Patents by Inventor Jonathan C. Moore

Jonathan C. Moore has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240068005
    Abstract: The present invention provides engineered ketoreductase and phosphite dehydrogenase enzymes having improved properties as compared to a naturally occurring wild-type ketoreductase and phosphite dehydrogenase enzymes, as well as polynucleotides encoding the engineered ketoreductase and phosphite dehydrogenase enzymes, host cells capable of expressing the engineered ketoreductase and phosphite dehydrogenase enzymes, and methods of using the engineered ketoreductase and phosphite dehydrogenase enzymes to synthesize a chiral catalyst used in the synthesis of antiviral compounds, such as nucleoside inhibitors. The present invention further provides methods of using the engineered enzymes to deracemize a chiral alcohol in a one-pot, multi-enzyme system.
    Type: Application
    Filed: July 14, 2023
    Publication date: February 29, 2024
    Inventors: Jeffrey C. Moore, Jack Liang, Jonathan Penfield, Jovana Nazor, Nikki Dellas, Vesna Mitchell, Da Duan, Iman Farasat, Agustina Rodriguez-Granillo, Grant Murphy, Nicholas Marshall
  • Patent number: 10287611
    Abstract: This invention relates to biocatalysts for the efficient production of succinic acid and/or other products from renewable biological feedstocks. The biocatalysts have a very high efficiency for the growth-coupled production of succinic acid and/or other products from carbohydrate feed stocks as a result of both genetic manipulation and metabolic evolution. More specifically, certain biocatalysts of the present invention produce succinic acid at high titers and yields in mineral salts media during simple pH-controlled batch fermentation without the addition of any exogenous genetic material. The genetic manipulations of the present invention are concerned with energy-conserving strategies coupled with the elimination of alternative routes for NADH oxidation other than the routes for succinic acid production. The biocatalysts contain glucose-repressed gluconeogenic phosphoenolpyruvate carboxykinase (pck) derepressed by genetic modifications and a genetically-inactivated phosphotransferase system.
    Type: Grant
    Filed: May 6, 2015
    Date of Patent: May 14, 2019
    Assignee: University of Florida Research Foundation, Incorporated
    Inventors: Xueli Zhang, Kaemwich Jantama, Jonathan C. Moore, Laura R. Jarboe, Keelnatham T. Shanmugam, Lonnie O'Neal Ingram
  • Publication number: 20150284746
    Abstract: This invention relates to the biocatalysts for the efficient production of succinic acid and/or other products from renewable biological feedstocks. The biocatalysts have a very high efficiency for the growth-coupled production of succinic acid and/or other products from carbohydrate feed stocks as a result of both genetic manipulations and metabolic evolution. More specifically, certain biocatalysts of the present invention produce succinic acid at high titers and yield in mineral salts media during simple pH-controlled, batch fermentation without the addition of any exogenous genetic material. The genetic manipulations of the present invention are concerned with the energy-conserving strategies coupled with the elimination of alternative routes for NADH oxidation other than the routes for succinic acid production. The biocatalysts contain glucose-repressed gluconeogenic phosphoenol pyruvate carboxykinase (pck) derepressed by genetic modifications and a genetically-inactivated phosphotransferase system.
    Type: Application
    Filed: May 6, 2015
    Publication date: October 8, 2015
    Inventors: XUELI ZHANG, KAEMWICH JANTAMA, JONATHAN C. MOORE, LAURA R. JARBOE, KEELNATHAM T. SHANMUGAM, LONNIE O'NEAL INGRAM
  • Patent number: 8691539
    Abstract: Genetically engineered microorganisms have been constructed to produce succinate and malate in mineral salt media in pH-controlled batch fermentations without the addition of plasmids or foreign genes. The subject invention also provides methods of producing succinate and malate comprising the culture of genetically modified microorganisms.
    Type: Grant
    Filed: March 19, 2008
    Date of Patent: April 8, 2014
    Assignee: University of Florida Research Foundation, Inc.
    Inventors: Kaemwich Jantama, Mark John Haupt, Xueli Zhang, Jonathan C. Moore, Keelnatham T. Shanmugam, Lonnie O'Neal Ingram
  • Patent number: 8426191
    Abstract: The present invention provides derivatives of Escherichia coli constructed for the production of lactic acid. The transformed E. coli of the invention are prepared by deleting the genes that encode competing pathways followed by a growth-based selection for mutants with improved performance. These transformed E. coli are useful for providing an increased supply of lactic acid for use in food and industrial applications.
    Type: Grant
    Filed: December 7, 2009
    Date of Patent: April 23, 2013
    Assignee: University of Florida Research Foundation, Inc.
