Patents by Inventor Jonathan F. Smith

Jonathan F. Smith has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 7078218
    Abstract: Provided herein are methods for producing alphavirus replicon particles in high yield; replicon RNAs are electroporated into permissive cells, where the cells are at a relatively high density, together with at least one helper nucleic acid providing the necessary functions for packaging. After a growth period in appropriate medium, alphavirus replicon particles are harvested from the surfaces of the cells in which they were produced using a salt wash in which the salt concentration is from about 0.2 to about 5 M sodium chloride, calcium chloride, magnesium chloride, potassium chloride, ammonium acetate, ammonium bicarbonate, among others. After dilution, if necessary, the particles can be purified by a suitable chromatographic technique.
    Type: Grant
    Filed: December 12, 2003
    Date of Patent: July 18, 2006
    Assignee: AlphaVax, Inc.
    Inventors: Jonathan F. Smith, Kurt Kamrud, Sergey Dryga, Harold Alterson, Jon Rayner, Kim Butler, Maureen F. Maughan
  • Patent number: 7052209
    Abstract: An arch shape cross section chamber for receiving and dispersing stormwater when buried beneath the surface of the earth is corrugated and has a cross section geometry which is a continuous curve. Preferably, the curve is a truncated semi-ellipse. A chamber also has a combination of a standard corrugations along most of the length, in combination with smaller end corrugation with standard corrugations, to enable joining of chambers in overlap fashion, as a string; corrugations which have elliptically curved corrugation widths when viewed from the side of the chamber; and, sidewall base flanges which have turned up outer edges in combination with fins which connect said edges with the curved chamber sidewall. A domed end cap is adapted to both close the end of the chamber and to be positioned within the chamber length to provide a baffle.
    Type: Grant
    Filed: March 28, 2003
    Date of Patent: May 30, 2006
    Assignee: Infiltrator Systems, Inc.
    Inventors: Kurt J. Kruger, Jonathan F. Smith, Bryan F. Coppes, Raymond Connors
  • Patent number: 7045335
    Abstract: The present invention provides compositions useful in and methods for producing populations of infectious, replication-defective alphavirus replicon particles that contain no replication-competent alphavirus particles, as determined by passage on cells in culture. The compositions include helper and replicon nucleic acid molecules that can further reduce the predicted frequency for formation of replication-competent virus and can optimize manufacturing strategies and costs.
    Type: Grant
    Filed: September 6, 2002
    Date of Patent: May 16, 2006
    Assignee: Alphavax, Inc.
    Inventors: Jonathan F. Smith, Kurt I. Kamrud, Jonathan O. Rayner, Sergey A. Dryga, Ian J. Caley
  • Patent number: 6991734
    Abstract: Apparatus for receiving and dispersing stormwater beneath the earth surface is comprised of an array of chambers, preferably having arch shape cross section, buried in crushed stone. Surface stormwater flows first through a diverter, then into a solids retention subsystem (SRS), and then into the array of chambers, which is spaced apart in the stone from the SRS. The SRS chambers are layered with geotextile or other filtering media. Solids entrained in the stormwater are retained in the SRS by a combination of settling and filtering actions. If the stormwater inflow exceeds the capacity of the SRS, the water level rises in the diverter to the point where it flows through a bypass line, directly to the chambers of the array.
    Type: Grant
    Filed: March 31, 2004
    Date of Patent: January 31, 2006
    Assignee: Infiltrator Systems INC
    Inventors: Jonathan F. Smith, Bryan A. Coppes
  • Patent number: 6984504
    Abstract: Using the Ebola GP, NP, VP24, VP30, VP35 and VP40 virion proteins, a method and composition for use in inducing an immune response which is protective against infection with Ebola virus is described.
    Type: Grant
    Filed: October 29, 2003
    Date of Patent: January 10, 2006
    Assignee: The United States of America as represented by the Secretary of the Army
    Inventors: Mary K. Hart, Julie A. Wilson, Peter Pushko, Jonathan F. Smith, Alan L. Schmaljohn
  • Publication number: 20040208848
    Abstract: Viral replicon selected nucleic acid expression libraries are useful for analyzing multiple antigens associated with a parasite, pathogen or neoplasia or for preparing immunogenic compositions for generating immune responses specific for the parasite, pathogen or neoplasia. Alphavirus replicon particles representative of the nucleic acid expression library are preferred. The nucleic acid library can be a random library, or it can be prepared after a selection step, for example, by differential hybridization prior to cloning into the replicon vector.
    Type: Application
    Filed: December 12, 2003
    Publication date: October 21, 2004
    Inventors: Jonathan F. Smith, Kurt Kamrud, Sergey Dryga, Ian Caley
  • Publication number: 20040166573
    Abstract: Provided herein are methods for producing alphavirus replicon particles in high yield; replicon RNAs are electroporated into permissive cells, where the cells are at a relatively high density, together with at least one helper nucleic acid providing the necessary functions for packaging. After a growth period in appropriate medium, alphavirus replicon particles are harvested from the surfaces of the cells in which they were produced using a salt wash in which the salt concentration is from about 0.2 to about 5 M sodium chloride, calcium chloride, magnesium chloride, potassium chloride, ammonium acetate, ammonium bicarbonate, among others. After dilution, if necessary, the particles can be purified by a suitable chromatographic technique.
