Patents by Inventor John D. Brennan

John D. Brennan has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11940444
    Abstract: The present application is directed to methods of performing chemical reactions, including multi-step chemical reactions in which two or more of the reagents in the chemical reaction are incorporated or entrapped in a solid polymeric structure comprising pullulan. In certain embodiments, the chemical reaction or multi-step reaction serves as a sensor. Accordingly the present application is also directed to sensors for performing the methods of the application. In certain embodiments, at least one of the reagents is a biomolecule and the sensor is a biosensor. In certain other embodiments, the solid polymeric structure comprising pullulan and the reagents for performing a chemical reaction form a convenient device for performing a chemical reaction.
    Type: Grant
    Filed: June 28, 2021
    Date of Patent: March 26, 2024
    Assignee: McMaster University
    Inventors: Carlos Filipe, John D. Brennan, Robert Pelton, Sana Jahanshahi-Anbuhi, Yingfu Li
  • Publication number: 20230295635
    Abstract: This disclosure relates to DNA aptamers that bind eosinophil peroxidase, including uses thereof, such as in eosinophil peroxidase detection assays. Also provided is a method for detecting the presence of eosinophil peroxidase in a sample, using the DNA aptamers that bind eosinophil peroxidase. Further provided is a kit for detecting the presence of eosinophil peroxidase in a sample, using the DNA aptamers that bind eosinophil peroxidase.
    Type: Application
    Filed: October 14, 2022
    Publication date: September 21, 2023
    Inventors: John D. Brennan, Monsur Ali, Michael Wolfe, Dawn White, Manali Mukherjee, Parameswaran Nair, Alfredo Capretta
  • Publication number: 20230257802
    Abstract: This disclosure relates to catalytic nucleic acid probes, biosensors and lateral flow biosensor systems and methods and kits of using the probes, biosensors and lateral flow biosensor systems for detecting microorganisms such as Staphylococcus aureus.
    Type: Application
    Filed: November 18, 2022
    Publication date: August 17, 2023
    Inventors: Monsur Ali, Dawn White, Saeed Mohammadi, John D. Brennan, Yingfu Li, Alfredo Capretta
  • Patent number: 11549945
    Abstract: Provided herein are nucleic acid-cleaving catalytic nucleic acid probes, biosensors and lateral flow biosensor devices and methods and kits of using the probes, biosensors and lateral flow biosensor devices for detecting an analyte present on or generated from a microorganism in a test sample, including Helicobacter pylori and methods for determining whether a subject has a Helicobacter pylori infection.
    Type: Grant
    Filed: May 15, 2020
    Date of Patent: January 10, 2023
    Assignee: McMaster University
    Inventors: John D. Brennan, Yingfu Li, Monsur Ali, Carlos Filipe, Michael Gregory Wolfe
  • Publication number: 20220065851
    Abstract: The present application is directed to methods of performing chemical reactions, including multi-step chemical reactions in which two or more of the reagents in the chemical reaction are incorporated or entrapped in a solid polymeric structure comprising pullulan. In certain embodiments, the chemical reaction or multi-step reaction serves as a sensor. Accordingly the present application is also directed to sensors for performing the methods of the application. In certain embodiments, at least one of the reagents is a biomolecule and the sensor is a biosensor. In certain other embodiments, the solid polymeric structure comprising pullulan and the reagents for performing a chemical reaction form a convenient device for performing a chemical reaction.
    Type: Application
    Filed: June 28, 2021
    Publication date: March 3, 2022
    Applicant: McMaster University
    Inventors: Carlos Filipe, John D. Brennan, Robert Pelton, Sana Jahanshahi-Anbuhi, Yingfu Li
  • Patent number: 11067569
    Abstract: The present application is directed to methods of performing chemical reactions, including multi-step chemical reactions in which two or more of the reagents in the chemical reaction are incorporated or entrapped in a solid polymeric structure comprising pullulan. In certain embodiments, the chemical reaction or multi-step reaction serves as a sensor. Accordingly the present application is also directed to sensors for performing the methods of the application. In certain embodiments, at least one of the reagents is a biomolecule and the sensor is a biosensor. In certain other embodiments, the solid polymeric structure comprising pullulan and the reagents for performing a chemical reaction form a convenient device for performing a chemical reaction.
    Type: Grant
    Filed: February 13, 2019
    Date of Patent: July 20, 2021
    Assignee: MCMASTER UNIVERSITY
    Inventors: Carlos Filipe, John D. Brennan, Robert Pelton, Sana Jahanshahi-Anbuhi, Yingfu Li
  • Publication number: 20200363413
    Abstract: Provided herein are nucleic acid-cleaving catalytic nucleic acid probes, biosensors and lateral flow biosensor devices and methods and kits of using the probes, biosensors and lateral flow biosensor devices for detecting an analyte present on or generated from a microorganism in a test sample, including Helicobacter pylori and methods for determining whether a subject has a Helicobacter pylori infection.
