Patents by Inventor John Clark Lagarias

John Clark Lagarias has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11021523
    Abstract: The present invention provides a protein fusion construct comprising a far-red cyanobacteriochrome (CBCR) domain linked to a heterologous domain, wherein the far-red CBCR domain comprises a CBCR polypeptide and a tetrapyrrole chromophore. The invention also provides nucleic acids, expression cassettes, vectors, and host cells for expression of the far-red CBCR protein fusion constructs. Methods for detecting cellular components, methods for imaging biological structures, and method for modulating cellular processes using the protein fusion constructs are also provided.
    Type: Grant
    Filed: August 22, 2018
    Date of Patent: June 1, 2021
    Assignee: The Regents of the University of California
    Inventors: John Clark Lagarias, Nathan Clarke Rockwell
  • Publication number: 20190133160
    Abstract: Compositions and methods are disclosed for the coloring of foodstuffs with recombinant, purified, and/or isolated cyanobacteriochromes (CBCRs). The CBCRs can affect the apparent color of a food by selective absorbing or fluorescing particular wavelengths of light. The CBCRs can have either colorfast properties, in which the CBCRs consistently appear as having a single color, or color changing properties, in which the CBCRs can switch between two states that each appear as a different color.
    Type: Application
    Filed: November 14, 2018
    Publication date: May 9, 2019
    Applicant: THE REGENTS OF THE UNIVERSITY OF CALIFORNIA
    Inventors: John Clark Lagarias, Nathan Clarke Rockwell, Shelley S. Martin
  • Publication number: 20180354998
    Abstract: The present invention provides a protein fusion construct comprising a far-red cyanobacteriochrome (CBCR) domain linked to a heterologous domain, wherein the far-red CBCR domain comprises a CBCR polypeptide and a tetrapyrrole chromophore. The invention also provides nucleic acids, expression cassettes, vectors, and host cells for expression of the far-red CBCR protein fusion constructs. Methods for detecting cellular components, methods for imaging biological structures, and method for modulating cellular processes using the protein fusion constructs are also provided.
    Type: Application
    Filed: August 22, 2018
    Publication date: December 13, 2018
    Applicant: The Regents of the University of California
    Inventors: John Clark Lagarias, Nathan Clarke Rockwell
  • Patent number: 9506080
    Abstract: This invention pertains to the discovery of mutant phytochromes that when introduced into a plant alter the photomorphogenic properties of that plant. In certain embodiments transfection of plants by nucleic acid constructs expressing the mutant phytochromes produced plants having a phenotype characterized by light-independent’ activation. Thus, in certain embodiments, this invention provides a transgenic plant or plant cell comprising a mutant phytochrome where the mutant phytochrome is a light-stable phytochrome; and the transgenic plant shows decreased shade avoidance as compared to the same species or strain of plant lacking the mutant phytochrome. In various embodiments the mutant phytochrome comprises a mutation at the position corresponding to tyrosine residue 276 in an Arabidopsis phytochrome where the mutation is to a residue other than tyrosine.
    Type: Grant
    Filed: April 9, 2014
    Date of Patent: November 29, 2016
    Assignee: The Regents of the University of California
    Inventors: John Clark Lagarias, Yi-Shin Su
  • Publication number: 20140331359
    Abstract: This invention pertains to the discovery of mutant phytochromes that when introduced into a plant alter the photomorphogenic properties of that plant. In certain embodiments transfection of plants by nucleic acid constructs expressing the mutant phytochromes produced plants having a phenotype characterized by light-independent’ activation. Thus, in certain embodiments, this invention provides a transgenic plant or plant cell comprising a mutant phytochrome where the mutant phytochrome is a light-stable phytochrome; and the transgenic plant shows decreased shade avoidance as compared to the same species or strain of plant lacking the mutant phytochrome. In various embodiments the mutant phytochrome comprises a mutation at the position corresponding to tyrosine residue 276 in an Arabidopsis phytochrome where the mutation is to a residue other than tyrosine.
    Type: Application
    Filed: April 9, 2014
    Publication date: November 6, 2014
    Applicant: The Regents of the University of California
    Inventors: John Clark LAGARIAS, Yi-Shin SU
  • Patent number: 8735555
    Abstract: This invention pertains to the discovery of mutant phytochromes that when introduced into a plant alter the photomorphogenic properties of that plant. In certain embodiments transfection of plants by nucleic acid constructs expressing the mutant phytochromes produced plants having a phenotype characterized by light-independent activation. Thus, in certain embodiments, this invention provides a transgenic plant or plant cell comprising a mutant phytochrome where the mutant phytochrome is a light-stable phytochrome; and the transgenic plant shows decreased shade avoidance as compared to the same species or strain of plant lacking the mutant phytochrome. In various embodiments the mutant phytochrome comprises a mutation at the position corresponding to tyrosine residue 276 in an Arabidopsis phytochrome where the mutation is to a residue other than tyrosine.
