra.
    Type: Grant
    Filed: January 13, 2020
    Date of Patent: April 11, 2023
    Assignee: Armonica Technologies, Inc.
    Inventors: Anupama Suryanaraya, Olga Amosova, Yuliya Kuznetsova, Alexander Neumann, Xin Jin, Steven Roy Julien Brueck, Jeremy S. Edwards
  • Publication number: 20200224263
    Abstract: Nucleic acid sequencing methods and systems, the systems including nanochannel chip including: a nanochannel formed in an upper surface of the nanochannel chip and; a roof covering the nanochannel and comprising nanopores and a field enhancement structure; and a barrier disposed in the nanochannel. The method including: introducing a buffer solution including long-chain nucleic acids to the nanochannel chip; applying a voltage potential across the nanochannel chip to drive the nucleic acids through the nanochannel, towards the barrier, and to translocate the nucleic acids through nanopores adjacent to the barrier, such that bases of each of the nucleic acids pass through the field enhancement structure one base at a time and emerge onto an upper surface of the roof; detecting the Raman spectra of the bases of the nucleic acids as each base passes through the electromagnetic-field enhancement structure; and sequencing the nucleic acids based on the detected Raman spectra.
    Type: Application
    Filed: January 13, 2020
    Publication date: July 16, 2020
    Inventors: Anupama Suryanaraya, Olga Amosova, Yuliya Kuznetsova, Alexander Neumann, Xin Jin, Steven Roy Julien Bruek, Jeremy S. Edwards
  • Publication number: 20120021522
    Abstract: The present invention relates to methods for achieving an optimal function of a biochemical reaction network. The methods can be performed in silico using a reconstruction of a biochemical reaction network of a cell and iterative optimization procedures. The methods can further include laboratory culturing steps to confirm and possibly expand the determinations made using the in silico methods, and to produce a cultured cell, or population of cells, with optimal functions. The current invention includes computer systems and computer products including computer-readable program code for performing the in silico steps of the invention.
    Type: Application
    Filed: February 17, 2011
    Publication date: January 26, 2012
    Inventors: Bernhard O. Palsson, Jeremy S. Edwards
  • Patent number: 7920993
    Abstract: The present invention relates to methods for achieving an optimal function of a biochemical reaction network. The methods can be performed in silico using a reconstruction of a biochemical reaction network of a cell and iterative optimization procedures. The methods can further include laboratory culturing steps to confirm and possibly expand the determinations made using the in silico methods, and to produce a cultured cell, or population of cells, with optimal functions. The current invention includes computer systems and computer products including computer-readable program code for performing the in silico steps of the invention.
    Type: Grant
    Filed: September 22, 2006
    Date of Patent: April 5, 2011
    Assignee: The Regents of the University of California
    Inventors: Bernhard O. Palsson, Jeremy S. Edwards
  • Patent number: 7920994
    Abstract: The present invention relates to methods for achieving an optimal function of a biochemical reaction network. The methods can be performed in silico using a reconstruction of a biochemical reaction network of a cell and iterative optimization procedures. The methods can further include laboratory culturing steps to confirm and possibly expand the determinations made using the in silico methods, and to produce a cultured cell, or population of cells, with optimal functions. The current invention includes computer systems and computer products including computer-readable program code for performing the in silico steps of the invention.
    Type: Grant
    Filed: October 19, 2006
    Date of Patent: April 5, 2011
    Assignee: The Regents of the University of California
    Inventors: Bernhard O. Palsson, Jeremy S. Edwards
  • Publication number: 20080176327
    Abstract: The present invention relates to methods for achieving an optimal function of a biochemical reaction network. The methods can be performed in silico using a reconstruction of a biochemical reaction network of a cell and iterative optimization procedures. The methods can further include laboratory culturing steps to confirm and possibly expand the determinations made using the in silico methods, and to produce a cultured cell, or population of cells, with optimal functions. The current invention includes computer systems and computer products including computer-readable program code for performing the in silico steps of the invention.
    Type: Application
    Filed: October 29, 2007
    Publication date: July 24, 2008
    Inventors: Bernhard O. Palsson, Jeremy S. Edwards
  • Patent number: 7127379
    Abstract: The present invention relates to methods for achieving an optimal function of a biochemical reaction network. The methods can be performed in silico using a reconstruction of a biochemical reaction network of a cell and iterative optimization procedures. The methods can further include laboratory culturing steps to confirm and possibly expand the determinations made using the in silico methods, and to produce a cultured cell, or population of cells, with optimal functions. The current invention includes computer systems and computer products including computer-readable program code for performing the in silico steps of the invention.
    Type: Grant
    Filed: August 27, 2001
    Date of Patent: October 24, 2006
    Assignee: The Regents of the University of California
    Inventors: Bernhard O. Palsson, Jeremy S. Edwards
  • Publication number: 20020142321
    Abstract: The present invention relates to methods for achieving an optimal function of a biochemical reaction network. The methods can be performed in silico using a reconstruction of a biochemical reaction network of a cell and iterative optimization procedures. The methods can further include laboratory culturing steps to confirm and possibly expand the determinations made using the in silico methods, and to produce a cultured cell, or population of cells, with optimal functions. The current invention includes computer systems and computer products including computer-readable program code for performing the in silico steps of the invention.
    Type: Application
    Filed: August 27, 2001
    Publication date: October 3, 2002
    Inventors: Bernhard O. Palsson, Jeremy S. Edwards