    Type: Application
    Filed: May 15, 2020
    Publication date: November 19, 2020
    Inventors: John D. Brennan, Yingfu Li, Monsur Ali, Carlos Filipe, Michael Gregory Wolfe
  • Patent number: 10577665
    Abstract: Provided herein are aptamers, aptamer probes and biosensor systems that detect C. difficile glutamate dehydrogenase (GDH). Also provided are methods of detecting C. difficile GDH using the aptamers, probes and biosensors and methods of determining whether a subject has a C. difficile infection.
    Type: Grant
    Filed: September 4, 2018
    Date of Patent: March 3, 2020
    Assignee: McMaster University
    Inventors: Yingfu Li, John D. Brennan, Meng Liu
  • Publication number: 20190178880
    Abstract: The present application is directed to methods of performing chemical reactions, including multi-step chemical reactions in which two or more of the reagents in the chemical reaction are incorporated or entrapped in a solid polymeric structure comprising pullulan. In certain embodiments, the chemical reaction or multi-step reaction serves as a sensor. Accordingly the present application is also directed to sensors for performing the methods of the application. In certain embodiments, at least one of the reagents is a biomolecule and the sensor is a biosensor. In certain other embodiments, the solid polymeric structure comprising pullulan and the reagents for performing a chemical reaction form a convenient device for performing a chemical reaction.
    Type: Application
    Filed: February 13, 2019
    Publication date: June 13, 2019
    Applicant: McMaster University
    Inventors: Carlos Filipe, John D. Brennan, Robert Pelton, Sana Jahanshahi-Anbuhi, Yingfu Li
  • Patent number: 10241109
    Abstract: The present application is directed to methods of performing chemical reactions, including multi-step chemical reactions in which two or more of the reagents in the chemical reaction are incorporated or entrapped in a solid polymeric structure comprising pullulan. In certain embodiments, the chemical reaction or multi-step reaction serves as a sensor. Accordingly the present application is also directed to sensors for performing the methods of the application. In certain embodiments, at least one of the reagents is a biomolecule and the sensor is a biosensor. In certain other embodiments, the solid polymeric structure comprising pullulan and the reagents for performing a chemical reaction form a convenient device for performing a chemical reaction.
    Type: Grant
    Filed: November 10, 2014
    Date of Patent: March 26, 2019
    Assignee: McMaster University
    Inventors: Carlos Filipe, John D. Brennan, Robert Pelton, Sana Jahanshahi-Anbuhi, Yingfu Li
  • Publication number: 20190071714
    Abstract: Provided herein are aptamers, aptamer probes and biosensor systems that detect C. difficile glutamate dehydrogenase (GDH). Also provided are methods of detecting C. difficile GDH using the aptamers, probes and biosensors and methods of determining whether a subject has a C. difficile infection.
    Type: Application
    Filed: September 4, 2018
    Publication date: March 7, 2019
    Inventors: Yingfu Li, John D. Brennan, Meng Liu
  • Patent number: 10190154
    Abstract: The present application discloses a biosensor that comprises a nucleic acid probe absorbed on reduced graphene oxide, the nucleic acid probe comprising an RCA primer sequence linked to a recognition moiety for an analyte to be detected by the biosensor.
    Type: Grant
    Filed: April 6, 2016
    Date of Patent: January 29, 2019
    Assignee: McMaster University
    Inventors: Yingfu Li, John D. Brennan, Meng Liu
  • Patent number: 10150986
    Abstract: The present application relates to biosensors, for example comprising an high-molecular weight, tandem repeating, structure-switching nucleic acid aptamers (concatemeric aptamers) to rapidly create patterned sensors via, for example, inkjet printing. These concatemeric aptamer reporters remain immobilized at the point of printing through strong adsorption but retain sufficient segmental mobility to undergo structure switching and reporter signalling to provide both qualitative and quantitative detection of one or more analytes. In certain embodiments, inkjet printing allows for the patterning of internally referenced sensors with multiplexed detection, and provides a generic platform for on-demand printing of sensors even in remote locations.
    Type: Grant
    Filed: March 24, 2016
    Date of Patent: December 11, 2018
    Assignee: MCMASTER UNIVERSITY
    Inventors: John D. Brennan, Yingfu Li, Carmen Carrasquilla
  • Publication number: 20180340222
    Abstract: The present application relates to a new class of macroporous bio/inorganic hybrids, engineered through a high-throughput materials screening approach that entrap micron-sized concatemeric DNA aptamers. The entrapment of these long-chain DNA aptamers allows their retention within the macropores of the silica material, so that aptamers can interact with high molecular weight targets such as proteins.