    Type: Grant
    Filed: April 16, 2007
    Date of Patent: May 27, 2014
    Assignee: The Regents of the University of California
    Inventors: John Clark Lagarias, Yi-Shin Su
  • Patent number: 7795397
    Abstract: This invention provides fluorescent adducts that emit in the far red and/or near infrared. In certain embodiments, the adducts comprise a mutant apoprotein and a bilin.
    Type: Grant
    Filed: May 5, 2005
    Date of Patent: September 14, 2010
    Assignee: The Regents of the University of California
    Inventors: John Clark Lagarias, Amanda J. Fischer
  • Publication number: 20090300793
    Abstract: This invention pertains to the discovery of mutant phytochromes that when introduced into a plant alter the photomorphogenic properties of that plant. In certain embodiments transfection of plants by nucleic acid constructs expressing the mutant phytochromes produced plants having a phenotype characterized by light-independent activation. Thus, in certain embodiments, this invention provides a transgenic plant or plant cell comprising a mutant phytochrome where the mutant phytochrome is a light-stable phytochrome; and the transgenic plant shows decreased shade avoidance as compared to the same species or strain of plant lacking the mutant phytochrome. In various embodiments the mutant phytochrome comprises a mutation at the position corresponding to tyrosine residue 276 in an Arabidopsis phytochrome where the mutation is to a residue other than tyrosine.
    Type: Application
    Filed: April 16, 2007
    Publication date: December 3, 2009
    Inventors: John Clark Lagarias, Yi-Shin Su
  • Patent number: 7033806
    Abstract: This invention identifies a novel family of bilin reductases. Designated herein HY bilin reductases, the enzymes of this invention are useful in a wide variety of contexts including but not limited to the conversion of biliverdins to phytobilins and the assembly of holophytochromes or phytofluors.
    Type: Grant
    Filed: May 29, 2001
    Date of Patent: April 25, 2006
    Assignee: The Regents of the University of California
    Inventors: John Clark Lagarias, Takayuki Kochi, Nicole Frankenberg, Gregory A. Gambetta, Beronda L. Montgomery
  • Patent number: 6887688
    Abstract: This invention relates to the field of gene expression. In particular this invention relates to the use of heterologous phytochromes to translocate polypeptides into the nucleus of a cell. Where the polypeptides comprise transactivators or repressors this invention provides a system for light-directed gene expression.
    Type: Grant
    Filed: May 29, 2002
    Date of Patent: May 3, 2005
    Assignee: The Regents of the University of California
    Inventors: John Clark Lagarias, Takayuki Kochi, Nicole Frankenberg, Gregory A. Gambetta, Beronda L. Montgomery
  • Publication number: 20030104379
    Abstract: This invention identifies a novel family of bilin reductases. Designated herein HY bilin reductases, the enzymes of this invention are useful in a wide variety of contexts including but not limited to the conversion of biliverdins to phytobilins and the assembly of holophytochromes or phytofluors.
    Type: Application
    Filed: May 29, 2001
    Publication date: June 5, 2003
    Applicant: The Regents of the University of California
    Inventors: John Clark Lagarias, Takayuki Kochi, Nicole Frankenberg, Gregory A. Gambetta, Beronda L. Montgomery
  • Publication number: 20030073235
    Abstract: This invention relates to the field of gene expression. In particular this invention relates to the use of heterologous phytochromes to translocate polypeptides into the nucleus of a cell. Where the polypeptides comprise transactivators or repressors this invention provides a system for light-directed gene expression.
    Type: Application
    Filed: May 29, 2002
    Publication date: April 17, 2003
    Applicant: The Regents of the University of California
    Inventors: John Clark Lagarias, Takayuki Kochi, Nicole Frankenberg, Gregory A. Gambetta, Beronda L. Montgomery
  • Publication number: 20020022239
    Abstract: This invention provides new fluorescent molecules useful for detection of target entities. In particular, it relates to fluorescent adducts comprising an apoprotein and a bilin.
    Type: Application
    Filed: March 19, 1999
    Publication date: February 21, 2002
    Inventor: JOHN CLARK LAGARIAS
  • Patent number: 6046014
    Abstract: This invention provides new fluorescent molecules useful for detection of target entities. In particular, it relates to fluorescent adducts comprising an apoprotein and a bilin.
    Type: Grant
    Filed: August 1, 1997
    Date of Patent: April 4, 2000
    Assignee: The Regents of the University of California
    Inventors: John Clark Lagarias, John Thomas Murphy