Patents by Inventor John Sidney

John Sidney has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20260000710
    Abstract: Provided herein are engineered T cell receptor (TCR) proteins, nucleic acids, vectors, host cells, methods of treating atherosclerosis-related autoimmune disease, and chimeric antigen receptor expressing T cell (CAR-T) comprising a beta chain CDR3 selected from the amino acid sequence of SEQ ID NOS: 179 to 356 and an alpha chain, wherein the TCR is specific for a human apolipoprotein B (ApoB) epitope, antigen-MHC binding portions, and full-length versions of the same.
    Type: Application
    Filed: June 7, 2023
    Publication date: January 1, 2026
    Inventors: Klaus Ley, Payel Roy, Alessandro Sette, John Sidney
  • Publication number: 20250231185
    Abstract: The present disclosure includes compositions and methods for detecting the presence of: a coronavirus or an immune response relevant to a coronavirus infection including T cells responsive to one or more coronavirus peptides or proteins comprising, consisting of, or consisting essentially of: one or more amino acid sequences selected from those sequences set forth in Tables 1 to 10 (SEQ ID NOS: 1 to 3522), or a subsequence, portion, homologue, variant or derivative thereof; a fusion protein; a pool of 2 or more peptides; or a polynucleotide that encodes one or more peptides or proteins, comprising, consisting of, or consisting essentially of one or more amino acid sequences set forth in Tables 1 to 10 (SEQ ID NOS: 1 to 3522), or a subsequence, portion, homologue, variant or derivative thereof. The disclosure further provides vaccines, diagnostics, therapies, and kits, comprising such proteins or peptides.
    Type: Application
    Filed: May 12, 2022
    Publication date: July 17, 2025
    Inventors: Alessandro Sette, Shane Crotty, Bjoern Peters, John Sidney, Alba Grifoni, Daniela Weiskopf, Ricardo Da Silva Antunes
  • Publication number: 20230293630
    Abstract: The present invention includes compositions and methods for detecting the presence of: a coronavirus or an immune response to a coronavirus infection including T cells responsive to one or more coronavirus peptides or proteins comprising, consisting of, or consisting essentially of: one or more amino acid sequences selected from SEQ ID NO: 1 to 1126, subsequences, portions, homologues, variants or derivatives; a fusion protein comprising one or more amino acid sequences selected from SEQ ID NO: 1 to 1126; a pool of peptides or proteins selected from the amino acid sequences set forth in SEQ ID NO: 1 to 1126; or a polynucleotide that encodes one or more peptides or proteins, comprising, consisting of, or consisting essentially of an amino acid sequence selected from SEQ ID NO: 1 to 1126, subsequences, portions, homologues, variants or derivatives. The invention further provides vaccines, diagnostics, therapies, and kits, comprising such proteins or peptides.
    Type: Application
    Filed: February 11, 2021
    Publication date: September 21, 2023
    Inventors: Alessandro Sette, Shane Crotty, Alba Grifoni, Daniela Weiskopf, Bjoern Peters, John Sidney
  • Publication number: 20200289629
    Abstract: Disclosed herein are polynucleotides encoding multi-epitope polypeptides and assemblies thereof, and their use for treating or limiting Toxoplasma gondii infection.
    Type: Application
    Filed: June 3, 2020
    Publication date: September 17, 2020
    Inventors: Rima MCLEOD, Kamal EL BISSATI, Ying ZHOU, Jeff ALEXANDER, Lo VANG, Steve REED, Sara M. PAULILLO, Senthil K. RAMAN, Peter BURKHARD, Mariane MELO, Darrel IRVINE, Ron WEISS, Yuan ZHANG, Alessandro SETTE, John SIDNEY, Brian D. LIVINGSTON, Hernan LORENZI
  • Patent number: 10703784
    Abstract: The present invention relates to M. tuberculosis proteins and peptides, and subsequences, portions or modifications thereof and methods and compounds comprising the same for eliciting, stimulating, inducing, promoting, increasing, or enhancing an anti-M. tuberculosis immune response in a subject.