    Type: Application
    Filed: December 12, 2003
    Publication date: August 26, 2004
    Inventors: Jonathan F. Smith, Kurt Kamrud, Sergey Dryga, Harold Alterson, Jon Rayner, Kim Butler, Maureen F. Maughan
  • Patent number: 6770479
    Abstract: Using the nontoxic PA protein from B. anthracis, a method and composition for use in inducing an immune response which is protective against anthrax in subjects is described.
    Type: Grant
    Filed: July 9, 1999
    Date of Patent: August 3, 2004
    Assignee: The United States of America as represented by the Secretary of the Army
    Inventors: John S. Lee, Peter Pushko, Michael D. Parker, Jonathan F. Smith, Susan L. Welkos
  • Publication number: 20040146859
    Abstract: Using the Ebola GP, NP, VP24, VP30, VP35 and VP40 virion proteins, a method and composition for use in inducing an immune response which is protective against infection with Ebola virus is described.
    Type: Application
    Filed: October 29, 2003
    Publication date: July 29, 2004
    Inventors: Mary K. Hart, Julie A. Wilson, Peter Pushko, Jonathan F. Smith, Alan L. Schmaljohn
  • Publication number: 20040121466
    Abstract: The present invention provides a helper cell for expressing an infectious, replication defective, alphavirus particle in an alphavirus-permissive cell. The helper cell includes (a) a first helper RNA encoding (i) at least one alphavirus structural protein, and (ii) not encoding at least one alphavirus structural protein; and (b) a second helper RNA separate from the first helper RNA, the second helper RNA (i) not encoding the alphavirus structural protein encoded by the first helper RNA, and (ii) encoding the at least one alphavirus structural protein not encoded by the first helper RNA. Preferably, the helper cell is co-transfected with a replicon RNA encoding an alphavirus packaging segment and an inserted heterogeneous RNA, such that all of the alphavirus structural proteins assemble together into alphavirus particles in the cell, with said replicon RNA packaged therein.
    Type: Application
    Filed: October 10, 2003
    Publication date: June 24, 2004
    Applicant: University of North Carolina at Chapel Hill
    Inventors: Robert E. Johnston, Nancy L. Davis, Jonathan F. Smith, Peter Pushko, Michael Parker, George Ludwig
  • Publication number: 20040009183
    Abstract: Using nucleic acids encoding mutant SEA and SEB exotoxins from Staphylococcus aureus, compositions and methods for use in inducing an immune response which is protective against staphylococcal aureus intoxication in subjects is described.
    Type: Application
    Filed: April 2, 2003
    Publication date: January 15, 2004
    Inventors: John S. Lee, Peter Pushko, Jonathan F. Smith, Robert G. Ulrich
  • Publication number: 20040009945
    Abstract: Using the nontoxic PA protein from B. anthracis, a method and composition for use in inducing an immune response which is protective against anthrax in subjects is described.
    Type: Application
    Filed: May 21, 2003
    Publication date: January 15, 2004
    Inventors: John S. Lee, Peter Pushko, Michael D. Parker, Jonathan F. Smith, Susan L. Welkos
  • Publication number: 20030232036
    Abstract: The present invention provides a helper cell for expressing an infectious, replication defective, alphavirus particle in an alphavirus-permissive cell. The helper cell includes (a) a first helper RNA encoding (i) at least one alphavirus structural protein, and (ii) not encoding at least one alphavirus structural protein; and (b) a second helper RNA separate from the first helper RNA, the second helper RNA (i) not encoding the alphavirus structural protein encoded by the first helper RNA, and (ii) encoding the at least alphavirus one structural protein not encoded by the first helper RNA, such that all of the alphavirus structural proteins assemble together into alphavirus particles in the cell. Preferably, the helper cell also includes a replicon RNA encoding an alphavirus packaging sequence and an inserted heterogeneous RNA.
    Type: Application
    Filed: March 13, 2003
    Publication date: December 18, 2003
    Inventors: Robert E. Johnston, Nancy L. Davis, Jonathan F. Smith, Peter Pushko, Michael Parker, George Ludwig
  • Patent number: 6632640
    Abstract: Using nucleic acids encoding mutant SEA and SEB exotoxins from Staphylococcus aureus, compositions and methods for use in inducing an immune response which is protective against staphylococcal aureus intoxication in subjects is described.