    Inventors: Shengde Zhou, Lonnie O'Neal Ingram, Keelnatham T. Shanmugam, Lorraine Yomano, Tammy B. Grabar, Jonathan C. Moore
  • Publication number: 20120058530
    Abstract: This invention relates to the biocatalysts for the efficient production of succinic acid and/or other products from renewable biological feedstocks. The biocatalysts have a very high efficiency for the growth-coupled production of succinic acid and/or other products from carbohydrate feed stocks as a result of both genetic manipulations and metabolic evolution. More specifically, certain biocatalysts of the present invention produce succinic acid at high titers and yield in mineral salts media during simple pH-controlled, batch fermentation without the addition of any exogenous genetic material. The genetic manipulations of the present invention are concerned with the energy-conserving strategies coupled with the elimination of alternative routes for NADH oxidation other than the routes for succinic acid production. The biocatalysts contain glucose-repressed gluconeogenic phosphoenol pyruvate carboxykinase (pck) depressed by genetic modifications and a genetically-inactivated phosphotransferase system.
    Type: Application
    Filed: April 2, 2010
    Publication date: March 8, 2012
    Applicant: UNIVERSITY OF FLORIDA RESEARCH FOUNDATION INC.
    Inventors: Xueli Zhang, Kaemwich Jantama, Jonathan C. Moore, Laura R. Jarboe, Keelnatham T. Shanmugam, Lonnie O'Neal Ingram
  • Patent number: 8124259
    Abstract: A microbial fuel cell (100) includes an anode compartment (110) including an anode (115) and anolyte (120). The anolyte (120) comprises a plurality of in-vivo cells (125) mixed with a plurality of electrically conducting nano or micro-scale fibers (128), wherein at least a portion of the plurality of electrically conducting fibers (128) are in electrical contact with a surface of the anode (115). A cathode compartment (140) includes a cathode (145) and a catholyte (150). A cation-exchange membrane (155) is disposed between the anode compartment (110) and the cathode compartment (140).
    Type: Grant
    Filed: October 20, 2005
    Date of Patent: February 28, 2012
    Assignee: University of Florida Research Foundation, Inc.
    Inventors: Andrew G. Rinzler, Lonnie O'Neal Ingram, Keelnatham T. Shanmugam, Jonathan C. Moore, Zhuangchun Wu
  • Publication number: 20100203602
    Abstract: The present invention provides derivatives of Escherichia coli constructed for the production of lactic acid. The transformed E. coli of the invention are prepared by deleting the genes that encode competing pathways followed by a growth-based selection for mutants with improved performance. These transformed E. coli are useful for providing an increased supply of lactic acid for use in food and industrial applications.
    Type: Application
    Filed: December 7, 2009
    Publication date: August 12, 2010
    Applicant: UNIVERSITY OF FLORIDA RESEARCH FOUNDATION, INC.
    Inventors: SHENGDE ZHOU, LONNIE O'NEAL INGRAM, KEELNATHAM T. SHANMUGAM, LORRAINE YOMANO, TAMMY B. GRABAR, JONATHAN C. MOORE
  • Publication number: 20100184171
    Abstract: Genetically engineered microorganisms have been constructed to produce succinate and malate in mineral salt media in pH-controlled batch fermentations without the addition of plasmids or foreign genes. The subject invention also provides methods of producing succinate and malate comprising the culture of genetically modified microorganisms.
    Type: Application
    Filed: March 19, 2008
    Publication date: July 22, 2010
    Inventors: Kaemwich Jantama, Mark John Haupt, Xueli Zhang, Jonathan C. Moore, Keelnatham T. Shanmugam, Lonnie O'Neal Ingram
  • Patent number: 7629162
    Abstract: The present invention provides derivatives of ethanologenic Escherichia coli K011 constructed for the production of lactic acid. The transformed E. coli of the invention are prepared by deleting the genes that encode competing pathways followed by a growth-based selection for mutants with improved performance. These transformed E. coli are useful for providing an increased supply of lactic acid for use in food and industrial applications.
    Type: Grant
    Filed: August 8, 2006
    Date of Patent: December 8, 2009
    Assignee: University of Florida Research Foundation, Inc.
    Inventors: Shengde Zhou, Lonnie O'Neal Ingram, Keelnatham T. Shanmugam, Lorraine Yomano, Tammy B. Grabar, Jonathan C. Moore
  • Publication number: 20080261083
    Abstract: A microbial fuel cell (100) includes an anode compartment (110) including an anode (115) and anolyte (120). The anolyte (120) comprises a plurality of in-vivo cells (125) mixed with a plurality of electrically conducting nano or micro-scale fibers (128), wherein at least a portion of the plurality of electrically conducting fibers (128) are in electrical contact with a surface of the anode (115). A cathode compartment (140) includes a cathode (145) and a catholyte (150). A cation-exchange membrane (155) is disposed between the anode compartment (110) and the cathode compartment (140).
    Type: Application
    Filed: October 20, 2005
    Publication date: October 23, 2008
    Applicant: University of Florida Research Foundation, Inc.
    Inventors: Andrew G. Rinzler, Lonnie O'Neal Ingram, Keelnatham T. Shanmugam, Jonathan C. Moore, Zhuangchun Wu