    Type: Grant
    Filed: October 1, 2012
    Date of Patent: July 7, 2020
    Assignee: LA JOLLA INSTITUTE FOR ALLERGY AND IMMUNOLOGY
    Inventors: Alessandro Sette, Cecilia Arlehamm, Bjoern Peters, Howard Grey, John Sidney
  • Publication number: 20190282679
    Abstract: Disclosed herein are polynucleotides encoding multi-epitope polypeptides and assemblies thereof, and their use for treating or limiting Toxoplasma gondii infection.
    Type: Application
    Filed: April 14, 2017
    Publication date: September 19, 2019
    Inventors: Rima MCLEOD, Kamal EL BISSATI, Ying ZHOU, Jeff ALEXANDER, Lo VANG, Steve REED, Sara M. PAULILLO, Senthil K. RAMAN, Peter BURKHARD, Mariane MELO, Darrel IRVINE, Ron WEISS, Yuan ZHANG, Alessandro SETTE, John SIDNEY, Brian D. LIVINGSTON, Hernan LORENZI
  • Patent number: 10059751
    Abstract: The invention relates to combinations of peptides or variants thereof derived from a portion of an amino sequence of a house dust mite allergen, e.g. the allergens Der p 1, Der f 1, Der p 2 and/or Der f 2. Such peptides comprise at least one T cell epitope and a significant high number of patients in a worldwide population will have HLA alleles with the potential to bind the peptides of the peptide combinations. The invention also relates to the use of such peptide combinations in relieving an immune response caused by a dust mite.
    Type: Grant
    Filed: December 23, 2014
    Date of Patent: August 28, 2018
    Assignees: ALK-ABELLĂ“ A/S, LA JOLLA INSTITUTE FOR ALLERGY AND IMMUNOGY
    Inventors: Claus Lundegaard, Lars Harder Christensen, Peter Adler Wurtzen, Alessandro Sette, John Sidney, Gitte Lund, Peter Sejer Andersen
  • Publication number: 20160251403
    Abstract: The invention relates to combinations of peptides or variants thereof derived from a portion of an amino sequence of CM a house dust mite allergen, e.g. the allergens Der p 1, Der f 1, Der p 2 and/or Der f 2. Such peptides comprise at least one T cell epitope and a significant high number of patients in a worldwide population will have HLA alleles with the potential to bind the peptides of the peptide combinations. The invention also relates to the use of such peptide combinations in relieving an immune response caused by a dust mite.
    Type: Application
    Filed: December 23, 2014
    Publication date: September 1, 2016
    Applicants: ALK-ABELLO A/S, LA JOLLA INSTITUTE FOR ALLERGY AND IMMUNOLOGY
    Inventors: Claus Lundegaard, Lars Harder Christensen, Peter Adler Wurtzen, Alessandro Sette, John Sidney, Gitte Lund
  • Publication number: 20160193316
    Abstract: This invention uses our knowledge of the mechanisms by which antigen is recognized by T cells to identify and prepare Plasmodium falciparum epitopes, and to develop epitope-based vaccines directed towards malaria. More specifically, this application communicates our discovery of pharmaceutical compositions and methods of use in the prevention and treatment of malaria. In particular, this application discloses isolated peptides comprising oligopeptides, for example the oligopeptides LLACAGLAY, FLIFFDLFLV, FMKAVCVEV, VLAGLLGNV, GLIMVLSFL, KILSVFFLA, GLLGNVSTV, VLLGGVGLVL, ILSVSSFLFV, QTNFKSLLR, LACAGLAYK, ALFFIIFNK, LLACAGLAYK, HVLSHNSYEK, FILVNLLIFH, FQDEENIGIY, PSDGKCNLY, YYIPHQSSL, FYFILVNLL, KYLVIVFLI and KYKLATSVL, or isolated peptides conjugated with T helper peptides that are used as antigens in epitope-based vaccines to prevent and/or treat malaria.
