Patents by Inventor Jingbo Tang

Jingbo Tang has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11836430
    Abstract: Proposed by the present disclosure are an FPGA-based resequencing analysis method and device, wherein the method comprises: receiving genomic resequencing data; using the resequencing data as an input of an FPGA, determining a comparison result in the resequencing process according to an output of the FPGA, and simultaneously performing sorting and deduplication processing on the comparison result; correcting a base quality value of the comparison result after sorting and deduplication processing; and detecting a mutation result according to the corrected comparison result. The described method may save program running time, save calculation costs, and improve resequencing efficiency.
    Type: Grant
    Filed: October 23, 2018
    Date of Patent: December 5, 2023
    Assignee: MGI TECH CO., LTD.
    Inventors: Yinlong Xie, Weihua Huang, Chen Chen, Jingbo Tang
  • Publication number: 20220058321
    Abstract: Proposed by the present disclosure are an FPGA-based resequencing analysis method and device, wherein the method comprises: receiving genomic resequencing data; using the resequencing data as an input of an FPGA, determining a comparison result in the resequencing process according to an output of the FPGA, and simultaneously performing sorting and deduplication processing on the comparison result: correcting a base quality value of the comparison result after sorting and deduplication processing; and detecting a mutation result according to the corrected comparison result. The described method may save program running time, save calculation costs, and improve resequencing efficiency.
    Type: Application
    Filed: October 23, 2018
    Publication date: February 24, 2022
    Inventors: Yinlong Xie, Weihua Huang, Chen Chen, Jingbo Tang
  • Publication number: 20150120204
    Abstract: Provided is a transcriptome assembly method, comprising the following steps of: constructing a sequencing sample transcriptome read into a de Brujin graph; performing filtering and linearization processing on the de Brujin graph, so as to form continuous contigs; obtaining association among the contigs, and filtering association data; performing linearization processing on a continuous sequence without bifurcation; outputting a contig sequence; comparing the read and an end pairing read with the output contig sequence, so as to obtain information between the read and the contig; establishing connections among the contigs, so as to construct a graph with the contigs as points and the connections as edges; pre-processing and dividing the obtained graph, so as to obtain independent sub-graphs; and outputting a transcript according to the sub-graphs. Further provided is a transcriptome assembly system based on the method.
    Type: Application
    Filed: April 13, 2012
    Publication date: April 30, 2015
    Applicant: BGI TECH SOLUTIONS CO., LTD.
    Inventors: Gengxiong Wu, Weihua Huang, Yinlong Xie, Jingbo Tang, Jun Wang, Jian Wang, Huanming Yang