    Type: Grant
    Filed: July 9, 1999
    Date of Patent: October 14, 2003
    Assignee: The United States of America as represented by the Secretary of the Army
    Inventors: John S. Lee, Peter Pushko, Jonathan F. Smith, Robert G. Ulrich
  • Publication number: 20030152590
    Abstract: Using the MBGV GP, NP, and virion proteins, a method and composition for use in inducing an immune response which is protective against infection with MBGV in nonhuman primates is described.
    Type: Application
    Filed: October 9, 2002
    Publication date: August 14, 2003
    Inventors: Michael C. Hevey, Diane L. Negley, Peter Pushko, Jonathan F. Smith, Alan L. Schmaljohn
  • Publication number: 20030119182
    Abstract: The present invention provides compositions useful in and methods for producing populations of infectious, replication-defective alphavirus replicon particles that contain no replication-competent alphavirus particles, as determined by passage on cells in culture. The compositions include helper and replicon nucleic acid molecules that can further reduce the predicted frequency for formation of replication-competent virus and can optimize manufacturing strategies and costs.
    Type: Application
    Filed: September 6, 2002
    Publication date: June 26, 2003
    Inventors: Jonathan F. Smith, Kurt I. Kamrud, Jonathan O. Rayner, Sergey A. Dryga, Ian J. Caley
  • Patent number: 6541010
    Abstract: The present invention provides a helper cell for expressing an infectious, replication defective, alphavirus particle in an alphavirus-permissive cell. The helper cell includes (a) a first helper RNA encoding (i) at least one alphavirus structural protein, and (ii) not encoding at least one alphavirus structural protein; and (b) a second helper RNA separate from the first helper RNA, the second helper RNA (i) not encoding the alphavirus structural protein encoded by the first helper RNA, and (ii) encoding the at least one alphavirus structural protein not encoded by the first helper RNA. Preferably, the helper cell is co-transfected with a replicon RNA encoding an alphavirus packaging segment and an inserted heterogeneous RNA, such that all of the alphavirus structural proteins assemble together into alphavirus particles in the cell, with said replicon RNA packaged therein.
    Type: Grant
    Filed: November 10, 1997
    Date of Patent: April 1, 2003
    Assignee: The University of North Carolina at Chapel Hill
    Inventors: Robert E. Johnston, Nancy L. Davis, Jonathan F. Smith, Peter Pushko, Michael Parker, George Ludwig
  • Patent number: 6531135
    Abstract: The present invention provides a helper cell for expressing an infectious, replication defective, alphavirus particle in an alphavirus-permissive cell. The helper cell includes (a) a first helper RNA encoding (i) at least one alphavirus structural protein, and (ii) not encoding at least one alphavirus structural protein; and (b) a second helper RNA separate from the first helper RNA, the second helper RNA (i) not encoding the alphavirus structural protein encoded by the first helper RNA, and (ii) encoding the at least alphavirus one structural protein not encoded by the first helper RNA, such that all of the alphavirus structural proteins assemble together into alphavirus particles in the cell. Preferably, the helper cell also includes a replicon RNA encoding an alphavirus packaging sequence and an inserted heterogeneous RNA.
    Type: Grant
    Filed: June 21, 2000
    Date of Patent: March 11, 2003
    Assignee: The University of North Carolina at Chapel Hill
    Inventors: Robert E. Johnston, Nancy L. Davis, Jonathan F. Smith, Peter Pushko, Michael Parker, George Ludwig
  • Patent number: 6521235
    Abstract: The present invention provides a helper cell for expressing an infectious, replication defective, alphavirus particle in an alphavirus-permissive cell. The helper cell includes (a) a first helper RNA encoding (i) at least one alphavirus structural protein, and (ii) not encoding at least one alphavirus structural protein; and (b) a second helper RNA separate from the first helper RNA, the second helper RNA (i) not encoding the alphavirus structural protein encoded by the first helper RNA, and (ii) encoding the at least one alphavirus structural protein not encoded by the first helper RNA. Preferably, the helper cell is co-transfected with a replicon RNA encoding an alphavirus packaging segment and an inserted heterogeneous RNA, such that all of the alphavirus structural proteins assemble together into alphavirus particles in the cell, with said replicon RNA packaged therein.
    Type: Grant
    Filed: March 9, 2001
    Date of Patent: February 18, 2003
    Assignee: The University of North Carolina at Chapel Hill
    Inventors: Robert E. Johnston, Nancy L. Davis, Jonathan F. Smith, Peter Pushko, Michael Parker, George Ludwig
  • Patent number: 6517842
    Abstract: The invention here relates to recombinant DNA constructs which comprise a Venezuelan equine encephalitis replicon vector and at least one DNA fragment encoding a protective antigen from the Marburg virus. The DNA constructs are useful for inducing an immune response which is protective against infection with Marburg virus in nonhuman primates.
    Type: Grant
    Filed: June 21, 1999
    Date of Patent: February 11, 2003
    Assignee: The United States of America as represented by the Secretary of the Army
    Inventors: Michael C. Hevey, Diane L. Negley, Peter Pushko, Jonathan F. Smith, Alan L. Schmaljohn