    Type: Application
    Filed: December 28, 2015
    Publication date: July 7, 2016
    Applicant: Epimmune Inc.
    Inventors: Alessandro Sette, John Sidney, Scott Southwood, Brian D. Livingston, Robert Chestnut, Denise Marie Baker, Esteban Celis, Ralph T. Kubo, Howard M. Grey
  • Patent number: 9340577
    Abstract: The present invention provides the means and methods for selecting immunogenic peptides and the immunogenic peptide compositions capable of specifically binding glycoproteins encoded by HLA alleles and inducing T cell activation in T cells restricted by the allele. One such peptide, NMLSTVLGV (SEQ ID NO: 183) is useful to elicit an immune response against influenza. The present invention also provides a heteropolymer of an isolated immunogenic peptide less than 15 amino acids in length comprising the oligopeptide NMLSTVLGV (SEQ ID NO: 183) and at least one different peptide.
    Type: Grant
    Filed: April 6, 2004
    Date of Patent: May 17, 2016
    Assignee: Epimmune Inc.
    Inventors: Howard M. Grey, Alessandro Sette, John Sidney, Scott Southwood, Ralph T. Kubo, Esteban Celis, Robert Chesnut, W. Martin Kast
  • Patent number: 9266930
    Abstract: This invention uses our knowledge of the mechanisms by which antigen is recognized by T cells to identify and prepare Plasmodium falciparum epitopes, and to develop epitope-based vaccines directed towards malaria. More specifically, this application communicates our discovery of pharmaceutical compositions and methods of use in the prevention and treatment of malaria. In particular, this application discloses isolated peptides comprising oligopeptides, for example the oligopeptide GVSENIFLK, or isolated peptides conjugated with T helper peptides that are used as antigens in epitope-based vaccines to prevent and/or treat malaria.
    Type: Grant
    Filed: September 3, 1999
    Date of Patent: February 23, 2016
    Assignee: Epimmune Inc.
    Inventors: Alessandro Sette, John Sidney, Scott Southwood, Brian D. Livingston, Robert Chestnut, Denise Marie Baker, Esteban Celis, Ralph T. Kubo, Howard M. Grey
  • Publication number: 20140147490
    Abstract: A composition or vaccine composition comprising at least one peptide that has less than 600 contiguous amino acids having 100% identity to a native sequence of CEA, HER2/neu, MAGE2, MAGE3, or p53, the peptide further comprising at least one epitope selected from Table 6.
    Type: Application
    Filed: October 29, 2012
    Publication date: May 29, 2014
    Inventors: John D. Fikes, Alessandro Sette, John Sidney, Scott Southwood, Esteban Celis, Elissa A. Keogh, Robert Chesnut
  • Publication number: 20130017253
    Abstract: This invention uses our knowledge of the mechanisms by which antigen is recognized by T cells to identify and prepare human papillomavirus (HPV) epitopes, and to develop epitope-based vaccines directed towards HPV. More specifically, this application communicates our discovery of pharmaceutical compositions and methods of use in the prevention and treatment of HPV infection.
    Type: Application
    Filed: September 14, 2012
    Publication date: January 17, 2013
    Inventors: Alessandro SETTE, John Sidney, Scott Southwood, Robert Chestnut, Esteban Celis, Howard M. Grey
  • Publication number: 20120015401
    Abstract: The subject invention provides novel Plasmodium falciparum antigens and novel polynucleotides encoding these antigens. Also provided by the subject invention are methods of using these antigens and polynucleotides.
    Type: Application
    Filed: July 25, 2011
    Publication date: January 19, 2012
    Applicants: U.S.A as Represented by the Secretary of the Navy, Office of Naval Research (Code 00CC), Epimmune Inc.