    Type: Application
    Filed: May 25, 2018
    Publication date: November 29, 2018
    Applicant: McMaster University
    Inventors: Carmen Carrasquilla, Yingfu Li, John D. Brennan
  • Publication number: 20160291000
    Abstract: The present application is directed to methods of performing chemical reactions, including multi-step chemical reactions in which two or more of the reagents in the chemical reaction are incorporated or entrapped in a solid polymeric structure comprising pullulan. In certain embodiments, the chemical reaction or multi-step reaction serves as a sensor. Accordingly the present application is also directed to sensors for performing the methods of the application. In certain embodiments, at least one of the reagents is a biomolecule and the sensor is a biosensor. In certain other embodiments, the solid polymeric structure comprising pullulan and the reagents for performing a chemical reaction form a convenient device for performing a chemical reaction.
    Type: Application
    Filed: November 10, 2014
    Publication date: October 6, 2016
    Applicant: McMaster University
    Inventors: Carlos Filipe, John D. Brennan, Robert Pelton, Sana Jahanshahi-Anbuhi, Yingfu Li
  • Publication number: 20160289733
    Abstract: The present application discloses a biosensor that comprises a nucleic acid probe absorbed on reduced graphene oxide, the nucleic acid probe comprising an RCA primer sequence linked to a recognition moiety for an analyte to be detected by the biosensor.
    Type: Application
    Filed: April 6, 2016
    Publication date: October 6, 2016
    Applicant: McMaster University
    Inventors: Yingfu Li, John D. Brennan, Meng Liu
  • Publication number: 20160281145
    Abstract: The present application relates to biosensors, for example comprising an high-molecular weight, tandem repeating, structure-switching nucleic acid aptamers (concatemeric aptamers) to rapidly create patterned sensors via, for example, inkjet printing. These concatemeric aptamer reporters remain immobilized at the point of printing through strong adsorption but retain sufficient segmental mobility to undergo structure switching and reporter signalling to provide both qualitative and quantitative detection of one or more analytes. In certain embodiments, inkjet printing allows for the patterning of internally referenced sensors with multiplexed detection, and provides a generic platform for on-demand printing of sensors even in remote locations.
    Type: Application
    Filed: March 24, 2016
    Publication date: September 29, 2016
    Applicant: McMaster University
    Inventors: John D. Brennan, Yingfu Li, Carmen Carrasquilla
  • Publication number: 20160054310
    Abstract: Novel solid-phase biosensors that utilize ink jet printing of biocompatible sol-gel based inks to create sensor strips are reported herein. Biomolecules and other reagents useful in bioassays to detect, for example, pathogenic microorganisms or toxic substances, are immobilized on a substrate, which can be paper based, by layering these substances between two layers of biomolecule compatible sol gel. The sol gel precursor solutions and solutions of the assay reagents are printed from separate nozzles in a layered approach which avoids clogging of the nozzles by the pre-mature gelling of the sol gel precursor solution. In certain embodiments of the application, a capture agent is used to concentrate a compound to be detected in specific areas on the substrate to facilitate detection.
    Type: Application
    Filed: September 30, 2015
    Publication date: February 25, 2016
    Applicant: MCMASTER UNIVERSITY
    Inventors: John D. Brennan, Carlos Filipe, Robert Pelton, Zakir Hossain, Roger Luckham, Anne Marie Smith, Julie Lebert
  • Patent number: 9157109
    Abstract: Novel solid-phase biosensors that utilize ink jet printing of biocompatible sol-gel based inks to create sensor strips are reported herein. Biomolecules and other reagents useful in bioassays to detect, for example, pathogenic microorganisms or toxic substances, are immobilized on a substrate, which can be paper based, by layering these substances between two layers of biomolecule compatible sol gel. The sol gel precursor solutions and solutions of the assay reagents are printed from separate nozzles in a layered approach which avoids clogging of the nozzles by the pre-mature gelling of the sol gel precursor solution. In certain embodiments of the application, a capture agent is used to concentrate a compound to be detected in specific areas on the substrate to facilitate detection.
    Type: Grant
    Filed: May 31, 2010
    Date of Patent: October 13, 2015
    Assignee: McMaster University
    Inventors: John D. Brennan, Carlos Filipe, Zakir Hossain, Roger Luckham, Anne Marie Smith, Julie Marie Lebert, Robert Pelton
  • Publication number: 20120135437
    Abstract: Novel solid-phase biosensors that utilize ink jet printing of biocompatible sol-gel based inks to create sensor strips are reported herein. Biomolecules and other reagents useful in bioassays to detect, for example, pathogenic microorganisms or toxic substances, are immobilized on a substrate, which can be paper based, by layering these substances between two layers of biomolecule compatible sol gel. The sol gel precursor solutions and solutions of the assay reagents are printed from separate nozzles in a layered approach which avoids clogging of the nozzles by the pre-mature gelling of the sol gel precursor solution. In certain embodiments of the application, a capture agent is used to concentrate a compound to be detected in specific areas on the substrate to facilitate detection.
    Type: Application
    Filed: May 31, 2010
    Publication date: May 31, 2012
    Applicant: McMaster University
    Inventors: John D. Brennan, Carlos Fillipe, Zakir Hossaln, Roger Luckham, Anne Marie Smith, Julle Marie Lebert, Robert Pelton