    Inventors: Alessandro Sette, Denise L. Doolan, Daniel J. Carucci, John Sidney, Scott Southwood
  • Publication number: 20110318408
    Abstract: A composition or vaccine composition comprising at least one peptide that has less than 600 contiguous amino acids having 100% identity to a native sequence of CEA, HER2/neu, MAGE2, MAGE3, or p53, the peptide further comprising at least one epitope selected from Table 6.
    Type: Application
    Filed: June 7, 2011
    Publication date: December 29, 2011
    Inventors: John D. Fikes, Alessandro Sette, John Sidney, Scott Southwood, Esteban Celis, Elissa A. Keogh, Robert Chesnut
  • Patent number: 8017745
    Abstract: The subject invention provides novel Plasmodium falciparum antigens and novel polynucleotides encoding these antigens. Also provided by the subject invention are methods of using these antigens and polynucleotides.
    Type: Grant
    Filed: December 8, 2003
    Date of Patent: September 13, 2011
    Assignees: Epimmune Inc., The United States of America as represented by the Secretary of the Navy
    Inventors: Alessandro Sette, Denise L. Doolan, Daniel J. Carucci, John Sidney, Scott Southwood
  • Publication number: 20110097352
    Abstract: This invention uses our knowledge of the mechanisms by which antigen is recognized by T cells to develop epitope-based vaccines directed towards HBV. More specifically, this application communicates our discovery of pharmaceutical compositions and methods of use in the prevention and treatment of HBV infection.
    Type: Application
    Filed: October 30, 2007
    Publication date: April 28, 2011
    Applicant: Pharmexa Inc.
    Inventors: Alessandro Sette, John Sidney, Scott Southwood, Maria A. Vitiello, Brian D. Livingston, Esteban Celis, Ralph T. Kubo, Howard M. Grey, Robert W. Chesnut
  • Publication number: 20100099613
    Abstract: The present invention is directed to peptides, and nucleic acids encoding them, derived from the Hepatitis C Virus (HCV). The peptides are those which elicit a CTL and/or HTL response in a host. The invention is also directed to compositions and vaccines for prevention and treatment of HCV infection and diagnostic methods for detection of HCV exposure in patients.
    Type: Application
    Filed: October 6, 2009
    Publication date: April 22, 2010
    Applicants: GENIMMUNE, PHARMEXA INC.
    Inventors: Marie-Ange Buyse, Geert Maertens, Erik Depla, Ignace Lasters, Johan Desmet, Denise Baker, Robert W. Chesnut, Mark Newman, Alessandra Sette, John Sidney, Scott Southwood
  • Publication number: 20100068228
    Abstract: This invention uses our knowledge of the mechanisms by which antigen is recognized by T cells to develop epitope-based vaccines directed towards HBV. More specifically, this application communicates our discovery of pharmaceutical compositions and methods of use in the prevention and treatment of HBV infection.
    Type: Application
    Filed: August 5, 2009
    Publication date: March 18, 2010
    Applicant: Pharmexa Inc.
    Inventors: Alessandro SETTE, John Sidney, Scott Southwood, Maria Vitiello, Brian Livingston, Esteban Celis, Ralph Kubo, Howard Grey, Robert Chesnut
  • Publication number: 20090311283
    Abstract: This invention uses our knowledge of the mechanisms by which antigen is recognized by T cells to develop epitope-based vaccines directed towards HBV. More specifically, this application communicates our discovery of pharmaceutical compositions and methods of use in the prevention and treatment of HBV infection.
    Type: Application
    Filed: October 30, 2007
    Publication date: December 17, 2009
    Applicant: Pharmexa Inc.
    Inventors: Alessandro Sette, John Sidney, Scott Southwood, Maria A. Vitiello, Brian D. Livingston, Esteban Celis, Ralph T. Kubo, Howard M. Grey, Robert W. Chesnut